FFCP PHASE1:Mm9::chr1:79432827..79432840,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=608|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:79432827..79432840,-|id=chr1:79432827..79432840,-|ontology_enrichment_celltype=CL:0000117!6.16e-09!23;CL:0000337!6.16e-09!23;CL:0000540!5.09e-08!33;CL:0000047!5.09e-08!33;CL:0000031!5.09e-08!33;CL:0000404!5.09e-08!33;CL:0000393!7.07e-07!39;CL:0000211!7.07e-07!39|ontology_enrichment_celltype_v019_2=CL:0002614,6.18e-11,3;CL:0000117,8.25e-08,23;CL:0000337,8.25e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.34e-37!71;UBERON:0003075!1.34e-37!71;UBERON:0007284!1.34e-37!71;UBERON:0004121!1.42e-31!102;UBERON:0000924!1.42e-31!102;UBERON:0006601!1.42e-31!102;UBERON:0000073!2.12e-30!75;UBERON:0001016!2.12e-30!75;UBERON:0001049!2.58e-30!52;UBERON:0005068!2.58e-30!52;UBERON:0006241!2.58e-30!52;UBERON:0007135!2.58e-30!52;UBERON:0001017!2.93e-30!73;UBERON:0005743!2.93e-30!73;UBERON:0000955!7.49e-29!50;UBERON:0006238!7.49e-29!50;UBERON:0002616!1.43e-27!49;UBERON:0000033!4.49e-26!63;UBERON:0003080!4.95e-25!40;UBERON:0003056!1.44e-24!49;UBERON:0002780!4.90e-24!39;UBERON:0001890!4.90e-24!39;UBERON:0006240!4.90e-24!39;UBERON:0002020!2.66e-18!34;UBERON:0007811!8.85e-17!86;UBERON:0002791!4.15e-15!29;UBERON:0003528!4.15e-15!29;UBERON:0001893!4.15e-15!29;UBERON:0000153!2.48e-14!94;UBERON:0002021!3.23e-14!10;UBERON:0000411!3.23e-14!10;UBERON:0001950!3.23e-14!10;UBERON:0000007!1.36e-10!8;UBERON:0003296!1.36e-10!8;UBERON:0010133!1.36e-10!8;UBERON:0001894!3.32e-10!10;UBERON:0006222!3.32e-10!10;UBERON:0002619!4.39e-10!17;UBERON:0000956!9.06e-09!21;UBERON:0001869!9.06e-09!21;UBERON:0000203!9.06e-09!21;UBERON:0002298!9.44e-09!6;UBERON:0000025!2.38e-08!114;UBERON:0002420!3.30e-08!8;UBERON:0007245!3.30e-08!8;UBERON:0010009!3.30e-08!8;UBERON:0010011!3.30e-08!8;UBERON:0000454!3.30e-08!8;UBERON:0000475!1.05e-07!200;UBERON:0002342!2.01e-07!10;UBERON:0005062!2.01e-07!10;UBERON:0000483!3.03e-07!181;UBERON:0004111!3.91e-07!122;UBERON:0000119!5.07e-07!183|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.67e-27,54;UBERON:0002021,2.81e-24,10;UBERON:0000411,2.81e-24,10;UBERON:0001950,2.81e-24,10;UBERON:0000955,4.39e-23,47;UBERON:0006238,4.39e-23,47;UBERON:0002780,5.92e-23,39;UBERON:0001890,5.92e-23,39;UBERON:0006240,5.92e-23,39;UBERON:0001049,1.19e-22,52;UBERON:0005068,1.19e-22,52;UBERON:0006241,1.19e-22,52;UBERON:0007135,1.19e-22,52;UBERON:0001017,1.31e-22,73;UBERON:0003080,2.76e-22,40;UBERON:0001016,7.03e-22,75;UBERON:0002616,4.03e-21,46;UBERON:0002020,1.65e-20,34;UBERON:0003528,1.04e-18,29;UBERON:0002791,1.04e-18,29;UBERON:0001893,1.04e-18,29;UBERON:0002346,1.33e-17,64;UBERON:0003075,1.33e-17,64;UBERON:0007284,1.33e-17,64;UBERON:0003056,1.68e-17,49;UBERON:0010314,1.35e-16,92;UBERON:0004121,2.91e-16,95;UBERON:0000924,2.91e-16,95;UBERON:0006601,2.91e-16,95;UBERON:0010371,6.63e-15,73;UBERON:0002619,1.19e-13,17;UBERON:0002038,6.18e-11,3;UBERON:0009663,6.18e-11,3;UBERON:0009661,6.18e-11,3;UBERON:0000125,6.18e-11,3;UBERON:0002308,6.18e-11,3;UBERON:0000956,9.27e-11,21;UBERON:0001869,9.27e-11,21;UBERON:0000203,9.27e-11,21;UBERON:0002420,7.29e-10,8;UBERON:0007245,7.29e-10,8;UBERON:0010009,7.29e-10,8;UBERON:0010011,7.29e-10,8;UBERON:0000454,7.29e-10,8;UBERON:0002950,2.70e-08,4;UBERON:0001891,2.70e-08,4;UBERON:0009616,2.70e-08,4;UBERON:0010286,2.70e-08,4;UBERON:0000025,5.35e-08,114;UBERON:0004111,3.41e-07,122;UBERON:0002369,6.68e-07,7;UBERON:0006858,6.68e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0.191690942036473,0,0,3.83062014255563,4.76180253094355,0,0.457438218012048,1.04182674111352,3.07101298901519,3.93933827022176,5.19514042441154,1.47314292736834,1.13897344639282,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,3.56261133755579,0.173485326766136,0,0.691846491768175,1.05505848386836,1.05829836422134,1.0053327306374,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.449371918214468,1.37250180845588,0.125654352112864,0.173824320192276,0,0,0.648965052271031,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.05490517932983,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,1.18586333383957,2.24924921495265,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,5.10659408630682,0.720244376125241,0.129358683782755,0.857348140126369,0.709360934569094,1.60531935841864,2.30368628842969,1.8267896946876,0,0,0,0,0,0,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=608 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:79432827..79432840,- | |||
|id=chr1:79432827..79432840,- | |||
|ontology_enrichment_celltype=CL:0000117!6.16e-09!23;CL:0000337!6.16e-09!23;CL:0000540!5.09e-08!33;CL:0000047!5.09e-08!33;CL:0000031!5.09e-08!33;CL:0000404!5.09e-08!33;CL:0000393!7.07e-07!39;CL:0000211!7.07e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,6.18e-11,3;CL:0000117,8.25e-08,23;CL:0000337,8.25e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.34e-37!71;UBERON:0003075!1.34e-37!71;UBERON:0007284!1.34e-37!71;UBERON:0004121!1.42e-31!102;UBERON:0000924!1.42e-31!102;UBERON:0006601!1.42e-31!102;UBERON:0000073!2.12e-30!75;UBERON:0001016!2.12e-30!75;UBERON:0001049!2.58e-30!52;UBERON:0005068!2.58e-30!52;UBERON:0006241!2.58e-30!52;UBERON:0007135!2.58e-30!52;UBERON:0001017!2.93e-30!73;UBERON:0005743!2.93e-30!73;UBERON:0000955!7.49e-29!50;UBERON:0006238!7.49e-29!50;UBERON:0002616!1.43e-27!49;UBERON:0000033!4.49e-26!63;UBERON:0003080!4.95e-25!40;UBERON:0003056!1.44e-24!49;UBERON:0002780!4.90e-24!39;UBERON:0001890!4.90e-24!39;UBERON:0006240!4.90e-24!39;UBERON:0002020!2.66e-18!34;UBERON:0007811!8.85e-17!86;UBERON:0002791!4.15e-15!29;UBERON:0003528!4.15e-15!29;UBERON:0001893!4.15e-15!29;UBERON:0000153!2.48e-14!94;UBERON:0002021!3.23e-14!10;UBERON:0000411!3.23e-14!10;UBERON:0001950!3.23e-14!10;UBERON:0000007!1.36e-10!8;UBERON:0003296!1.36e-10!8;UBERON:0010133!1.36e-10!8;UBERON:0001894!3.32e-10!10;UBERON:0006222!3.32e-10!10;UBERON:0002619!4.39e-10!17;UBERON:0000956!9.06e-09!21;UBERON:0001869!9.06e-09!21;UBERON:0000203!9.06e-09!21;UBERON:0002298!9.44e-09!6;UBERON:0000025!2.38e-08!114;UBERON:0002420!3.30e-08!8;UBERON:0007245!3.30e-08!8;UBERON:0010009!3.30e-08!8;UBERON:0010011!3.30e-08!8;UBERON:0000454!3.30e-08!8;UBERON:0000475!1.05e-07!200;UBERON:0002342!2.01e-07!10;UBERON:0005062!2.01e-07!10;UBERON:0000483!3.03e-07!181;UBERON:0004111!3.91e-07!122;UBERON:0000119!5.07e-07!183 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.67e-27,54;UBERON:0002021,2.81e-24,10;UBERON:0000411,2.81e-24,10;UBERON:0001950,2.81e-24,10;UBERON:0000955,4.39e-23,47;UBERON:0006238,4.39e-23,47;UBERON:0002780,5.92e-23,39;UBERON:0001890,5.92e-23,39;UBERON:0006240,5.92e-23,39;UBERON:0001049,1.19e-22,52;UBERON:0005068,1.19e-22,52;UBERON:0006241,1.19e-22,52;UBERON:0007135,1.19e-22,52;UBERON:0001017,1.31e-22,73;UBERON:0003080,2.76e-22,40;UBERON:0001016,7.03e-22,75;UBERON:0002616,4.03e-21,46;UBERON:0002020,1.65e-20,34;UBERON:0003528,1.04e-18,29;UBERON:0002791,1.04e-18,29;UBERON:0001893,1.04e-18,29;UBERON:0002346,1.33e-17,64;UBERON:0003075,1.33e-17,64;UBERON:0007284,1.33e-17,64;UBERON:0003056,1.68e-17,49;UBERON:0010314,1.35e-16,92;UBERON:0004121,2.91e-16,95;UBERON:0000924,2.91e-16,95;UBERON:0006601,2.91e-16,95;UBERON:0010371,6.63e-15,73;UBERON:0002619,1.19e-13,17;UBERON:0002038,6.18e-11,3;UBERON:0009663,6.18e-11,3;UBERON:0009661,6.18e-11,3;UBERON:0000125,6.18e-11,3;UBERON:0002308,6.18e-11,3;UBERON:0000956,9.27e-11,21;UBERON:0001869,9.27e-11,21;UBERON:0000203,9.27e-11,21;UBERON:0002420,7.29e-10,8;UBERON:0007245,7.29e-10,8;UBERON:0010009,7.29e-10,8;UBERON:0010011,7.29e-10,8;UBERON:0000454,7.29e-10,8;UBERON:0002950,2.70e-08,4;UBERON:0001891,2.70e-08,4;UBERON:0009616,2.70e-08,4;UBERON:0010286,2.70e-08,4;UBERON:0000025,5.35e-08,114;UBERON:0004111,3.41e-07,122;UBERON:0002369,6.68e-07,7;UBERON:0006858,6.68e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0.191690942036473,0,0,3.83062014255563,4.76180253094355,0,0.457438218012048,1.04182674111352,3.07101298901519,3.93933827022176,5.19514042441154,1.47314292736834,1.13897344639282,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,3.56261133755579,0.173485326766136,0,0.691846491768175,1.05505848386836,1.05829836422134,1.0053327306374,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.449371918214468,1.37250180845588,0.125654352112864,0.173824320192276,0,0,0.648965052271031,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.05490517932983,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,1.18586333383957,2.24924921495265,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,5.10659408630682,0.720244376125241,0.129358683782755,0.857348140126369,0.709360934569094,1.60531935841864,2.30368628842969,1.8267896946876,0,0,0,0,0,0,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,0.920650473014354,4.58316410751517,1.3748254587495,1.37016503954128,1.5107877947794,1.35004500046361,2.2516060161211,3.17199686288943,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr1:79432827..79432840,- | |||
}} |
Revision as of 21:01, 13 September 2013
Short description: | p@chr1:79432827..79432840, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:79432827..79432840, - |
Coexpression cluster: | MCL_coexpression_mm9:608 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 6.18e-11 | 3 |
CNS neuron (sensu Vertebrata) | 8.25e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.25e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.