FFCP PHASE1:Mm9::chr9:41387595..41387606,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=100|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:41387595..41387606,-|id=chr9:41387595..41387606,-|ontology_enrichment_celltype=CL:0000117!2.28e-20!23;CL:0000337!2.28e-20!23;CL:0000055!1.17e-16!50;CL:0002319!6.46e-16!43;CL:0000221!2.14e-15!44;CL:0000133!2.14e-15!44;CL:0000393!2.97e-15!39;CL:0000211!2.97e-15!39;CL:0000540!3.75e-14!33;CL:0000047!3.75e-14!33;CL:0000031!3.75e-14!33;CL:0000404!3.75e-14!33;CL:0002609!2.57e-11!6;CL:0002321!9.57e-10!70;CL:0000220!9.57e-10!70|ontology_enrichment_celltype_v019_2=CL:0002609,1.20e-44,6;CL:0000117,7.49e-38,23;CL:0000337,7.49e-38,23;CL:0000540,3.61e-26,33;CL:0000047,3.61e-26,33;CL:0000031,3.61e-26,33;CL:0000404,3.61e-26,33;CL:0002608,1.31e-22,3;CL:0000393,5.03e-22,39;CL:0000211,5.03e-22,39;CL:0002613,6.97e-22,3;CL:0002319,6.69e-20,43;CL:0000221,1.98e-19,44;CL:0000133,1.98e-19,44;CL:0002321,6.98e-12,70;CL:0000120,6.48e-11,3;CL:0000723,6.56e-09,91;CL:0000048,6.56e-09,91;CL:0000034,2.71e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.13e-12!34;UBERON:0000073!8.54e-09!75;UBERON:0001016!8.54e-09!75;UBERON:0002791!1.27e-08!29;UBERON:0003528!1.27e-08!29;UBERON:0001893!1.27e-08!29;UBERON:0001017!1.78e-08!73;UBERON:0005743!1.78e-08!73;UBERON:0001954!2.25e-08!7;UBERON:0003022!2.25e-08!7;UBERON:0002421!2.25e-08!7;UBERON:0000349!2.25e-08!7;UBERON:0002600!2.25e-08!7;UBERON:0001049!9.13e-07!52;UBERON:0005068!9.13e-07!52;UBERON:0006241!9.13e-07!52;UBERON:0007135!9.13e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.03e-24,29;UBERON:0002791,2.03e-24,29;UBERON:0001893,2.03e-24,29;UBERON:0002020,1.01e-20,34;UBERON:0002780,5.71e-18,39;UBERON:0001890,5.71e-18,39;UBERON:0006240,5.71e-18,39;UBERON:0003080,1.68e-17,40;UBERON:0000956,6.31e-17,21;UBERON:0001869,6.31e-17,21;UBERON:0000203,6.31e-17,21;UBERON:0001954,7.19e-17,7;UBERON:0003022,7.19e-17,7;UBERON:0002421,7.19e-17,7;UBERON:0000349,7.19e-17,7;UBERON:0002600,7.19e-17,7;UBERON:0002616,4.09e-15,46;UBERON:0000955,8.92e-15,47;UBERON:0006238,8.92e-15,47;UBERON:0003056,3.86e-14,49;UBERON:0001017,1.35e-13,73;UBERON:0000369,2.08e-13,5;UBERON:0002435,2.08e-13,5;UBERON:0000204,2.08e-13,5;UBERON:0010082,2.08e-13,5;UBERON:0001049,2.83e-13,52;UBERON:0005068,2.83e-13,52;UBERON:0006241,2.83e-13,52;UBERON:0007135,2.83e-13,52;UBERON:0001016,3.30e-13,75;UBERON:0000073,9.43e-13,54;UBERON:0002346,1.27e-10,64;UBERON:0003075,1.27e-10,64;UBERON:0007284,1.27e-10,64;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0010371,3.37e-09,73;UBERON:0002420,1.32e-08,8;UBERON:0007245,1.32e-08,8;UBERON:0010009,1.32e-08,8;UBERON:0010011,1.32e-08,8;UBERON:0000454,1.32e-08,8;UBERON:0002619,4.11e-07,17;UBERON:0010314,4.27e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,0,3.94020526772215,4.86021377994086,3.99617426567626,0.285650984403804,0.220868540951614,2.20483438586917,2.39613677545591,2.75765635983006,0,0,0.153606533256243,1.45074916503213,2.10421580285542,2.08365348222704,0.279182999001381,0,0,0,0.142371680799103,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0,0,0,0,0|short_description=p@chr9:41387595..41387606,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=100 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:41387595..41387606,- | |||
|id=chr9:41387595..41387606,- | |||
|ontology_enrichment_celltype=CL:0000117!2.28e-20!23;CL:0000337!2.28e-20!23;CL:0000055!1.17e-16!50;CL:0002319!6.46e-16!43;CL:0000221!2.14e-15!44;CL:0000133!2.14e-15!44;CL:0000393!2.97e-15!39;CL:0000211!2.97e-15!39;CL:0000540!3.75e-14!33;CL:0000047!3.75e-14!33;CL:0000031!3.75e-14!33;CL:0000404!3.75e-14!33;CL:0002609!2.57e-11!6;CL:0002321!9.57e-10!70;CL:0000220!9.57e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.20e-44,6;CL:0000117,7.49e-38,23;CL:0000337,7.49e-38,23;CL:0000540,3.61e-26,33;CL:0000047,3.61e-26,33;CL:0000031,3.61e-26,33;CL:0000404,3.61e-26,33;CL:0002608,1.31e-22,3;CL:0000393,5.03e-22,39;CL:0000211,5.03e-22,39;CL:0002613,6.97e-22,3;CL:0002319,6.69e-20,43;CL:0000221,1.98e-19,44;CL:0000133,1.98e-19,44;CL:0002321,6.98e-12,70;CL:0000120,6.48e-11,3;CL:0000723,6.56e-09,91;CL:0000048,6.56e-09,91;CL:0000034,2.71e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.13e-12!34;UBERON:0000073!8.54e-09!75;UBERON:0001016!8.54e-09!75;UBERON:0002791!1.27e-08!29;UBERON:0003528!1.27e-08!29;UBERON:0001893!1.27e-08!29;UBERON:0001017!1.78e-08!73;UBERON:0005743!1.78e-08!73;UBERON:0001954!2.25e-08!7;UBERON:0003022!2.25e-08!7;UBERON:0002421!2.25e-08!7;UBERON:0000349!2.25e-08!7;UBERON:0002600!2.25e-08!7;UBERON:0001049!9.13e-07!52;UBERON:0005068!9.13e-07!52;UBERON:0006241!9.13e-07!52;UBERON:0007135!9.13e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.03e-24,29;UBERON:0002791,2.03e-24,29;UBERON:0001893,2.03e-24,29;UBERON:0002020,1.01e-20,34;UBERON:0002780,5.71e-18,39;UBERON:0001890,5.71e-18,39;UBERON:0006240,5.71e-18,39;UBERON:0003080,1.68e-17,40;UBERON:0000956,6.31e-17,21;UBERON:0001869,6.31e-17,21;UBERON:0000203,6.31e-17,21;UBERON:0001954,7.19e-17,7;UBERON:0003022,7.19e-17,7;UBERON:0002421,7.19e-17,7;UBERON:0000349,7.19e-17,7;UBERON:0002600,7.19e-17,7;UBERON:0002616,4.09e-15,46;UBERON:0000955,8.92e-15,47;UBERON:0006238,8.92e-15,47;UBERON:0003056,3.86e-14,49;UBERON:0001017,1.35e-13,73;UBERON:0000369,2.08e-13,5;UBERON:0002435,2.08e-13,5;UBERON:0000204,2.08e-13,5;UBERON:0010082,2.08e-13,5;UBERON:0001049,2.83e-13,52;UBERON:0005068,2.83e-13,52;UBERON:0006241,2.83e-13,52;UBERON:0007135,2.83e-13,52;UBERON:0001016,3.30e-13,75;UBERON:0000073,9.43e-13,54;UBERON:0002346,1.27e-10,64;UBERON:0003075,1.27e-10,64;UBERON:0007284,1.27e-10,64;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0010371,3.37e-09,73;UBERON:0002420,1.32e-08,8;UBERON:0007245,1.32e-08,8;UBERON:0010009,1.32e-08,8;UBERON:0010011,1.32e-08,8;UBERON:0000454,1.32e-08,8;UBERON:0002619,4.11e-07,17;UBERON:0010314,4.27e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,0,3.94020526772215,4.86021377994086,3.99617426567626,0.285650984403804,0.220868540951614,2.20483438586917,2.39613677545591,2.75765635983006,0,0,0.153606533256243,1.45074916503213,2.10421580285542,2.08365348222704,0.279182999001381,0,0,0,0.142371680799103,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr9:41387595..41387606,- | |||
}} |
Revision as of 17:49, 14 September 2013
Short description: | p@chr9:41387595..41387606, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:41387595..41387606, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.20e-44 | 6 |
CNS neuron (sensu Vertebrata) | 7.49e-38 | 23 |
neuroblast (sensu Vertebrata) | 7.49e-38 | 23 |
neuron | 3.61e-26 | 33 |
neuronal stem cell | 3.61e-26 | 33 |
neuroblast | 3.61e-26 | 33 |
electrically signaling cell | 3.61e-26 | 33 |
hippocampal neuron | 1.31e-22 | 3 |
electrically responsive cell | 5.03e-22 | 39 |
electrically active cell | 5.03e-22 | 39 |
striatum neuron | 6.97e-22 | 3 |
neural cell | 6.69e-20 | 43 |
ectodermal cell | 1.98e-19 | 44 |
neurectodermal cell | 1.98e-19 | 44 |
embryonic cell | 6.98e-12 | 70 |
granule cell | 6.48e-11 | 3 |
somatic stem cell | 6.56e-09 | 91 |
multi fate stem cell | 6.56e-09 | 91 |
stem cell | 2.71e-08 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.