FFCP PHASE1:Hg19::chr17:62972242..62972279,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1366|description=CAGE_peak_at_chr17:62972242..62972279,+|id=chr17:62972242..62972279,+|ontology_enrichment_celltype=CL:0000738!7.85e-66!140;CL:0000037!6.35e-57!172;CL:0000566!6.35e-57!172;CL:0000988!8.44e-55!182;CL:0002032!3.39e-52!165;CL:0000837!3.39e-52!165;CL:0002031!1.17e-49!124;CL:0002087!3.48e-48!119;CL:0000766!2.73e-39!76;CL:0002057!4.33e-37!42;CL:0000860!4.90e-36!45;CL:0000557!1.22e-34!71;CL:0000763!6.22e-33!112;CL:0000049!6.22e-33!112;CL:0000839!2.03e-30!70;CL:0002009!6.45e-30!65;CL:0002194!4.39e-28!63;CL:0000576!4.39e-28!63;CL:0000040!4.39e-28!63;CL:0000559!4.39e-28!63;CL:0000542!1.10e-16!53;CL:0000051!1.10e-16!53;CL:0000838!2.50e-16!52;CL:0000134!4.81e-12!358;CL:0002320!4.34e-11!365;CL:0002393!4.27e-09!9;CL:0002397!4.27e-09!9;CL:0000094!5.39e-09!8;CL:0000791!5.47e-09!18;CL:0000789!5.47e-09!18;CL:0002420!5.47e-09!18;CL:0002419!5.47e-09!18;CL:0000790!5.47e-09!18;CL:0000219!7.09e-09!390;CL:0000945!1.09e-08!24;CL:0000826!1.09e-08!24;CL:0000081!2.37e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.75e-46;33!CL:0002057;1.75e-46;33!CL:0000576;3.47e-35;48!CL:0000473;4.87e-34;39!CL:0000234;4.87e-34;39!CL:0000766;1.37e-32;69!CL:0002087;1.61e-18;104!CL:0000094;2.65e-18;8!CL:0000738;4.60e-17;136!CL:0000081;7.59e-16;11!CL:0002393;8.00e-14;6!CL:0002397;8.00e-14;6!CL:0000763;2.94e-13;100!CL:0000624;3.04e-12;6!CL:0000451;6.10e-12;10!CL:0000988;1.08e-11;177!CL:0000453;8.23e-11;5!CL:0000791;3.39e-10;18!CL:0000789;3.39e-10;18!CL:0002419;3.39e-10;18!CL:0000219;3.11e-09;193!CL:0000623;1.87e-08;3!CL:0000990;2.25e-08;8!CL:0000784;6.79e-08;3!CL:0000767;7.62e-08;3!CL:0000226;9.68e-08;3!CL:0000842;9.68e-08;3!CL:0000775;1.61e-07;3!CL:0000084;9.19e-07;25|ontology_enrichment_celltype_v019_2=CL:0000738,3.65e-89,136;CL:0000037,1.29e-74,168;CL:0000988,8.73e-72,177;CL:0000766,1.13e-68,72;CL:0000860,4.38e-68,42;CL:0002057,4.38e-68,42;CL:0002032,2.44e-65,161;CL:0000837,2.44e-65,161;CL:0000473,3.76e-61,48;CL:0000234,3.76e-61,48;CL:0002031,8.16e-61,120;CL:0002087,4.02e-59,115;CL:0000557,1.03e-58,67;CL:0000763,2.30e-55,108;CL:0000049,2.30e-55,108;CL:0002009,2.07e-53,61;CL:0000839,4.31e-51,66;CL:0002194,1.90e-49,59;CL:0000576,1.90e-49,59;CL:0000040,1.90e-49,59;CL:0000559,1.90e-49,59;CL:0000134,7.86e-26,354;CL:0002320,6.14e-25,361;CL:0000219,1.26e-22,386;CL:0002393,1.47e-18,9;CL:0002397,1.47e-18,9;CL:0000034,1.87e-18,441;CL:0000094,2.48e-18,8;CL:0000048,5.84e-18,427;CL:0000723,1.97e-17,433;CL:0000081,6.24e-16,11;CL:0000624,2.88e-12,6;CL:0000451,6.11e-12,10;CL:0000453,7.97e-11,5;CL:0000838,2.50e-10,52;CL:0000791,3.43e-10,18;CL:0000789,3.43e-10,18;CL:0002420,3.43e-10,18;CL:0002419,3.43e-10,18;CL:0000790,3.43e-10,18;CL:0000542,4.82e-10,53;CL:0000051,4.82e-10,53;CL:0000623,1.89e-08,3;CL:0000825,1.89e-08,3;CL:0000990,2.22e-08,8;CL:0000784,7.03e-08,3;CL:0000767,7.36e-08,3;CL:0000226,9.47e-08,3;CL:0000842,9.47e-08,3;CL:0000775,1.55e-07,3;CL:0000084,9.26e-07,25;CL:0000827,9.26e-07,25|ontology_enrichment_development_v019=CL:0002057;3.98e-49;42!CL:0000049;8.14e-15;108!CL:0000790;3.39e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.43e-32!102;UBERON:0003061!3.43e-32!102;UBERON:0002371!1.05e-30!80;UBERON:0002193!2.07e-28!112;UBERON:0001474!7.18e-27!86;UBERON:0002405!3.98e-21!115;UBERON:0004765!3.55e-20!101;UBERON:0001434!3.55e-20!101;UBERON:0002384!3.88e-10!375;UBERON:0003081!7.95e-09!216;UBERON:0002204!4.87e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.34e-52,76;UBERON:0002390,3.94e-48,98;UBERON:0003061,3.94e-48,98;UBERON:0001474,8.70e-48,82;UBERON:0002405,1.41e-42,93;UBERON:0004765,2.30e-42,90;UBERON:0002193,2.47e-42,108;UBERON:0001434,8.34e-37,100;UBERON:0002384,1.01e-23,371;UBERON:0003081,1.23e-17,203;UBERON:0002204,7.28e-17,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.0787107813136792,11.4075640286182,14.5855171276941,23.0676023740953,0,0,0,0.387336002901508,0.284338464974843,1.76160263600908,35.4557061460402,23.0626114590663,30.1645110295034,0,0.32389366601898,0,0.726991193897824,4.1566353805769,1.69808842831471,8.36744532860465,14.8020439687857,19.2017949954964,10.3569261235974,13.8326781525714,17.0267205519781,17.5820297175675,32.9197188627751,36.5651513804723,5.64727018627814,9.00590295190891,15.5059204267108,21.7319563583341,30.4882575722289,38.3602275479425,0.989553900560148,2.99195486432448,0.852449501065388,6.96502172708602,7.94339314567596,7.4738669879469,5.7787193009051,11.9941071236646,19.7641848681656,0.605399502633369,6.2607198117886,8.54448446090388,5.28138215779854,7.44115049877652,6.9187353017764,6.29040334420373,2.55300717830561,2.25015821375912,2.85012743741249,1.59133341759272,1.64397738388171,1.7599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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1366 | |||
|description=CAGE_peak_at_chr17:62972242..62972279,+ | |||
|id=chr17:62972242..62972279,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.85e-66!140;CL:0000037!6.35e-57!172;CL:0000566!6.35e-57!172;CL:0000988!8.44e-55!182;CL:0002032!3.39e-52!165;CL:0000837!3.39e-52!165;CL:0002031!1.17e-49!124;CL:0002087!3.48e-48!119;CL:0000766!2.73e-39!76;CL:0002057!4.33e-37!42;CL:0000860!4.90e-36!45;CL:0000557!1.22e-34!71;CL:0000763!6.22e-33!112;CL:0000049!6.22e-33!112;CL:0000839!2.03e-30!70;CL:0002009!6.45e-30!65;CL:0002194!4.39e-28!63;CL:0000576!4.39e-28!63;CL:0000040!4.39e-28!63;CL:0000559!4.39e-28!63;CL:0000542!1.10e-16!53;CL:0000051!1.10e-16!53;CL:0000838!2.50e-16!52;CL:0000134!4.81e-12!358;CL:0002320!4.34e-11!365;CL:0002393!4.27e-09!9;CL:0002397!4.27e-09!9;CL:0000094!5.39e-09!8;CL:0000791!5.47e-09!18;CL:0000789!5.47e-09!18;CL:0002420!5.47e-09!18;CL:0002419!5.47e-09!18;CL:0000790!5.47e-09!18;CL:0000219!7.09e-09!390;CL:0000945!1.09e-08!24;CL:0000826!1.09e-08!24;CL:0000081!2.37e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.75e-46;33!CL:0002057;1.75e-46;33!CL:0000576;3.47e-35;48!CL:0000473;4.87e-34;39!CL:0000234;4.87e-34;39!CL:0000766;1.37e-32;69!CL:0002087;1.61e-18;104!CL:0000094;2.65e-18;8!CL:0000738;4.60e-17;136!CL:0000081;7.59e-16;11!CL:0002393;8.00e-14;6!CL:0002397;8.00e-14;6!CL:0000763;2.94e-13;100!CL:0000624;3.04e-12;6!CL:0000451;6.10e-12;10!CL:0000988;1.08e-11;177!CL:0000453;8.23e-11;5!CL:0000791;3.39e-10;18!CL:0000789;3.39e-10;18!CL:0002419;3.39e-10;18!CL:0000219;3.11e-09;193!CL:0000623;1.87e-08;3!CL:0000990;2.25e-08;8!CL:0000784;6.79e-08;3!CL:0000767;7.62e-08;3!CL:0000226;9.68e-08;3!CL:0000842;9.68e-08;3!CL:0000775;1.61e-07;3!CL:0000084;9.19e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.65e-89,136;CL:0000037,1.29e-74,168;CL:0000988,8.73e-72,177;CL:0000766,1.13e-68,72;CL:0000860,4.38e-68,42;CL:0002057,4.38e-68,42;CL:0002032,2.44e-65,161;CL:0000837,2.44e-65,161;CL:0000473,3.76e-61,48;CL:0000234,3.76e-61,48;CL:0002031,8.16e-61,120;CL:0002087,4.02e-59,115;CL:0000557,1.03e-58,67;CL:0000763,2.30e-55,108;CL:0000049,2.30e-55,108;CL:0002009,2.07e-53,61;CL:0000839,4.31e-51,66;CL:0002194,1.90e-49,59;CL:0000576,1.90e-49,59;CL:0000040,1.90e-49,59;CL:0000559,1.90e-49,59;CL:0000134,7.86e-26,354;CL:0002320,6.14e-25,361;CL:0000219,1.26e-22,386;CL:0002393,1.47e-18,9;CL:0002397,1.47e-18,9;CL:0000034,1.87e-18,441;CL:0000094,2.48e-18,8;CL:0000048,5.84e-18,427;CL:0000723,1.97e-17,433;CL:0000081,6.24e-16,11;CL:0000624,2.88e-12,6;CL:0000451,6.11e-12,10;CL:0000453,7.97e-11,5;CL:0000838,2.50e-10,52;CL:0000791,3.43e-10,18;CL:0000789,3.43e-10,18;CL:0002420,3.43e-10,18;CL:0002419,3.43e-10,18;CL:0000790,3.43e-10,18;CL:0000542,4.82e-10,53;CL:0000051,4.82e-10,53;CL:0000623,1.89e-08,3;CL:0000825,1.89e-08,3;CL:0000990,2.22e-08,8;CL:0000784,7.03e-08,3;CL:0000767,7.36e-08,3;CL:0000226,9.47e-08,3;CL:0000842,9.47e-08,3;CL:0000775,1.55e-07,3;CL:0000084,9.26e-07,25;CL:0000827,9.26e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.98e-49;42!CL:0000049;8.14e-15;108!CL:0000790;3.39e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.43e-32!102;UBERON:0003061!3.43e-32!102;UBERON:0002371!1.05e-30!80;UBERON:0002193!2.07e-28!112;UBERON:0001474!7.18e-27!86;UBERON:0002405!3.98e-21!115;UBERON:0004765!3.55e-20!101;UBERON:0001434!3.55e-20!101;UBERON:0002384!3.88e-10!375;UBERON:0003081!7.95e-09!216;UBERON:0002204!4.87e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.34e-52,76;UBERON:0002390,3.94e-48,98;UBERON:0003061,3.94e-48,98;UBERON:0001474,8.70e-48,82;UBERON:0002405,1.41e-42,93;UBERON:0004765,2.30e-42,90;UBERON:0002193,2.47e-42,108;UBERON:0001434,8.34e-37,100;UBERON:0002384,1.01e-23,371;UBERON:0003081,1.23e-17,203;UBERON:0002204,7.28e-17,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.0787107813136792,11.4075640286182,14.5855171276941,23.0676023740953,0,0,0,0.387336002901508,0.284338464974843,1.76160263600908,35.4557061460402,23.0626114590663,30.1645110295034,0,0.32389366601898,0,0.726991193897824,4.1566353805769,1.69808842831471,8.36744532860465,14.8020439687857,19.2017949954964,10.3569261235974,13.8326781525714,17.0267205519781,17.5820297175675,32.9197188627751,36.5651513804723,5.64727018627814,9.00590295190891,15.5059204267108,21.7319563583341,30.4882575722289,38.3602275479425,0.989553900560148,2.99195486432448,0.852449501065388,6.96502172708602,7.94339314567596,7.4738669879469,5.7787193009051,11.9941071236646,19.7641848681656,0.605399502633369,6.2607198117886,8.54448446090388,5.28138215779854,7.44115049877652,6.9187353017764,6.29040334420373,2.55300717830561,2.25015821375912,2.85012743741249,1.59133341759272,1.64397738388171,1.75996244461323,0,0,2.13365111283254,1.60158394814405,0,0.661044872784862,0.954053754535364,9.10740750575117,4.69789751496751,12.6150165281326,29.0776922873857,14.0127140745384,0.790152254325231,9.83548850569165,7.8602152549833,7.19605246498282,0.167186495390678,1.62961133316795,1.4203434172042,0,0.334231370655521,2.3568472597987,0.664601683750863,1.62482318259009,0.384273959177026,0.910415432919148,0.328875809207352,0.552700035571697,0.869409257205157,0.444859689486181,0.267540828089713,0,0.113309342697566,4.98186641682498,1.37450978193052,2.02415753615602,1.27426165729639,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0.821127996921047,30.4426182269346,20.5928950753301,12.8893719455691,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0.132957960518865,20.2717030659541,14.2998727695032,14.1153850505235,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,86.9750755078017,31.022421131866,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0.383382679165211,0.985326475791887,0.44024217006613,25.7086863270557,11.38547631994,16.4115163454294,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,27.9783679486737,30.4034880551919,33.2408463964548,0,0,0,0.167516265334349,0,13.4821264310493,5.9832291840805,16.5766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89102512328416,15.9628508605776,17.0764092485511,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0.912938716132769,0,2.50634477090067,0,0,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0.23874448473769,1.18785872333055,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0.246169610922139,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0,0,1.77912677208373,0.247127877893006,0.626531697032732,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0.30607276163049,0.252746318513952,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,2.55493176133945,0,0.262887354279314,0,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,15.9731463001565,45.654315318919,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0.730755590285376,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,2.14346339723327,1.19578356282027,1.79921933681429,0,0,0,0.19998739585493,0,0.688859918643263,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0.0642292250964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| |||
|short_description=p@chr17:62972242..62972279,+ | |||
}} |
Revision as of 15:05, 11 September 2013
Short description: | p@chr17:62972242..62972279, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:62972242..62972279, + |
Coexpression cluster: | C1366_Eosinophils_CD14_immature_Natural_CD34_CD8_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.34e-52 | 76 |
hematopoietic system | 3.94e-48 | 98 |
blood island | 3.94e-48 | 98 |
bone element | 8.70e-48 | 82 |
immune system | 1.41e-42 | 93 |
skeletal element | 2.30e-42 | 90 |
hemolymphoid system | 2.47e-42 | 108 |
skeletal system | 8.34e-37 | 100 |
connective tissue | 1.01e-23 | 371 |
lateral plate mesoderm | 1.23e-17 | 203 |
musculoskeletal system | 7.28e-17 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.