FFCP PHASE1:Mm9::chr13:51664806..51664836,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:51664806..51664836,-|id=chr13:51664806..51664836,-|ontology_enrichment_celltype=CL:0000221!3.49e-18!44;CL:0000133!3.49e-18!44;CL:0002319!1.14e-17!43;CL:0000540!5.69e-17!33;CL:0000047!5.69e-17!33;CL:0000031!5.69e-17!33;CL:0000404!5.69e-17!33;CL:0000055!1.79e-13!50;CL:0000393!5.41e-13!39;CL:0000211!5.41e-13!39;CL:0000117!4.69e-12!23;CL:0000337!4.69e-12!23|ontology_enrichment_celltype_v019_2=CL:0000221,2.71e-22,44;CL:0000133,2.71e-22,44;CL:0000540,3.87e-22,33;CL:0000047,3.87e-22,33;CL:0000031,3.87e-22,33;CL:0000404,3.87e-22,33;CL:0002319,1.38e-21,43;CL:0000393,7.31e-17,39;CL:0000211,7.31e-17,39;CL:0000117,2.43e-16,23;CL:0000337,2.43e-16,23;CL:0002321,4.53e-09,70;CL:0000107,6.40e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.67e-37!73;UBERON:0005743!1.67e-37!73;UBERON:0000073!4.18e-37!75;UBERON:0001016!4.18e-37!75;UBERON:0004121!8.30e-33!102;UBERON:0000924!8.30e-33!102;UBERON:0006601!8.30e-33!102;UBERON:0002346!1.04e-28!71;UBERON:0003075!1.04e-28!71;UBERON:0007284!1.04e-28!71;UBERON:0000033!1.11e-27!63;UBERON:0001049!1.33e-25!52;UBERON:0005068!1.33e-25!52;UBERON:0006241!1.33e-25!52;UBERON:0007135!1.33e-25!52;UBERON:0000955!1.01e-24!50;UBERON:0006238!1.01e-24!50;UBERON:0002616!4.22e-24!49;UBERON:0003056!7.62e-24!49;UBERON:0003080!2.32e-20!40;UBERON:0002780!8.95e-20!39;UBERON:0001890!8.95e-20!39;UBERON:0006240!8.95e-20!39;UBERON:0002020!2.40e-19!34;UBERON:0002791!2.99e-16!29;UBERON:0003528!2.99e-16!29;UBERON:0001893!2.99e-16!29;UBERON:0007811!3.04e-16!86;UBERON:0000153!2.79e-15!94;UBERON:0000956!2.91e-12!21;UBERON:0001869!2.91e-12!21;UBERON:0000203!2.91e-12!21;UBERON:0002619!7.89e-11!17;UBERON:0002021!1.93e-08!10;UBERON:0000411!1.93e-08!10;UBERON:0001950!1.93e-08!10;UBERON:0000468!8.49e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.09e-50,73;UBERON:0001016,7.53e-48,75;UBERON:0004121,3.81e-46,95;UBERON:0000924,3.81e-46,95;UBERON:0006601,3.81e-46,95;UBERON:0002346,4.82e-43,64;UBERON:0003075,4.82e-43,64;UBERON:0007284,4.82e-43,64;UBERON:0000073,6.61e-38,54;UBERON:0010371,1.75e-36,73;UBERON:0001049,2.67e-35,52;UBERON:0005068,2.67e-35,52;UBERON:0006241,2.67e-35,52;UBERON:0007135,2.67e-35,52;UBERON:0003056,2.53e-32,49;UBERON:0000955,1.21e-30,47;UBERON:0006238,1.21e-30,47;UBERON:0002616,8.63e-30,46;UBERON:0003080,2.12e-27,40;UBERON:0010314,6.07e-27,92;UBERON:0002020,1.24e-26,34;UBERON:0002780,1.42e-26,39;UBERON:0001890,1.42e-26,39;UBERON:0006240,1.42e-26,39;UBERON:0003528,2.94e-22,29;UBERON:0002791,2.94e-22,29;UBERON:0001893,2.94e-22,29;UBERON:0000956,1.24e-16,21;UBERON:0001869,1.24e-16,21;UBERON:0000203,1.24e-16,21;UBERON:0002619,1.30e-14,17;UBERON:0002021,2.97e-11,10;UBERON:0000411,2.97e-11,10;UBERON:0001950,2.97e-11,10;UBERON:0000025,3.69e-08,114;UBERON:0003076,4.34e-08,12;UBERON:0003057,4.34e-08,12;UBERON:0002410,6.40e-08,9;UBERON:0004111,3.37e-07,122;UBERON:0002420,9.11e-07,8;UBERON:0007245,9.11e-07,8;UBERON:0010009,9.11e-07,8;UBERON:0010011,9.11e-07,8;UBERON:0000454,9.11e-07,8|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.31811709640683,1.55543919259427,0.55994568650145,7.18762821824858,0,0,0,0.514518872071894,0,0.515672092277442,1.41621522601718,3.70293685490423,1.90149421051854,0,0,0,0,0,2.69640099466564,4.2264013585371,2.90330914463737,1.89008313664367,1.47227472945967,12.5686433137674,13.693849539,2.81728838194394,1.91690942036473,5.51531271966013,47.3498288297371,39.7107621444934,48.5396645089729,3.82470234417562,2.19570344645783,2.6045668527838,13.4007839520663,11.2552522006336,14.0574387954665,22.3917724959987,22.6370972470574,3.72798891650601,0.227178579999552,0.604572480854284,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,4.78867627240714,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0.304465478312141,0.230615497256059,1.05505848386836,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.647067399789637,0.441683036920787,0,0,2.92780797011547,2.09446706813455,0,0,0,0,10.1857634795279,9.60751265919116,5.02617408451458,20.8589184230732,20.4572365864264,15.9996794310861,24.4984307232314,0.407357455401265,0,0,1.05220927943237,1.95180664444056,1.83921683546778,1.98068342785884,2.56198190320716,4.35433594568498,7.30248205623644,11.3379086717272,1.55222022443409,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0.697601834251224,0.268273401399619,0,0.329119699826961,0.656669856316381,0.0810688095458557,1.31579988682799,1.53685080703735,0.671032093801859,11.565947171027,9.98174740079059,0,0.264450566663544,1.06644125267617,0.464473343720877,0.257734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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:51664806..51664836,- | |||
|id=chr13:51664806..51664836,- | |||
|ontology_enrichment_celltype=CL:0000221!3.49e-18!44;CL:0000133!3.49e-18!44;CL:0002319!1.14e-17!43;CL:0000540!5.69e-17!33;CL:0000047!5.69e-17!33;CL:0000031!5.69e-17!33;CL:0000404!5.69e-17!33;CL:0000055!1.79e-13!50;CL:0000393!5.41e-13!39;CL:0000211!5.41e-13!39;CL:0000117!4.69e-12!23;CL:0000337!4.69e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.71e-22,44;CL:0000133,2.71e-22,44;CL:0000540,3.87e-22,33;CL:0000047,3.87e-22,33;CL:0000031,3.87e-22,33;CL:0000404,3.87e-22,33;CL:0002319,1.38e-21,43;CL:0000393,7.31e-17,39;CL:0000211,7.31e-17,39;CL:0000117,2.43e-16,23;CL:0000337,2.43e-16,23;CL:0002321,4.53e-09,70;CL:0000107,6.40e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.67e-37!73;UBERON:0005743!1.67e-37!73;UBERON:0000073!4.18e-37!75;UBERON:0001016!4.18e-37!75;UBERON:0004121!8.30e-33!102;UBERON:0000924!8.30e-33!102;UBERON:0006601!8.30e-33!102;UBERON:0002346!1.04e-28!71;UBERON:0003075!1.04e-28!71;UBERON:0007284!1.04e-28!71;UBERON:0000033!1.11e-27!63;UBERON:0001049!1.33e-25!52;UBERON:0005068!1.33e-25!52;UBERON:0006241!1.33e-25!52;UBERON:0007135!1.33e-25!52;UBERON:0000955!1.01e-24!50;UBERON:0006238!1.01e-24!50;UBERON:0002616!4.22e-24!49;UBERON:0003056!7.62e-24!49;UBERON:0003080!2.32e-20!40;UBERON:0002780!8.95e-20!39;UBERON:0001890!8.95e-20!39;UBERON:0006240!8.95e-20!39;UBERON:0002020!2.40e-19!34;UBERON:0002791!2.99e-16!29;UBERON:0003528!2.99e-16!29;UBERON:0001893!2.99e-16!29;UBERON:0007811!3.04e-16!86;UBERON:0000153!2.79e-15!94;UBERON:0000956!2.91e-12!21;UBERON:0001869!2.91e-12!21;UBERON:0000203!2.91e-12!21;UBERON:0002619!7.89e-11!17;UBERON:0002021!1.93e-08!10;UBERON:0000411!1.93e-08!10;UBERON:0001950!1.93e-08!10;UBERON:0000468!8.49e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.09e-50,73;UBERON:0001016,7.53e-48,75;UBERON:0004121,3.81e-46,95;UBERON:0000924,3.81e-46,95;UBERON:0006601,3.81e-46,95;UBERON:0002346,4.82e-43,64;UBERON:0003075,4.82e-43,64;UBERON:0007284,4.82e-43,64;UBERON:0000073,6.61e-38,54;UBERON:0010371,1.75e-36,73;UBERON:0001049,2.67e-35,52;UBERON:0005068,2.67e-35,52;UBERON:0006241,2.67e-35,52;UBERON:0007135,2.67e-35,52;UBERON:0003056,2.53e-32,49;UBERON:0000955,1.21e-30,47;UBERON:0006238,1.21e-30,47;UBERON:0002616,8.63e-30,46;UBERON:0003080,2.12e-27,40;UBERON:0010314,6.07e-27,92;UBERON:0002020,1.24e-26,34;UBERON:0002780,1.42e-26,39;UBERON:0001890,1.42e-26,39;UBERON:0006240,1.42e-26,39;UBERON:0003528,2.94e-22,29;UBERON:0002791,2.94e-22,29;UBERON:0001893,2.94e-22,29;UBERON:0000956,1.24e-16,21;UBERON:0001869,1.24e-16,21;UBERON:0000203,1.24e-16,21;UBERON:0002619,1.30e-14,17;UBERON:0002021,2.97e-11,10;UBERON:0000411,2.97e-11,10;UBERON:0001950,2.97e-11,10;UBERON:0000025,3.69e-08,114;UBERON:0003076,4.34e-08,12;UBERON:0003057,4.34e-08,12;UBERON:0002410,6.40e-08,9;UBERON:0004111,3.37e-07,122;UBERON:0002420,9.11e-07,8;UBERON:0007245,9.11e-07,8;UBERON:0010009,9.11e-07,8;UBERON:0010011,9.11e-07,8;UBERON:0000454,9.11e-07,8 | |||
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|short_description=p@chr13:51664806..51664836,- | |||
}} |
Revision as of 00:43, 13 September 2013
Short description: | p@chr13:51664806..51664836, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:51664806..51664836, - |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.71e-22 | 44 |
neurectodermal cell | 2.71e-22 | 44 |
neuron | 3.87e-22 | 33 |
neuronal stem cell | 3.87e-22 | 33 |
neuroblast | 3.87e-22 | 33 |
electrically signaling cell | 3.87e-22 | 33 |
neural cell | 1.38e-21 | 43 |
electrically responsive cell | 7.31e-17 | 39 |
electrically active cell | 7.31e-17 | 39 |
CNS neuron (sensu Vertebrata) | 2.43e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-16 | 23 |
embryonic cell | 4.53e-09 | 70 |
autonomic neuron | 6.40e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.