FFCP PHASE1:Hg19::chr17:7608511..7608538,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1949 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3228 | |||
|TSSclassifier=S | |||
|UniProt=Q15768 | |||
|association_with_transcript=0bp_to_ENST00000226091,NM_001406,uc002gis.2_5end | |||
|coexpression_cluster_id=C3689 | |||
|description=CAGE_peak_1_at_EFNB3_5end | |||
|id=chr17:7608511..7608538,+ | |||
|ontology_enrichment_celltype=CL:0000133!1.15e-13!59;CL:0000221!2.46e-13!71;CL:0000055!4.25e-11!180;CL:0002321!1.47e-10!248;CL:0000220!3.28e-10!246;CL:0000333!2.88e-09!41;CL:0002319!1.14e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.14e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.39e-14,59;CL:0000221,3.58e-13,72;CL:0000333,2.55e-09,41;CL:0002319,6.25e-08,25;CL:0002321,1.07e-07,250;CL:0000710,7.00e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000133;2.35e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.30e-28!173;UBERON:0006601!3.30e-28!173;UBERON:0004121!1.89e-26!169;UBERON:0001017!2.27e-25!82;UBERON:0005743!3.69e-25!86;UBERON:0000073!5.58e-24!94;UBERON:0001016!5.58e-24!94;UBERON:0000119!2.10e-22!312;UBERON:0000033!3.56e-22!123;UBERON:0002346!4.84e-22!90;UBERON:0000475!1.19e-21!365;UBERON:0000483!1.85e-21!309;UBERON:0000153!1.34e-20!129;UBERON:0007811!1.34e-20!129;UBERON:0000955!2.06e-20!69;UBERON:0006238!2.06e-20!69;UBERON:0003075!2.83e-20!86;UBERON:0007284!2.83e-20!86;UBERON:0003056!8.56e-19!61;UBERON:0001049!9.43e-18!57;UBERON:0005068!9.43e-18!57;UBERON:0006241!9.43e-18!57;UBERON:0007135!9.43e-18!57;UBERON:0002616!2.24e-17!59;UBERON:0000481!5.48e-16!347;UBERON:0001869!1.01e-15!32;UBERON:0003080!1.28e-15!42;UBERON:0002780!1.49e-15!41;UBERON:0001890!1.49e-15!41;UBERON:0006240!1.49e-15!41;UBERON:0001893!2.31e-15!34;UBERON:0002020!8.27e-15!34;UBERON:0003528!8.27e-15!34;UBERON:0002791!9.81e-15!33;UBERON:0000025!1.34e-14!194;UBERON:0004111!2.18e-14!241;UBERON:0000477!4.44e-13!286;UBERON:0000956!6.42e-13!25;UBERON:0000203!6.42e-13!25;UBERON:0002619!8.68e-13!22;UBERON:0000468!2.87e-12!659;UBERON:0001950!8.68e-12!20;UBERON:0000922!2.70e-11!612;UBERON:0000064!6.41e-11!219;UBERON:0002050!1.37e-09!605;UBERON:0005423!1.37e-09!605;UBERON:0000923!2.46e-09!604;UBERON:0005291!2.46e-09!604;UBERON:0006598!2.46e-09!604;UBERON:0002532!2.46e-09!604;UBERON:0000467!1.08e-07!625;UBERON:0000480!1.65e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.11e-16;32!UBERON:0001893;1.75e-15;34!UBERON:0003528;5.97e-15;34!UBERON:0002020;5.97e-15;34!UBERON:0002791;8.71e-15;32!UBERON:0002619;1.11e-14;22!UBERON:0000956;1.31e-14;25!UBERON:0000203;1.31e-14;25!UBERON:0001950;1.53e-13;20!UBERON:0002780;2.88e-12;41!UBERON:0001890;2.88e-12;41!UBERON:0000073;1.79e-11;53!UBERON:0002616;1.79e-11;53!UBERON:0001017;5.73e-11;75!UBERON:0000955;2.19e-10;68!UBERON:0001016;5.81e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.21e-27,81;UBERON:0004121,6.96e-26,171;UBERON:0000924,6.96e-26,171;UBERON:0006601,6.96e-26,171;UBERON:0001016,8.45e-26,89;UBERON:0002346,1.55e-22,86;UBERON:0000955,7.62e-22,68;UBERON:0006238,7.62e-22,68;UBERON:0003075,1.45e-20,82;UBERON:0007284,1.45e-20,82;UBERON:0010371,4.00e-19,104;UBERON:0000073,5.80e-19,53;UBERON:0002616,5.80e-19,53;UBERON:0001049,7.69e-19,56;UBERON:0005068,7.69e-19,56;UBERON:0006241,7.69e-19,56;UBERON:0007135,7.69e-19,56;UBERON:0003056,7.96e-19,61;UBERON:0001869,5.24e-18,32;UBERON:0001893,2.23e-17,34;UBERON:0002780,8.70e-17,41;UBERON:0001890,8.70e-17,41;UBERON:0003080,8.70e-17,41;UBERON:0006240,8.70e-17,41;UBERON:0003528,9.63e-17,34;UBERON:0002020,9.63e-17,34;UBERON:0002791,2.80e-16,32;UBERON:0000119,5.53e-16,309;UBERON:0000483,3.99e-15,306;UBERON:0010314,5.03e-15,132;UBERON:0000956,8.44e-15,25;UBERON:0000203,8.44e-15,25;UBERON:0002619,1.15e-14,22;UBERON:0011216,1.11e-13,223;UBERON:0001950,1.60e-13,20;UBERON:0000025,4.23e-12,192;UBERON:0004111,1.21e-09,240;UBERON:0000922,7.53e-08,592;UBERON:0005423,6.11e-07,581 | |||
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| |||
|short_description=p1@EFNB3 | |||
}} |
Revision as of 16:00, 11 September 2013
Short description: | p1@EFNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_EFNB3_5end |
Coexpression cluster: | C3689_brain_amygdala_temporal_duodenum_insula_putamen_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000226091, NM_001406, uc002gis.2_5end |
EntrezGene: | EFNB3 |
HGNC: | 3228 |
UniProt: | Q15768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.39e-14 | 59 |
ectodermal cell | 3.58e-13 | 72 |
migratory neural crest cell | 2.55e-09 | 41 |
neural cell | 6.25e-08 | 25 |
embryonic cell | 1.07e-07 | 250 |
neurecto-epithelial cell | 7.00e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.