FFCP PHASE1:Mm9::chr15:76352832..76352900,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=170729|HGNC=|MCL_coexpression_id=100|UniProt=Q99M85|association_with_transcript=-273bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end|description=CAGE_peak_1_at_Scrt1_5end|id=chr15:76352832..76352900,-|ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!4.62e-16!23;CL:0000337!4.62e-16!23;CL:0000221!5.97e-13!44;CL:0000133!5.97e-13!44;CL:0002319!1.12e-12!43;CL:0000393!4.76e-12!39;CL:0000211!4.76e-12!39;CL:0000055!3.64e-09!50;CL:0002609!6.74e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,3.68e-20,23;CL:0000337,3.68e-20,23;CL:0000540,1.29e-14,33;CL:0000047,1.29e-14,33;CL:0000031,1.29e-14,33;CL:0000404,1.29e-14,33;CL:0000393,4.67e-11,39;CL:0000211,4.67e-11,39;CL:0000221,1.37e-09,44;CL:0000133,1.37e-09,44;CL:0002319,2.82e-09,43;CL:0002609,2.49e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.22e-34!71;UBERON:0003075!9.22e-34!71;UBERON:0007284!9.22e-34!71;UBERON:0001017!5.54e-31!73;UBERON:0005743!5.54e-31!73;UBERON:0004121!8.11e-31!102;UBERON:0000924!8.11e-31!102;UBERON:0006601!8.11e-31!102;UBERON:0000073!3.12e-30!75;UBERON:0001016!3.12e-30!75;UBERON:0000033!2.67e-27!63;UBERON:0001049!7.88e-27!52;UBERON:0005068!7.88e-27!52;UBERON:0006241!7.88e-27!52;UBERON:0007135!7.88e-27!52;UBERON:0003056!1.82e-25!49;UBERON:0000955!3.38e-23!50;UBERON:0006238!3.38e-23!50;UBERON:0002616!1.91e-22!49;UBERON:0002020!1.16e-21!34;UBERON:0003080!1.61e-20!40;UBERON:0002780!3.46e-20!39;UBERON:0001890!3.46e-20!39;UBERON:0006240!3.46e-20!39;UBERON:0002791!1.19e-17!29;UBERON:0003528!1.19e-17!29;UBERON:0001893!1.19e-17!29;UBERON:0007811!2.69e-15!86;UBERON:0000956!7.71e-13!21;UBERON:0001869!7.71e-13!21;UBERON:0000203!7.71e-13!21;UBERON:0000153!3.18e-12!94;UBERON:0002619!1.21e-09!17;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003076!8.06e-07!12;UBERON:0003057!8.06e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.43e-31,64;UBERON:0003075,1.43e-31,64;UBERON:0007284,1.43e-31,64;UBERON:0001049,1.56e-28,52;UBERON:0005068,1.56e-28,52;UBERON:0006241,1.56e-28,52;UBERON:0007135,1.56e-28,52;UBERON:0000073,1.82e-28,54;UBERON:0010371,1.57e-27,73;UBERON:0002020,1.75e-27,34;UBERON:0001017,8.00e-27,73;UBERON:0001016,1.26e-25,75;UBERON:0003056,1.30e-25,49;UBERON:0004121,3.14e-25,95;UBERON:0000924,3.14e-25,95;UBERON:0006601,3.14e-25,95;UBERON:0000955,9.63e-24,47;UBERON:0006238,9.63e-24,47;UBERON:0002616,7.77e-23,46;UBERON:0003528,2.22e-22,29;UBERON:0002791,2.22e-22,29;UBERON:0001893,2.22e-22,29;UBERON:0003080,1.15e-21,40;UBERON:0002780,3.08e-21,39;UBERON:0001890,3.08e-21,39;UBERON:0006240,3.08e-21,39;UBERON:0010314,6.07e-19,92;UBERON:0000956,2.91e-16,21;UBERON:0001869,2.91e-16,21;UBERON:0000203,2.91e-16,21;UBERON:0002619,3.43e-12,17;UBERON:0002021,2.31e-09,10;UBERON:0000411,2.31e-09,10;UBERON:0001950,2.31e-09,10;UBERON:0003076,2.69e-07,12;UBERON:0003057,2.69e-07,12;UBERON:0002420,3.03e-07,8;UBERON:0007245,3.03e-07,8;UBERON:0010009,3.03e-07,8;UBERON:0010011,3.03e-07,8;UBERON:0000454,3.03e-07,8;UBERON:0002240,6.82e-07,6;UBERON:0005174,6.82e-07,6;UBERON:0001137,6.82e-07,6|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,29.1335703637821,25.9205579843296,22.8179305262225,0,0,0,0,0,0.299600110518405,0.768436610643109,48.630428172676,55.2174287776615,51.1089656083858,12.5686433137674,10.6016899656774,48.9963196859816,48.7853447482823,35.8495326777908,0,4.72443150915195,3.5329502648936,30.7295050411352,23.9697626238313,21.3574481928272,1.3959149950069,1.68828783009504,1.68078072554491,12.6690291753677,9.681274294339,22.3679334990361,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,1.21786191324856,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,4.68449275218475,6.70229461803056,0,0,0,0,2.09706895166752,5.03250663100489,30.4083532113132,4.69325664519146,6.64860189058859,2.49345653471472,5.353961681236,0,0,0,0.420883711772948,0.650602214813519,3.21862946206862,5.76198815377118,7.68594570962147,7.96027040070536,9.86475646193343,7.02762934197966,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,26.1377715443382,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.04750385139728,0,0,0.631016438832513,0.390438744296638,1.07711698866399,0,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,2.37172666767914,8.67567554338879,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,1.26042765821917,1.29358683782755,0.214337035031592,0.532020700926821,1.96205699362278,1.48094118541909,0.913394847343798,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0.288030006257865,0,0.810900861160657,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0720589637461,13.8097570952153,20.0513429703789,8.76451229952807,3.42541259885321,9.06472676867641,4.72515750162264,3.60256962579376,4.07828168085784,4.65984280576638,2.69847103718859,9.17757208822371,3.58540572083682,4.86213434136588,4.19226325255965,4.22840069435032,4.4449345560323,2.47242068686673,4.1719497246936,4.54854981174835,2.5347929989024,2.45214243801899,2.24739617927718,3.39333307745807,3.79074095107048,4.76293691283074,4.98302601562879,3.8581844092741,3.70877310722976,3.53277408322554,4.11443102862498,3.19456451086807,3.33810665926249,2.61623549938191,3.29382831453657,2.70766745253365,3.29270351170991,1.31534855718921,3.80251518768413,1.12228454331548,3.08451047122853,3.25064791839359,1.22769312950907,3.25367366490529,2.89359916471712,12.2407183189594,3.04111090979031,3.65280791882107,0.191288332068843,0.441182838239031,0|short_description=p1@Scrt1}} | ||
|EntrezGene=170729 | |||
|HGNC= | |||
|MCL_coexpression_id=100 | |||
|UniProt=Q99M85 | |||
|association_with_transcript=-273bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end | |||
|description=CAGE_peak_1_at_Scrt1_5end | |||
|id=chr15:76352832..76352900,- | |||
|ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!4.62e-16!23;CL:0000337!4.62e-16!23;CL:0000221!5.97e-13!44;CL:0000133!5.97e-13!44;CL:0002319!1.12e-12!43;CL:0000393!4.76e-12!39;CL:0000211!4.76e-12!39;CL:0000055!3.64e-09!50;CL:0002609!6.74e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.68e-20,23;CL:0000337,3.68e-20,23;CL:0000540,1.29e-14,33;CL:0000047,1.29e-14,33;CL:0000031,1.29e-14,33;CL:0000404,1.29e-14,33;CL:0000393,4.67e-11,39;CL:0000211,4.67e-11,39;CL:0000221,1.37e-09,44;CL:0000133,1.37e-09,44;CL:0002319,2.82e-09,43;CL:0002609,2.49e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.22e-34!71;UBERON:0003075!9.22e-34!71;UBERON:0007284!9.22e-34!71;UBERON:0001017!5.54e-31!73;UBERON:0005743!5.54e-31!73;UBERON:0004121!8.11e-31!102;UBERON:0000924!8.11e-31!102;UBERON:0006601!8.11e-31!102;UBERON:0000073!3.12e-30!75;UBERON:0001016!3.12e-30!75;UBERON:0000033!2.67e-27!63;UBERON:0001049!7.88e-27!52;UBERON:0005068!7.88e-27!52;UBERON:0006241!7.88e-27!52;UBERON:0007135!7.88e-27!52;UBERON:0003056!1.82e-25!49;UBERON:0000955!3.38e-23!50;UBERON:0006238!3.38e-23!50;UBERON:0002616!1.91e-22!49;UBERON:0002020!1.16e-21!34;UBERON:0003080!1.61e-20!40;UBERON:0002780!3.46e-20!39;UBERON:0001890!3.46e-20!39;UBERON:0006240!3.46e-20!39;UBERON:0002791!1.19e-17!29;UBERON:0003528!1.19e-17!29;UBERON:0001893!1.19e-17!29;UBERON:0007811!2.69e-15!86;UBERON:0000956!7.71e-13!21;UBERON:0001869!7.71e-13!21;UBERON:0000203!7.71e-13!21;UBERON:0000153!3.18e-12!94;UBERON:0002619!1.21e-09!17;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003076!8.06e-07!12;UBERON:0003057!8.06e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.43e-31,64;UBERON:0003075,1.43e-31,64;UBERON:0007284,1.43e-31,64;UBERON:0001049,1.56e-28,52;UBERON:0005068,1.56e-28,52;UBERON:0006241,1.56e-28,52;UBERON:0007135,1.56e-28,52;UBERON:0000073,1.82e-28,54;UBERON:0010371,1.57e-27,73;UBERON:0002020,1.75e-27,34;UBERON:0001017,8.00e-27,73;UBERON:0001016,1.26e-25,75;UBERON:0003056,1.30e-25,49;UBERON:0004121,3.14e-25,95;UBERON:0000924,3.14e-25,95;UBERON:0006601,3.14e-25,95;UBERON:0000955,9.63e-24,47;UBERON:0006238,9.63e-24,47;UBERON:0002616,7.77e-23,46;UBERON:0003528,2.22e-22,29;UBERON:0002791,2.22e-22,29;UBERON:0001893,2.22e-22,29;UBERON:0003080,1.15e-21,40;UBERON:0002780,3.08e-21,39;UBERON:0001890,3.08e-21,39;UBERON:0006240,3.08e-21,39;UBERON:0010314,6.07e-19,92;UBERON:0000956,2.91e-16,21;UBERON:0001869,2.91e-16,21;UBERON:0000203,2.91e-16,21;UBERON:0002619,3.43e-12,17;UBERON:0002021,2.31e-09,10;UBERON:0000411,2.31e-09,10;UBERON:0001950,2.31e-09,10;UBERON:0003076,2.69e-07,12;UBERON:0003057,2.69e-07,12;UBERON:0002420,3.03e-07,8;UBERON:0007245,3.03e-07,8;UBERON:0010009,3.03e-07,8;UBERON:0010011,3.03e-07,8;UBERON:0000454,3.03e-07,8;UBERON:0002240,6.82e-07,6;UBERON:0005174,6.82e-07,6;UBERON:0001137,6.82e-07,6 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,29.1335703637821,25.9205579843296,22.8179305262225,0,0,0,0,0,0.299600110518405,0.768436610643109,48.630428172676,55.2174287776615,51.1089656083858,12.5686433137674,10.6016899656774,48.9963196859816,48.7853447482823,35.8495326777908,0,4.72443150915195,3.5329502648936,30.7295050411352,23.9697626238313,21.3574481928272,1.3959149950069,1.68828783009504,1.68078072554491,12.6690291753677,9.681274294339,22.3679334990361,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,1.21786191324856,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,4.68449275218475,6.70229461803056,0,0,0,0,2.09706895166752,5.03250663100489,30.4083532113132,4.69325664519146,6.64860189058859,2.49345653471472,5.353961681236,0,0,0,0.420883711772948,0.650602214813519,3.21862946206862,5.76198815377118,7.68594570962147,7.96027040070536,9.86475646193343,7.02762934197966,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,26.1377715443382,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.04750385139728,0,0,0.631016438832513,0.390438744296638,1.07711698866399,0,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,2.37172666767914,8.67567554338879,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,1.26042765821917,1.29358683782755,0.214337035031592,0.532020700926821,1.96205699362278,1.48094118541909,0.913394847343798,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0.288030006257865,0,0.810900861160657,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0720589637461,13.8097570952153,20.0513429703789,8.76451229952807,3.42541259885321,9.06472676867641,4.72515750162264,3.60256962579376,4.07828168085784,4.65984280576638,2.69847103718859,9.17757208822371,3.58540572083682,4.86213434136588,4.19226325255965,4.22840069435032,4.4449345560323,2.47242068686673,4.1719497246936,4.54854981174835,2.5347929989024,2.45214243801899,2.24739617927718,3.39333307745807,3.79074095107048,4.76293691283074,4.98302601562879,3.8581844092741,3.70877310722976,3.53277408322554,4.11443102862498,3.19456451086807,3.33810665926249,2.61623549938191,3.29382831453657,2.70766745253365,3.29270351170991,1.31534855718921,3.80251518768413,1.12228454331548,3.08451047122853,3.25064791839359,1.22769312950907,3.25367366490529,2.89359916471712,12.2407183189594,3.04111090979031,3.65280791882107,0.191288332068843,0.441182838239031,0 | |||
|short_description=p1@Scrt1 | |||
}} |
Revision as of 10:59, 13 September 2013
Short description: | p1@Scrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | -273bp_to_ENSMUST00000096365, NM_130893, uc007wko.1_5end |
EntrezGene: | Scrt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.68e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.68e-20 | 23 |
neuron | 1.29e-14 | 33 |
neuronal stem cell | 1.29e-14 | 33 |
neuroblast | 1.29e-14 | 33 |
electrically signaling cell | 1.29e-14 | 33 |
electrically responsive cell | 4.67e-11 | 39 |
electrically active cell | 4.67e-11 | 39 |
ectodermal cell | 1.37e-09 | 44 |
neurectodermal cell | 1.37e-09 | 44 |
neural cell | 2.82e-09 | 43 |
neuron of cerebral cortex | 2.49e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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