FFCP PHASE1:Hg19::chr14:23352410..23352440,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=161253|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20248|TSSclassifier=S|UniProt=B7Z5P1,Q8IYK8|association_with_transcript=0bp_to_ENST00000536884,NM_173527,uc001whf.1,uc010tnd.1_5end|description=CAGE_peak_1_at_REM2_5end|id=chr14:23352410..23352440,+|ontology_enrichment_celltype=CL:0000047!3.37e-15!8;CL:0000540!1.11e-11!6;CL:0000031!1.11e-11!6;CL:0000404!1.11e-11!6;CL:0002322!1.23e-08!5|ontology_enrichment_celltype_v019=CL:0000047;9.17e-18;2!CL:0000540;2.08e-13;6!CL:0000404;2.08e-13;6!CL:0002319;7.07e-11;25|ontology_enrichment_celltype_v019_2=CL:0000047,3.30e-26,8;CL:0000540,2.03e-13,6;CL:0000031,2.03e-13,6;CL:0000404,2.03e-13,6;CL:0002319,7.80e-11,25|ontology_enrichment_development_v019=UBERON:0010122;3.75e-18;2!CL:0000031;2.08e-13;6!UBERON:0006222;6.88e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.91e-43!82;UBERON:0005743!1.52e-40!86;UBERON:0000073!4.57e-40!94;UBERON:0001016!4.57e-40!94;UBERON:0001049!3.33e-39!57;UBERON:0005068!3.33e-39!57;UBERON:0006241!3.33e-39!57;UBERON:0007135!3.33e-39!57;UBERON:0002780!7.73e-35!41;UBERON:0001890!7.73e-35!41;UBERON:0006240!7.73e-35!41;UBERON:0003080!8.75e-34!42;UBERON:0002616!1.68e-33!59;UBERON:0000955!6.02e-30!69;UBERON:0006238!6.02e-30!69;UBERON:0001893!7.75e-27!34;UBERON:0001869!1.10e-26!32;UBERON:0003075!3.93e-26!86;UBERON:0007284!3.93e-26!86;UBERON:0002346!1.06e-25!90;UBERON:0002791!1.27e-25!33;UBERON:0002020!7.55e-25!34;UBERON:0003528!7.55e-25!34;UBERON:0003056!2.23e-23!61;UBERON:0000924!5.00e-21!173;UBERON:0006601!5.00e-21!173;UBERON:0004121!5.28e-21!169;UBERON:0007023!1.30e-19!115;UBERON:0002619!4.98e-19!22;UBERON:0001950!5.41e-19!20;UBERON:0000153!1.84e-16!129;UBERON:0007811!1.84e-16!129;UBERON:0000956!3.05e-16!25;UBERON:0000203!3.05e-16!25;UBERON:0000033!3.96e-16!123;UBERON:0000200!9.60e-11!6;UBERON:0009663!1.82e-10!7;UBERON:0002308!2.02e-10!9;UBERON:0000125!2.02e-10!9;UBERON:0001872!1.17e-09!5;UBERON:0001894!1.24e-09!7;UBERON:0006222!1.24e-09!7;UBERON:0000025!2.24e-09!194;UBERON:0000369!4.90e-09!4;UBERON:0002435!4.90e-09!4;UBERON:0000204!4.90e-09!4;UBERON:0010082!4.90e-09!4;UBERON:0002420!6.86e-08!9;UBERON:0007245!6.86e-08!9;UBERON:0010009!6.86e-08!9;UBERON:0010011!6.86e-08!9;UBERON:0000454!6.86e-08!9;UBERON:0005383!3.25e-07!3;UBERON:0005382!3.25e-07!3;UBERON:0003076!4.16e-07!15;UBERON:0003057!4.16e-07!15|ontology_enrichment_uberon_v019=UBERON:0000369;1.26e-34;4!UBERON:0002435;1.26e-34;4!UBERON:0000204;1.26e-34;4!UBERON:0009663;2.87e-30;7!UBERON:0005383;1.60e-26;3!UBERON:0005382;1.60e-26;3!UBERON:0002420;1.55e-23;9!UBERON:0000125;1.55e-23;9!UBERON:0007245;1.55e-23;9!UBERON:0002308;1.55e-23;9!UBERON:0010009;1.55e-23;9!UBERON:0010011;1.55e-23;9!UBERON:0000454;1.55e-23;9!UBERON:0001873;3.75e-18;2!UBERON:0002780;5.16e-15;41!UBERON:0001890;5.16e-15;41!UBERON:0002791;1.17e-11;32!UBERON:0001894;3.07e-11;7!UBERON:0001869;3.82e-11;32!UBERON:0003528;1.05e-10;34!UBERON:0002020;1.05e-10;34!UBERON:0001893;2.27e-10;34!UBERON:0001874;3.74e-10;1!UBERON:0000073;4.29e-10;53!UBERON:0002616;4.29e-10;53!UBERON:0001882;6.88e-10;1!UBERON:0005403;6.88e-10;1!UBERON:0001017;1.22e-09;75!UBERON:0000955;1.89e-08;68!UBERON:0001016;5.17e-08;83|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.26e-34,4;UBERON:0002435,1.26e-34,4;UBERON:0000204,1.26e-34,4;UBERON:0010082,1.26e-34,4;UBERON:0009663,2.40e-30,7;UBERON:0005383,1.47e-26,3;UBERON:0005382,1.47e-26,3;UBERON:0002420,1.35e-23,9;UBERON:0000125,1.35e-23,9;UBERON:0007245,1.35e-23,9;UBERON:0002308,1.35e-23,9;UBERON:0010009,1.35e-23,9;UBERON:0010011,1.35e-23,9;UBERON:0000454,1.35e-23,9;UBERON:0001017,4.82e-20,81;UBERON:0002780,2.54e-18,41;UBERON:0001890,2.54e-18,41;UBERON:0003080,2.54e-18,41;UBERON:0006240,2.54e-18,41;UBERON:0001873,3.45e-18,2;UBERON:0010122,3.45e-18,2;UBERON:0001016,7.95e-18,89;UBERON:0000073,6.59e-14,53;UBERON:0002616,6.59e-14,53;UBERON:0001049,4.29e-13,56;UBERON:0005068,4.29e-13,56;UBERON:0006241,4.29e-13,56;UBERON:0007135,4.29e-13,56;UBERON:0003056,6.52e-12,61;UBERON:0002791,1.01e-11,32;UBERON:0001869,1.01e-11,32;UBERON:0001894,2.87e-11,7;UBERON:0006222,2.87e-11,7;UBERON:0003528,5.23e-11,34;UBERON:0002020,5.23e-11,34;UBERON:0001893,5.23e-11,34;UBERON:0000955,2.26e-10,68;UBERON:0006238,2.26e-10,68;UBERON:0001874,3.74e-10,1;UBERON:0001882,7.50e-10,1;UBERON:0005403,7.50e-10,1;UBERON:0004121,1.64e-09,171;UBERON:0000924,1.64e-09,171;UBERON:0006601,1.64e-09,171;UBERON:0003075,1.67e-08,82;UBERON:0007284,1.67e-08,82;UBERON:0002346,4.85e-08,86;UBERON:0010371,7.64e-08,104;UBERON:0011216,1.19e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=161253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20248 | |||
|TSSclassifier=S | |||
|UniProt=B7Z5P1,Q8IYK8 | |||
|association_with_transcript=0bp_to_ENST00000536884,NM_173527,uc001whf.1,uc010tnd.1_5end | |||
|description=CAGE_peak_1_at_REM2_5end | |||
|id=chr14:23352410..23352440,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.37e-15!8;CL:0000540!1.11e-11!6;CL:0000031!1.11e-11!6;CL:0000404!1.11e-11!6;CL:0002322!1.23e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.17e-18;2!CL:0000540;2.08e-13;6!CL:0000404;2.08e-13;6!CL:0002319;7.07e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.30e-26,8;CL:0000540,2.03e-13,6;CL:0000031,2.03e-13,6;CL:0000404,2.03e-13,6;CL:0002319,7.80e-11,25 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.75e-18;2!CL:0000031;2.08e-13;6!UBERON:0006222;6.88e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.91e-43!82;UBERON:0005743!1.52e-40!86;UBERON:0000073!4.57e-40!94;UBERON:0001016!4.57e-40!94;UBERON:0001049!3.33e-39!57;UBERON:0005068!3.33e-39!57;UBERON:0006241!3.33e-39!57;UBERON:0007135!3.33e-39!57;UBERON:0002780!7.73e-35!41;UBERON:0001890!7.73e-35!41;UBERON:0006240!7.73e-35!41;UBERON:0003080!8.75e-34!42;UBERON:0002616!1.68e-33!59;UBERON:0000955!6.02e-30!69;UBERON:0006238!6.02e-30!69;UBERON:0001893!7.75e-27!34;UBERON:0001869!1.10e-26!32;UBERON:0003075!3.93e-26!86;UBERON:0007284!3.93e-26!86;UBERON:0002346!1.06e-25!90;UBERON:0002791!1.27e-25!33;UBERON:0002020!7.55e-25!34;UBERON:0003528!7.55e-25!34;UBERON:0003056!2.23e-23!61;UBERON:0000924!5.00e-21!173;UBERON:0006601!5.00e-21!173;UBERON:0004121!5.28e-21!169;UBERON:0007023!1.30e-19!115;UBERON:0002619!4.98e-19!22;UBERON:0001950!5.41e-19!20;UBERON:0000153!1.84e-16!129;UBERON:0007811!1.84e-16!129;UBERON:0000956!3.05e-16!25;UBERON:0000203!3.05e-16!25;UBERON:0000033!3.96e-16!123;UBERON:0000200!9.60e-11!6;UBERON:0009663!1.82e-10!7;UBERON:0002308!2.02e-10!9;UBERON:0000125!2.02e-10!9;UBERON:0001872!1.17e-09!5;UBERON:0001894!1.24e-09!7;UBERON:0006222!1.24e-09!7;UBERON:0000025!2.24e-09!194;UBERON:0000369!4.90e-09!4;UBERON:0002435!4.90e-09!4;UBERON:0000204!4.90e-09!4;UBERON:0010082!4.90e-09!4;UBERON:0002420!6.86e-08!9;UBERON:0007245!6.86e-08!9;UBERON:0010009!6.86e-08!9;UBERON:0010011!6.86e-08!9;UBERON:0000454!6.86e-08!9;UBERON:0005383!3.25e-07!3;UBERON:0005382!3.25e-07!3;UBERON:0003076!4.16e-07!15;UBERON:0003057!4.16e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.26e-34;4!UBERON:0002435;1.26e-34;4!UBERON:0000204;1.26e-34;4!UBERON:0009663;2.87e-30;7!UBERON:0005383;1.60e-26;3!UBERON:0005382;1.60e-26;3!UBERON:0002420;1.55e-23;9!UBERON:0000125;1.55e-23;9!UBERON:0007245;1.55e-23;9!UBERON:0002308;1.55e-23;9!UBERON:0010009;1.55e-23;9!UBERON:0010011;1.55e-23;9!UBERON:0000454;1.55e-23;9!UBERON:0001873;3.75e-18;2!UBERON:0002780;5.16e-15;41!UBERON:0001890;5.16e-15;41!UBERON:0002791;1.17e-11;32!UBERON:0001894;3.07e-11;7!UBERON:0001869;3.82e-11;32!UBERON:0003528;1.05e-10;34!UBERON:0002020;1.05e-10;34!UBERON:0001893;2.27e-10;34!UBERON:0001874;3.74e-10;1!UBERON:0000073;4.29e-10;53!UBERON:0002616;4.29e-10;53!UBERON:0001882;6.88e-10;1!UBERON:0005403;6.88e-10;1!UBERON:0001017;1.22e-09;75!UBERON:0000955;1.89e-08;68!UBERON:0001016;5.17e-08;83 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.523916301990851,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,1.14027160516907,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.579652024875384,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,1.01637849688985,5.20559415430487,7.73288812777695,3.18280904135263,4.46557126157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.689486746482929,0,0,3.54296554325536,8.68294358102937,0,0.331737779793674,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0.202203398942031,0,4.45102446878144,0,0,0,0,0,1.22429104652196,0,0.901940516486955,0,0,0,0,0,0.569219092059585,0,1.38847790668105,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,1.80126086612937,0.821432273351958,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.964518890790115,0.275078873194468,0.83088067605837,0,0,0.364497339948148,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.751145584238999,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0.468334905806882,5.94176217304383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.218419276384028,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,4.04644118107695,0,0.798169295285756,0,0.756215088665154,0.553258019713743,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.826747186004736,0.507326481551255,1.09394961803644,0,0,0,0.255524855279191,0.535701835878287,0,1.82089681270989,0.455324382702595,0,0,0,0.135939465953663,0.855046056317038,0,0,0,10.2125133445401,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,1.87151570769685,8.35593255677747,0,0.11294608203896,0,1.81155412280008,0,0.655678681511872,0,0,0.471353094203252,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.543931921527318,1.74540276136151,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.606229585745915,1.07185652062471,0.829169439458779,1.13776295448085,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.358611026963382,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@REM2 | |||
}} |
Revision as of 03:55, 11 September 2013
Short description: | p1@REM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_REM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536884, NM_173527, uc001whf.1, uc010tnd.1_5end |
EntrezGene: | REM2 |
HGNC: | 20248 |
UniProt: | B7Z5P1Q8IYK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.30e-26 | 8 |
neuron | 2.03e-13 | 6 |
neuroblast | 2.03e-13 | 6 |
electrically signaling cell | 2.03e-13 | 6 |
neural cell | 7.80e-11 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.