FFCP PHASE1:Hg19::chr1:223900098..223900109,+: Difference between revisions
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{{FFCP | 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62041277132864,0,0.335566295393377,0,0.365753774946808,1.94228651156368,1.33461648913121,1.1598144313382,2.91426595835484,1.40363678077263,1.19370465096821,6.18384472043357,0.5647304101948,6.59643100472575,2.56636834063345,0.540219106755613,1.5299169235277,4.23285566725371,0.980593287015622,1.41405928260976,4.3187862765288,1.78227840196252,0.4226557275834,0.169927114687817,0.751871343838829,0.966868319603658,0,0.357107877211315,0.352894871715692,1.5245859670942,0,0.458729283404541,1.57673541466596,8.67743592062515,1.76777874496378,5.23620828408453,1.5870805215462,0.371995018166751,0,0,3.78499274505237,1.09265571963696,3.29416102629736,0.203977659483963,0,0.551369397209069,0,0.606229585745915,1.07185652062471,4.97501663675268,1.65492793379032,0.639701945702943,1.1903221573187,0.645889098360061,0.806971285846153,0.224263725161227,0.891060215894309,1.81905470062397,1.74173398317569,1.02669990325584,2.02056159043763,0.358611026963382,1.66330178273007,0.488419611665847,0.640364075266293,0,0.718601616852695,0,0.733448665097199,0.813792356631477,0,4.02547587182052,2.24397944612263|short_description=p6@CAPN2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1479 | |||
|TSSclassifier=S | |||
|UniProt=P17655,Q59EF6 | |||
|association_with_transcript=-9bp_to_NM_001748,uc001hob.3_5end | |||
|description=CAGE_peak_6_at_CAPN2_5end | |||
|id=chr1:223900098..223900109,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.19e-11!18;CL:0000789!5.19e-11!18;CL:0002420!5.19e-11!18;CL:0002419!5.19e-11!18;CL:0000790!5.19e-11!18;CL:0000625!5.33e-07!11;CL:0000084!7.66e-07!25;CL:0000827!7.66e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.37e-14;18!CL:0000789;3.37e-14;18!CL:0002419;3.37e-14;18!CL:0000084;3.65e-09;25!CL:0000625;9.42e-09;11!CL:0000147;2.89e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.83e-14,18;CL:0000789,3.83e-14,18;CL:0002420,3.83e-14,18;CL:0002419,3.83e-14,18;CL:0000790,3.83e-14,18;CL:0000542,2.88e-09,53;CL:0000051,2.88e-09,53;CL:0000084,3.93e-09,25;CL:0000827,3.93e-09,25;CL:0000838,4.16e-09,52;CL:0000625,8.25e-09,11;CL:0000147,3.21e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;3.37e-14;18!UBERON:0006601;2.60e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.36e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.37e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.28e-14!94;UBERON:0001016!2.28e-14!94;UBERON:0005743!2.66e-13!86;UBERON:0007023!1.66e-12!115;UBERON:0001017!3.94e-12!82;UBERON:0001049!6.90e-12!57;UBERON:0005068!6.90e-12!57;UBERON:0006241!6.90e-12!57;UBERON:0007135!6.90e-12!57;UBERON:0002346!8.03e-12!90;UBERON:0000955!6.10e-11!69;UBERON:0006238!6.10e-11!69;UBERON:0003075!4.25e-10!86;UBERON:0007284!4.25e-10!86;UBERON:0002780!6.04e-10!41;UBERON:0001890!6.04e-10!41;UBERON:0006240!6.04e-10!41;UBERON:0002616!7.57e-10!59;UBERON:0003080!8.08e-10!42;UBERON:0002020!1.25e-09!34;UBERON:0003528!1.25e-09!34;UBERON:0001893!1.86e-09!34;UBERON:0002791!3.08e-09!33;UBERON:0001869!5.46e-09!32;UBERON:0000924!2.09e-08!173;UBERON:0006601!2.09e-08!173;UBERON:0003056!6.14e-08!61;UBERON:0002619!1.34e-07!22;UBERON:0001950!1.72e-07!20;UBERON:0000956!2.50e-07!25;UBERON:0000203!2.50e-07!25;UBERON:0004121!3.25e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.11e-09;20!UBERON:0002619;1.42e-08;22!UBERON:0003528;3.89e-08;34!UBERON:0002020;3.89e-08;34!UBERON:0001893;6.63e-08;34!UBERON:0001869;6.87e-08;32!UBERON:0002791;8.01e-08;32!UBERON:0002780;1.27e-07;41!UBERON:0001890;1.27e-07;41!UBERON:0000956;1.54e-07;25!UBERON:0000203;1.54e-07;25!UBERON:0000073;5.57e-07;53!UBERON:0002616;5.57e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.27e-15,86;UBERON:0001016,4.91e-14,89;UBERON:0003075,4.92e-13,82;UBERON:0007284,4.92e-13,82;UBERON:0001017,6.71e-13,81;UBERON:0001049,2.19e-12,56;UBERON:0005068,2.19e-12,56;UBERON:0006241,2.19e-12,56;UBERON:0007135,2.19e-12,56;UBERON:0000073,5.48e-12,53;UBERON:0002616,5.48e-12,53;UBERON:0000955,1.64e-11,68;UBERON:0006238,1.64e-11,68;UBERON:0007023,4.12e-11,114;UBERON:0002780,6.67e-11,41;UBERON:0001890,6.67e-11,41;UBERON:0003080,6.67e-11,41;UBERON:0006240,6.67e-11,41;UBERON:0003056,8.10e-11,61;UBERON:0003528,2.44e-10,34;UBERON:0002020,2.44e-10,34;UBERON:0010371,2.95e-10,104;UBERON:0001893,3.94e-10,34;UBERON:0004121,4.64e-10,171;UBERON:0000924,4.64e-10,171;UBERON:0006601,4.64e-10,171;UBERON:0001869,1.62e-09,32;UBERON:0002791,1.80e-09,32;UBERON:0001950,1.84e-09,20;UBERON:0002619,4.74e-09,22;UBERON:0000956,6.92e-08,25;UBERON:0000203,6.92e-08,25 | |||
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| |||
|short_description=p6@CAPN2 | |||
}} |
Revision as of 03:52, 12 September 2013
Short description: | p6@CAPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CAPN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_NM_001748, uc001hob.3_5end |
EntrezGene: | CAPN2 |
HGNC: | 1479 |
UniProt: | P17655Q59EF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.83e-14 | 18 |
alpha-beta T cell | 3.83e-14 | 18 |
immature T cell | 3.83e-14 | 18 |
mature T cell | 3.83e-14 | 18 |
immature alpha-beta T cell | 3.83e-14 | 18 |
lymphocyte | 2.88e-09 | 53 |
common lymphoid progenitor | 2.88e-09 | 53 |
T cell | 3.93e-09 | 25 |
pro-T cell | 3.93e-09 | 25 |
lymphoid lineage restricted progenitor cell | 4.16e-09 | 52 |
CD8-positive, alpha-beta T cell | 8.25e-09 | 11 |
pigment cell | 3.21e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.27e-15 | 86 |
nervous system | 4.91e-14 | 89 |
neural plate | 4.92e-13 | 82 |
presumptive neural plate | 4.92e-13 | 82 |
central nervous system | 6.71e-13 | 81 |
neural tube | 2.19e-12 | 56 |
neural rod | 2.19e-12 | 56 |
future spinal cord | 2.19e-12 | 56 |
neural keel | 2.19e-12 | 56 |
regional part of nervous system | 5.48e-12 | 53 |
regional part of brain | 5.48e-12 | 53 |
brain | 1.64e-11 | 68 |
future brain | 1.64e-11 | 68 |
adult organism | 4.12e-11 | 114 |
regional part of forebrain | 6.67e-11 | 41 |
forebrain | 6.67e-11 | 41 |
anterior neural tube | 6.67e-11 | 41 |
future forebrain | 6.67e-11 | 41 |
pre-chordal neural plate | 8.10e-11 | 61 |
brain grey matter | 2.44e-10 | 34 |
gray matter | 2.44e-10 | 34 |
ecto-epithelium | 2.95e-10 | 104 |
telencephalon | 3.94e-10 | 34 |
ectoderm-derived structure | 4.64e-10 | 171 |
ectoderm | 4.64e-10 | 171 |
presumptive ectoderm | 4.64e-10 | 171 |
cerebral hemisphere | 1.62e-09 | 32 |
regional part of telencephalon | 1.80e-09 | 32 |
neocortex | 1.84e-09 | 20 |
regional part of cerebral cortex | 4.74e-09 | 22 |
cerebral cortex | 6.92e-08 | 25 |
pallium | 6.92e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.37e-07 | 10 |
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