FFCP PHASE1:Hg19::chr11:122073702..122073721,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=32bp_to_ENST00000534496_5end|description=CAGE_peak_1_at_ENST00000534496_5end|id=chr11:122073702..122073721,-|ontology_enrichment_celltype=CL:0000055!4.31e-26!180;CL:0000057!4.09e-20!75;CL:0002620!1.70e-13!23;CL:0000680!5.65e-07!57;CL:0000056!5.65e-07!57;CL:0000355!5.65e-07!57|ontology_enrichment_celltype_v019=CL:0002620;6.85e-20;23!CL:0000057;2.32e-07;73!CL:0002556;7.04e-07;6|ontology_enrichment_celltype_v019_2=CL:0002620,9.04e-20,23;CL:0000057,1.24e-19,76;CL:0002556,3.84e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.45e-07;5!DOID:450;2.45e-07;5!DOID:66;2.45e-07;5!DOID:423;2.45e-07;5!DOID:0080000;2.45e-07;5!DOID:11722;2.45e-07;5|ontology_enrichment_disease_v019_2=DOID:17,2.91e-07,5;DOID:450,2.91e-07,5;DOID:66,2.91e-07,5;DOID:423,2.91e-07,5;DOID:0080000,2.91e-07,5;DOID:11722,2.91e-07,5|ontology_enrichment_uberon=UBERON:0000475!1.07e-21!365;UBERON:0000033!4.16e-14!123;UBERON:0002616!1.47e-13!59;UBERON:0000153!1.64e-13!129;UBERON:0007811!1.64e-13!129;UBERON:0001049!1.92e-13!57;UBERON:0005068!1.92e-13!57;UBERON:0006241!1.92e-13!57;UBERON:0007135!1.92e-13!57;UBERON:0000481!5.41e-12!347;UBERON:0001017!1.06e-11!82;UBERON:0000955!1.69e-11!69;UBERON:0006238!1.69e-11!69;UBERON:0000914!3.64e-11!83;UBERON:0002329!3.64e-11!83;UBERON:0003077!3.64e-11!83;UBERON:0003059!3.64e-11!83;UBERON:0007282!3.64e-11!83;UBERON:0009618!3.64e-11!83;UBERON:0007285!3.64e-11!83;UBERON:0005743!4.08e-11!86;UBERON:0000073!4.60e-11!94;UBERON:0001016!4.60e-11!94;UBERON:0003075!5.56e-11!86;UBERON:0007284!5.56e-11!86;UBERON:0001893!9.66e-11!34;UBERON:0003080!1.29e-10!42;UBERON:0003102!2.09e-10!95;UBERON:0002791!2.11e-10!33;UBERON:0002346!2.45e-10!90;UBERON:0002020!2.55e-10!34;UBERON:0003528!2.55e-10!34;UBERON:0002780!2.83e-10!41;UBERON:0001890!2.83e-10!41;UBERON:0006240!2.83e-10!41;UBERON:0004121!2.94e-10!169;UBERON:0000468!3.95e-10!659;UBERON:0000924!6.67e-10!173;UBERON:0006601!6.67e-10!173;UBERON:0000119!8.23e-10!312;UBERON:0001869!1.51e-09!32;UBERON:0000483!2.75e-09!309;UBERON:0000477!3.71e-09!286;UBERON:0003056!1.07e-08!61;UBERON:0002097!5.24e-08!40;UBERON:0000486!8.90e-08!82;UBERON:0000467!8.99e-08!625;UBERON:0000480!1.24e-07!626;UBERON:0004290!3.05e-07!70;UBERON:0002385!5.96e-07!63;UBERON:0001015!5.96e-07!63;UBERON:0000383!5.96e-07!63;UBERON:0002199!6.26e-07!45;UBERON:0002416!6.26e-07!45;UBERON:0000956!7.33e-07!25;UBERON:0000203!7.33e-07!25|ontology_enrichment_uberon_v019=UBERON:0000075;2.58e-09;16!UBERON:0002097;5.30e-09;41!UBERON:0001893;3.42e-08;34!UBERON:0003528;6.06e-08;34!UBERON:0002020;6.06e-08;34!UBERON:0002791;9.88e-08;32!UBERON:0002199;1.09e-07;46!UBERON:0002416;1.09e-07;46!UBERON:0000125;1.80e-07;9!UBERON:0002308;1.80e-07;9!UBERON:0001869;1.93e-07;32!UBERON:0002780;2.31e-07;41!UBERON:0001890;2.31e-07;41!UBERON:0003129;2.39e-07;7!UBERON:0000073;6.57e-07;53!UBERON:0002616;6.57e-07;53!UBERON:0001758;7.04e-07;6!UBERON:0003672;7.04e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.56e-12,41;UBERON:0001049,2.05e-11,56;UBERON:0005068,2.05e-11,56;UBERON:0006241,2.05e-11,56;UBERON:0007135,2.05e-11,56;UBERON:0000073,6.41e-11,53;UBERON:0002616,6.41e-11,53;UBERON:0002199,6.53e-10,46;UBERON:0002416,6.53e-10,46;UBERON:0000075,1.09e-09,16;UBERON:0003102,1.16e-09,99;UBERON:0002780,1.53e-09,41;UBERON:0001890,1.53e-09,41;UBERON:0003080,1.53e-09,41;UBERON:0006240,1.53e-09,41;UBERON:0001893,1.60e-09,34;UBERON:0003075,1.76e-09,82;UBERON:0007284,1.76e-09,82;UBERON:0003528,4.85e-09,34;UBERON:0002020,4.85e-09,34;UBERON:0010314,6.52e-09,132;UBERON:0001016,1.26e-08,89;UBERON:0002346,1.60e-08,86;UBERON:0002791,2.73e-08,32;UBERON:0000955,3.39e-08,68;UBERON:0006238,3.39e-08,68;UBERON:0001017,3.83e-08,81;UBERON:0001869,4.83e-08,32;UBERON:0011137,5.07e-08,14;UBERON:0003129,1.29e-07,7;UBERON:0001758,3.84e-07,6;UBERON:0003672,3.84e-07,6;UBERON:0003056,4.80e-07,61;UBERON:0004121,5.67e-07,171;UBERON:0000924,5.67e-07,171;UBERON:0006601,5.67e-07,171;UBERON:0000125,5.81e-07,9;UBERON:0002308,5.81e-07,9;UBERON:0004905,7.35e-07,8;UBERON:0000982,7.35e-07,8;UBERON:0004770,7.35e-07,8;UBERON:0010371,7.35e-07,104|phase1_expression=2.90685406832891,1.2846031433459,1.83240725324762,2.00146596706261,2.23480547213644,2.61701557230111,0,0,0,0.245733936501509,0,0,0.263766978228454,2.84662611808107,2.31978163009541,1.34465029290355,0.602694528023977,1.46062018077475,0,0.369363174230364,1.02000345622126,0.626909442956176,2.28988789704845,0.684372125364421,0.627713197974014,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,2.50668955317945,1.73815822752988,0.795285947051099,0.486634870302636,0.945348171640679,1.55210578223795,1.14185221401064,0.3274476887442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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENST00000534496_5end | |||
|description=CAGE_peak_1_at_ENST00000534496_5end | |||
|id=chr11:122073702..122073721,- | |||
|ontology_enrichment_celltype=CL:0000055!4.31e-26!180;CL:0000057!4.09e-20!75;CL:0002620!1.70e-13!23;CL:0000680!5.65e-07!57;CL:0000056!5.65e-07!57;CL:0000355!5.65e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.85e-20;23!CL:0000057;2.32e-07;73!CL:0002556;7.04e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.04e-20,23;CL:0000057,1.24e-19,76;CL:0002556,3.84e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.45e-07;5!DOID:450;2.45e-07;5!DOID:66;2.45e-07;5!DOID:423;2.45e-07;5!DOID:0080000;2.45e-07;5!DOID:11722;2.45e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.91e-07,5;DOID:450,2.91e-07,5;DOID:66,2.91e-07,5;DOID:423,2.91e-07,5;DOID:0080000,2.91e-07,5;DOID:11722,2.91e-07,5 | |||
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| |||
|short_description=p1@ENST00000534496 | |||
}} |
Revision as of 16:17, 10 September 2013
Short description: | p1@ENST00000534496 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000534496_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000534496_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.04e-20 | 23 |
fibroblast | 1.24e-19 | 76 |
fibroblast of periodontium | 3.84e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.91e-07 | 5 |
myotonic disease | 2.91e-07 | 5 |
muscle tissue disease | 2.91e-07 | 5 |
myopathy | 2.91e-07 | 5 |
muscular disease | 2.91e-07 | 5 |
myotonic dystrophy | 2.91e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.