FFCP PHASE1:Mm9::chr10:102830286..102830303,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=103098|HGNC=|MCL_coexpression_id=1|UniProt=Q8BG16|association_with_transcript=-138bp_to_NM_001252330,NM_175328_5end|description=CAGE_peak_4_at_Slc6a15_5end|id=chr10:102830286..102830303,+|ontology_enrichment_celltype=CL:0000540!3.30e-10!33;CL:0000047!3.30e-10!33;CL:0000031!3.30e-10!33;CL:0000404!3.30e-10!33;CL:0000117!4.10e-08!23;CL:0000337!4.10e-08!23;CL:0000221!6.29e-08!44;CL:0000133!6.29e-08!44;CL:0002319!9.35e-08!43;CL:0000393!2.78e-07!39;CL:0000211!2.78e-07!39|ontology_enrichment_celltype_v019_2=CL:0002610,2.47e-08,3;CL:0002614,5.74e-08,3;CL:0000540,6.30e-08,33;CL:0000047,6.30e-08,33;CL:0000031,6.30e-08,33;CL:0000404,6.30e-08,33;CL:0000117,5.17e-07,23;CL:0000337,5.17e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.17e-28!71;UBERON:0003075!2.17e-28!71;UBERON:0007284!2.17e-28!71;UBERON:0004121!3.38e-26!102;UBERON:0000924!3.38e-26!102;UBERON:0006601!3.38e-26!102;UBERON:0000073!1.45e-22!75;UBERON:0001016!1.45e-22!75;UBERON:0001017!1.01e-21!73;UBERON:0005743!1.01e-21!73;UBERON:0000033!7.03e-20!63;UBERON:0001049!2.53e-19!52;UBERON:0005068!2.53e-19!52;UBERON:0006241!2.53e-19!52;UBERON:0007135!2.53e-19!52;UBERON:0000955!1.36e-18!50;UBERON:0006238!1.36e-18!50;UBERON:0002616!6.87e-18!49;UBERON:0002020!3.73e-17!34;UBERON:0003056!1.14e-16!49;UBERON:0002791!3.04e-14!29;UBERON:0003528!3.04e-14!29;UBERON:0001893!3.04e-14!29;UBERON:0003080!8.48e-14!40;UBERON:0002780!5.34e-13!39;UBERON:0001890!5.34e-13!39;UBERON:0006240!5.34e-13!39;UBERON:0000956!1.39e-10!21;UBERON:0001869!1.39e-10!21;UBERON:0000203!1.39e-10!21;UBERON:0007811!2.15e-10!86;UBERON:0002619!1.79e-09!17;UBERON:0002021!2.80e-09!10;UBERON:0000411!2.80e-09!10;UBERON:0001950!2.80e-09!10;UBERON:0000153!1.18e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.36e-27,73;UBERON:0000073,1.18e-26,54;UBERON:0001016,2.68e-26,75;UBERON:0001049,2.39e-23,52;UBERON:0005068,2.39e-23,52;UBERON:0006241,2.39e-23,52;UBERON:0007135,2.39e-23,52;UBERON:0002346,2.87e-21,64;UBERON:0003075,2.87e-21,64;UBERON:0007284,2.87e-21,64;UBERON:0004121,8.18e-21,95;UBERON:0000924,8.18e-21,95;UBERON:0006601,8.18e-21,95;UBERON:0000955,1.14e-19,47;UBERON:0006238,1.14e-19,47;UBERON:0002616,2.99e-18,46;UBERON:0010371,6.54e-18,73;UBERON:0002020,1.20e-15,34;UBERON:0010314,3.21e-14,92;UBERON:0003080,3.49e-13,40;UBERON:0003528,1.66e-12,29;UBERON:0002791,1.66e-12,29;UBERON:0001893,1.66e-12,29;UBERON:0002021,1.94e-12,10;UBERON:0000411,1.94e-12,10;UBERON:0001950,1.94e-12,10;UBERON:0003076,3.88e-12,12;UBERON:0003057,3.88e-12,12;UBERON:0002780,1.02e-11,39;UBERON:0001890,1.02e-11,39;UBERON:0006240,1.02e-11,39;UBERON:0003056,2.07e-11,49;UBERON:0002950,1.96e-10,4;UBERON:0001891,1.96e-10,4;UBERON:0009616,1.96e-10,4;UBERON:0010286,1.96e-10,4;UBERON:0002619,5.88e-09,17;UBERON:0000956,7.97e-09,21;UBERON:0001869,7.97e-09,21;UBERON:0000203,7.97e-09,21;UBERON:0004684,2.47e-08,3;UBERON:0002275,2.47e-08,3;UBERON:0002038,5.74e-08,3;UBERON:0009663,5.74e-08,3;UBERON:0009661,5.74e-08,3;UBERON:0000125,5.74e-08,3;UBERON:0002308,5.74e-08,3;UBERON:0000025,1.24e-07,114;UBERON:0004733,4.31e-07,6;UBERON:0004732,4.31e-07,6;UBERON:0002028,4.31e-07,6;UBERON:0007277,4.31e-07,6;UBERON:0004111,8.83e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,1.99955689082663,1.54607978666129,0.244981598429908,0,0.919218786610021,3.30347642998166,2.93680877595932,2.61131106535614,0.263772575460388,0.548925861614458,0,2.79182999001381,1.12552522006336,3.97275444219706,1.17851434189467,0.569486723196412,0.186399445825301,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.173485326766136,0.913396434936424,1.38369298353635,0.301445281105245,0.470354828542819,0.251333182659351,0,0,0,0,0,0,1.86391761218122,2.04946557908083,2.09446706813455,0,0,0,0,5.09288173976397,2.28750301409313,0.879580464790051,2.9550134432687,2.30143911597297,3.32460871295296,2.27137768294861,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0,0.900310649026746,0.60281927134286,0.136072998302656,0.384341160854549,0.281105173679186,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.814605311381257,0,0,0.379419222745544,0.738050739898011,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.42202359951168,4.33683240391152,0,0,0.94652465824877,1.17131623288992,0.861693590931196,0,0,1.69845918473299,0.404810701674894,0.584511715822624,1.18586333383957,1.28528526568723,0.141940085208269,0,0,0,2.65490276679926,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.532020700926821,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,5.19190845629427,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,6.7770221114048,3.22227665555024,5.15605962095457,2.57779773515531,2.74033007908257,5.2877572817279,0.675022500231806,0.900642406448441,0.906284817968409,3.62432218226274,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0,0.256100609619477,0.0574354689556133,0.952587382566147,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0,0,0,0|short_description=p4@Slc6a15}} | ||
|EntrezGene=103098 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BG16 | |||
|association_with_transcript=-138bp_to_NM_001252330,NM_175328_5end | |||
|description=CAGE_peak_4_at_Slc6a15_5end | |||
|id=chr10:102830286..102830303,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.30e-10!33;CL:0000047!3.30e-10!33;CL:0000031!3.30e-10!33;CL:0000404!3.30e-10!33;CL:0000117!4.10e-08!23;CL:0000337!4.10e-08!23;CL:0000221!6.29e-08!44;CL:0000133!6.29e-08!44;CL:0002319!9.35e-08!43;CL:0000393!2.78e-07!39;CL:0000211!2.78e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.47e-08,3;CL:0002614,5.74e-08,3;CL:0000540,6.30e-08,33;CL:0000047,6.30e-08,33;CL:0000031,6.30e-08,33;CL:0000404,6.30e-08,33;CL:0000117,5.17e-07,23;CL:0000337,5.17e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.17e-28!71;UBERON:0003075!2.17e-28!71;UBERON:0007284!2.17e-28!71;UBERON:0004121!3.38e-26!102;UBERON:0000924!3.38e-26!102;UBERON:0006601!3.38e-26!102;UBERON:0000073!1.45e-22!75;UBERON:0001016!1.45e-22!75;UBERON:0001017!1.01e-21!73;UBERON:0005743!1.01e-21!73;UBERON:0000033!7.03e-20!63;UBERON:0001049!2.53e-19!52;UBERON:0005068!2.53e-19!52;UBERON:0006241!2.53e-19!52;UBERON:0007135!2.53e-19!52;UBERON:0000955!1.36e-18!50;UBERON:0006238!1.36e-18!50;UBERON:0002616!6.87e-18!49;UBERON:0002020!3.73e-17!34;UBERON:0003056!1.14e-16!49;UBERON:0002791!3.04e-14!29;UBERON:0003528!3.04e-14!29;UBERON:0001893!3.04e-14!29;UBERON:0003080!8.48e-14!40;UBERON:0002780!5.34e-13!39;UBERON:0001890!5.34e-13!39;UBERON:0006240!5.34e-13!39;UBERON:0000956!1.39e-10!21;UBERON:0001869!1.39e-10!21;UBERON:0000203!1.39e-10!21;UBERON:0007811!2.15e-10!86;UBERON:0002619!1.79e-09!17;UBERON:0002021!2.80e-09!10;UBERON:0000411!2.80e-09!10;UBERON:0001950!2.80e-09!10;UBERON:0000153!1.18e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.36e-27,73;UBERON:0000073,1.18e-26,54;UBERON:0001016,2.68e-26,75;UBERON:0001049,2.39e-23,52;UBERON:0005068,2.39e-23,52;UBERON:0006241,2.39e-23,52;UBERON:0007135,2.39e-23,52;UBERON:0002346,2.87e-21,64;UBERON:0003075,2.87e-21,64;UBERON:0007284,2.87e-21,64;UBERON:0004121,8.18e-21,95;UBERON:0000924,8.18e-21,95;UBERON:0006601,8.18e-21,95;UBERON:0000955,1.14e-19,47;UBERON:0006238,1.14e-19,47;UBERON:0002616,2.99e-18,46;UBERON:0010371,6.54e-18,73;UBERON:0002020,1.20e-15,34;UBERON:0010314,3.21e-14,92;UBERON:0003080,3.49e-13,40;UBERON:0003528,1.66e-12,29;UBERON:0002791,1.66e-12,29;UBERON:0001893,1.66e-12,29;UBERON:0002021,1.94e-12,10;UBERON:0000411,1.94e-12,10;UBERON:0001950,1.94e-12,10;UBERON:0003076,3.88e-12,12;UBERON:0003057,3.88e-12,12;UBERON:0002780,1.02e-11,39;UBERON:0001890,1.02e-11,39;UBERON:0006240,1.02e-11,39;UBERON:0003056,2.07e-11,49;UBERON:0002950,1.96e-10,4;UBERON:0001891,1.96e-10,4;UBERON:0009616,1.96e-10,4;UBERON:0010286,1.96e-10,4;UBERON:0002619,5.88e-09,17;UBERON:0000956,7.97e-09,21;UBERON:0001869,7.97e-09,21;UBERON:0000203,7.97e-09,21;UBERON:0004684,2.47e-08,3;UBERON:0002275,2.47e-08,3;UBERON:0002038,5.74e-08,3;UBERON:0009663,5.74e-08,3;UBERON:0009661,5.74e-08,3;UBERON:0000125,5.74e-08,3;UBERON:0002308,5.74e-08,3;UBERON:0000025,1.24e-07,114;UBERON:0004733,4.31e-07,6;UBERON:0004732,4.31e-07,6;UBERON:0002028,4.31e-07,6;UBERON:0007277,4.31e-07,6;UBERON:0004111,8.83e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,1.99955689082663,1.54607978666129,0.244981598429908,0,0.919218786610021,3.30347642998166,2.93680877595932,2.61131106535614,0.263772575460388,0.548925861614458,0,2.79182999001381,1.12552522006336,3.97275444219706,1.17851434189467,0.569486723196412,0.186399445825301,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.173485326766136,0.913396434936424,1.38369298353635,0.301445281105245,0.470354828542819,0.251333182659351,0,0,0,0,0,0,1.86391761218122,2.04946557908083,2.09446706813455,0,0,0,0,5.09288173976397,2.28750301409313,0.879580464790051,2.9550134432687,2.30143911597297,3.32460871295296,2.27137768294861,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0,0.900310649026746,0.60281927134286,0.136072998302656,0.384341160854549,0.281105173679186,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.814605311381257,0,0,0.379419222745544,0.738050739898011,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.42202359951168,4.33683240391152,0,0,0.94652465824877,1.17131623288992,0.861693590931196,0,0,1.69845918473299,0.404810701674894,0.584511715822624,1.18586333383957,1.28528526568723,0.141940085208269,0,0,0,2.65490276679926,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.532020700926821,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,5.19190845629427,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,6.7770221114048,3.22227665555024,5.15605962095457,2.57779773515531,2.74033007908257,5.2877572817279,0.675022500231806,0.900642406448441,0.906284817968409,3.62432218226274,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0,0.256100609619477,0.0574354689556133,0.952587382566147,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p4@Slc6a15 | |||
}} |
Revision as of 15:37, 12 September 2013
Short description: | p4@Slc6a15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc6a15_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -138bp_to_NM_001252330, NM_175328_5end |
EntrezGene: | Slc6a15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.47e-08 | 3 |
neuron of the substantia nigra | 5.74e-08 | 3 |
neuron | 6.30e-08 | 33 |
neuronal stem cell | 6.30e-08 | 33 |
neuroblast | 6.30e-08 | 33 |
electrically signaling cell | 6.30e-08 | 33 |
CNS neuron (sensu Vertebrata) | 5.17e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.17e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.