FFCP PHASE1:Mm9::chr8:89996704..89996721,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100040294|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=0bp_to_ENSMUST00000123808,ENSMUST00000146810,NR_033430,uc009mqs.1_5end|description=CAGE_peak_1_at_Gm2694_5end|id=chr8:89996704..89996721,+|ontology_enrichment_celltype=CL:0000117!4.45e-11!23;CL:0000337!4.45e-11!23;CL:0000540!2.14e-07!33;CL:0000047!2.14e-07!33;CL:0000031!2.14e-07!33;CL:0000404!2.14e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-14,23;CL:0000337,1.13e-14,23;CL:0000540,1.04e-09,33;CL:0000047,1.04e-09,33;CL:0000031,1.04e-09,33;CL:0000404,1.04e-09,33;CL:0000221,1.74e-07,44;CL:0000133,1.74e-07,44;CL:0000393,2.36e-07,39;CL:0000211,2.36e-07,39;CL:0002319,6.50e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.65e-14!71;UBERON:0003075!3.65e-14!71;UBERON:0007284!3.65e-14!71;UBERON:0001017!3.26e-13!73;UBERON:0005743!3.26e-13!73;UBERON:0000033!9.78e-13!63;UBERON:0001049!1.09e-12!52;UBERON:0005068!1.09e-12!52;UBERON:0006241!1.09e-12!52;UBERON:0007135!1.09e-12!52;UBERON:0000073!1.18e-12!75;UBERON:0001016!1.18e-12!75;UBERON:0004121!3.47e-12!102;UBERON:0000924!3.47e-12!102;UBERON:0006601!3.47e-12!102;UBERON:0000955!3.00e-10!50;UBERON:0006238!3.00e-10!50;UBERON:0003056!5.20e-10!49;UBERON:0002616!9.16e-10!49;UBERON:0003080!1.21e-07!40;UBERON:0002780!1.38e-07!39;UBERON:0001890!1.38e-07!39;UBERON:0006240!1.38e-07!39;UBERON:0001894!2.77e-07!10;UBERON:0006222!2.77e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.43e-14,73;UBERON:0001016,2.12e-13,75;UBERON:0000073,2.84e-13,54;UBERON:0002346,5.91e-13,64;UBERON:0003075,5.91e-13,64;UBERON:0007284,5.91e-13,64;UBERON:0001049,7.39e-13,52;UBERON:0005068,7.39e-13,52;UBERON:0006241,7.39e-13,52;UBERON:0007135,7.39e-13,52;UBERON:0004121,1.46e-12,95;UBERON:0000924,1.46e-12,95;UBERON:0006601,1.46e-12,95;UBERON:0010371,5.48e-12,73;UBERON:0001894,4.81e-11,10;UBERON:0006222,4.81e-11,10;UBERON:0003076,7.66e-10,12;UBERON:0003057,7.66e-10,12;UBERON:0000007,9.44e-10,8;UBERON:0003296,9.44e-10,8;UBERON:0010133,9.44e-10,8;UBERON:0000473,4.00e-09,14;UBERON:0000955,6.90e-09,47;UBERON:0006238,6.90e-09,47;UBERON:0003135,2.60e-08,15;UBERON:0002616,2.96e-08,46;UBERON:0002240,4.78e-08,6;UBERON:0005174,4.78e-08,6;UBERON:0001137,4.78e-08,6;UBERON:0010314,4.96e-08,92;UBERON:0000991,9.50e-08,18;UBERON:0005564,9.50e-08,18;UBERON:0003101,1.32e-07,16;UBERON:0000079,1.32e-07,16;UBERON:0003056,2.47e-07,49;UBERON:0001948,3.06e-07,5;UBERON:0002315,3.06e-07,5;UBERON:0002420,4.67e-07,8;UBERON:0007245,4.67e-07,8;UBERON:0010009,4.67e-07,8;UBERON:0010011,4.67e-07,8;UBERON:0000454,4.67e-07,8;UBERON:0004176,5.51e-07,17;UBERON:0009196,5.51e-07,17;UBERON:0009117,5.51e-07,17|phase1_expression=4.16387002472464,0.348975407639361,0.909998478779072,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0.137114433605739,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,19.0177473208022,13.7537654610729,13.9442908771359,0,0,0,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.405017814995072,0,10.5690864229407,10.1599528837742,1.71487118900936,1.15014565221884,0.919218786610021,0,6.2566795661742,3.22573719838111,15.1669230889723,14.4550476891807,13.022834263919,14.2383329490704,1.68828783009504,2.29197371665215,9.42811473515737,12.5287079103211,16.0303523409758,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0.259786004602869,0,2.53518155598025,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0,0.753613202763113,1.41106448562846,0.502666365318702,0,0,0,0.161766849947409,0,0,0,57.0922554172517,83.778682725382,0,0,0,0,0.299581278809645,0.457500602818626,1.13088916901578,0.173824320192276,0.255715457330331,2.0778804455956,1.29793010454206,0.101839363850316,0,0,1.26265113531884,0.390361328888111,0.229902104433473,0.540186389416048,0.60281927134286,1.02054748726992,1.5373646434182,3.46696380870997,1.03481348295606,1.29340795759705,0,0,0.219195732427575,0,0,0,2.9855140022774,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0.116765342367169,0,0,0.243206428637567,0.438599962275997,0.219550115291051,0.536825675041487,0.630869845692382,0.205809224758569,0,0,0.853153002140936,0,0.38660238396628,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.189709611372772,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.05046120976805,2.69586879162067,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,3.21321316421807,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,5.44703369206061,10.8036656418786,8.02023839453078,5.14408884075822,17.7340233642274,10.8804978737263,9.05019613311665,1.522324745573,0.23467170806371,0.42366414172764,0,0,0.161464426695906,0,0,0,0,2.41052892613663,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0,1.69107881605257,11.6622905914303,9.26567546559747,9.91701060554643,11.2369046425626,19.4299544314395,25.8185925020659,7.68205870579306,1.46803082195995,2.89900944991207,2.01621004380506,0,1.21635129174099,0.205421914329655,0,0,0,0,0,0,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0,0.665957860122194,0.538283139656854,0.671538465456314,0,0,0.183151624267265,2.14368379079066,0,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0,0,0.51776031175182,3.42498247027783,3.59122386060928,3.24393850932855,0.972426868273176,1.04806581313991,0.735374033800057,0.888986911206461,0.412070114477788,1.92551525755089,1.01078884705519,0.760437899670719,1.13175804831646,2.06011316433741,1.02440243847791,2.01024141344646,0.476293691283074,1.50649623728312,0.77163688185482,1.23625770240992,1.32479028120958,1.37147700954166,1.4198064492747,0.953744759789284,0.436039249896986,0.658765662907314,1.4384483341585,0.548783918618318,2.36762740294059,2.03706170768793,0.561142271657738,1.66089025373844,0.788035859004508,0.818462086339379,1.39443157067369,0.578719832943424,1.49886346762768,1.40358965067245,1.07435527024149,0.382576664137687,0,0.463735671240843|short_description=p1@Gm2694}} | ||
|EntrezGene=100040294 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000123808,ENSMUST00000146810,NR_033430,uc009mqs.1_5end | |||
|description=CAGE_peak_1_at_Gm2694_5end | |||
|id=chr8:89996704..89996721,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.45e-11!23;CL:0000337!4.45e-11!23;CL:0000540!2.14e-07!33;CL:0000047!2.14e-07!33;CL:0000031!2.14e-07!33;CL:0000404!2.14e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-14,23;CL:0000337,1.13e-14,23;CL:0000540,1.04e-09,33;CL:0000047,1.04e-09,33;CL:0000031,1.04e-09,33;CL:0000404,1.04e-09,33;CL:0000221,1.74e-07,44;CL:0000133,1.74e-07,44;CL:0000393,2.36e-07,39;CL:0000211,2.36e-07,39;CL:0002319,6.50e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.65e-14!71;UBERON:0003075!3.65e-14!71;UBERON:0007284!3.65e-14!71;UBERON:0001017!3.26e-13!73;UBERON:0005743!3.26e-13!73;UBERON:0000033!9.78e-13!63;UBERON:0001049!1.09e-12!52;UBERON:0005068!1.09e-12!52;UBERON:0006241!1.09e-12!52;UBERON:0007135!1.09e-12!52;UBERON:0000073!1.18e-12!75;UBERON:0001016!1.18e-12!75;UBERON:0004121!3.47e-12!102;UBERON:0000924!3.47e-12!102;UBERON:0006601!3.47e-12!102;UBERON:0000955!3.00e-10!50;UBERON:0006238!3.00e-10!50;UBERON:0003056!5.20e-10!49;UBERON:0002616!9.16e-10!49;UBERON:0003080!1.21e-07!40;UBERON:0002780!1.38e-07!39;UBERON:0001890!1.38e-07!39;UBERON:0006240!1.38e-07!39;UBERON:0001894!2.77e-07!10;UBERON:0006222!2.77e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.43e-14,73;UBERON:0001016,2.12e-13,75;UBERON:0000073,2.84e-13,54;UBERON:0002346,5.91e-13,64;UBERON:0003075,5.91e-13,64;UBERON:0007284,5.91e-13,64;UBERON:0001049,7.39e-13,52;UBERON:0005068,7.39e-13,52;UBERON:0006241,7.39e-13,52;UBERON:0007135,7.39e-13,52;UBERON:0004121,1.46e-12,95;UBERON:0000924,1.46e-12,95;UBERON:0006601,1.46e-12,95;UBERON:0010371,5.48e-12,73;UBERON:0001894,4.81e-11,10;UBERON:0006222,4.81e-11,10;UBERON:0003076,7.66e-10,12;UBERON:0003057,7.66e-10,12;UBERON:0000007,9.44e-10,8;UBERON:0003296,9.44e-10,8;UBERON:0010133,9.44e-10,8;UBERON:0000473,4.00e-09,14;UBERON:0000955,6.90e-09,47;UBERON:0006238,6.90e-09,47;UBERON:0003135,2.60e-08,15;UBERON:0002616,2.96e-08,46;UBERON:0002240,4.78e-08,6;UBERON:0005174,4.78e-08,6;UBERON:0001137,4.78e-08,6;UBERON:0010314,4.96e-08,92;UBERON:0000991,9.50e-08,18;UBERON:0005564,9.50e-08,18;UBERON:0003101,1.32e-07,16;UBERON:0000079,1.32e-07,16;UBERON:0003056,2.47e-07,49;UBERON:0001948,3.06e-07,5;UBERON:0002315,3.06e-07,5;UBERON:0002420,4.67e-07,8;UBERON:0007245,4.67e-07,8;UBERON:0010009,4.67e-07,8;UBERON:0010011,4.67e-07,8;UBERON:0000454,4.67e-07,8;UBERON:0004176,5.51e-07,17;UBERON:0009196,5.51e-07,17;UBERON:0009117,5.51e-07,17 | |||
|phase1_expression=4.16387002472464,0.348975407639361,0.909998478779072,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0.137114433605739,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,19.0177473208022,13.7537654610729,13.9442908771359,0,0,0,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.405017814995072,0,10.5690864229407,10.1599528837742,1.71487118900936,1.15014565221884,0.919218786610021,0,6.2566795661742,3.22573719838111,15.1669230889723,14.4550476891807,13.022834263919,14.2383329490704,1.68828783009504,2.29197371665215,9.42811473515737,12.5287079103211,16.0303523409758,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0.259786004602869,0,2.53518155598025,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0,0.753613202763113,1.41106448562846,0.502666365318702,0,0,0,0.161766849947409,0,0,0,57.0922554172517,83.778682725382,0,0,0,0,0.299581278809645,0.457500602818626,1.13088916901578,0.173824320192276,0.255715457330331,2.0778804455956,1.29793010454206,0.101839363850316,0,0,1.26265113531884,0.390361328888111,0.229902104433473,0.540186389416048,0.60281927134286,1.02054748726992,1.5373646434182,3.46696380870997,1.03481348295606,1.29340795759705,0,0,0.219195732427575,0,0,0,2.9855140022774,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0.116765342367169,0,0,0.243206428637567,0.438599962275997,0.219550115291051,0.536825675041487,0.630869845692382,0.205809224758569,0,0,0.853153002140936,0,0.38660238396628,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.189709611372772,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.05046120976805,2.69586879162067,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,3.21321316421807,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,5.44703369206061,10.8036656418786,8.02023839453078,5.14408884075822,17.7340233642274,10.8804978737263,9.05019613311665,1.522324745573,0.23467170806371,0.42366414172764,0,0,0.161464426695906,0,0,0,0,2.41052892613663,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0,1.69107881605257,11.6622905914303,9.26567546559747,9.91701060554643,11.2369046425626,19.4299544314395,25.8185925020659,7.68205870579306,1.46803082195995,2.89900944991207,2.01621004380506,0,1.21635129174099,0.205421914329655,0,0,0,0,0,0,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0,0.665957860122194,0.538283139656854,0.671538465456314,0,0,0.183151624267265,2.14368379079066,0,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0,0,0.51776031175182,3.42498247027783,3.59122386060928,3.24393850932855,0.972426868273176,1.04806581313991,0.735374033800057,0.888986911206461,0.412070114477788,1.92551525755089,1.01078884705519,0.760437899670719,1.13175804831646,2.06011316433741,1.02440243847791,2.01024141344646,0.476293691283074,1.50649623728312,0.77163688185482,1.23625770240992,1.32479028120958,1.37147700954166,1.4198064492747,0.953744759789284,0.436039249896986,0.658765662907314,1.4384483341585,0.548783918618318,2.36762740294059,2.03706170768793,0.561142271657738,1.66089025373844,0.788035859004508,0.818462086339379,1.39443157067369,0.578719832943424,1.49886346762768,1.40358965067245,1.07435527024149,0.382576664137687,0,0.463735671240843 | |||
|short_description=p1@Gm2694 | |||
}} |
Revision as of 16:23, 14 September 2013
Short description: | p1@Gm2694 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm2694_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000123808, ENSMUST00000146810, NR_033430, uc009mqs.1_5end |
EntrezGene: | Gm2694 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.13e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-14 | 23 |
neuron | 1.04e-09 | 33 |
neuronal stem cell | 1.04e-09 | 33 |
neuroblast | 1.04e-09 | 33 |
electrically signaling cell | 1.04e-09 | 33 |
ectodermal cell | 1.74e-07 | 44 |
neurectodermal cell | 1.74e-07 | 44 |
electrically responsive cell | 2.36e-07 | 39 |
electrically active cell | 2.36e-07 | 39 |
neural cell | 6.50e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.