FFCP PHASE1:Hg19::chr2:158485265..158485286,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=130399|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18123|TSSclassifier=S|UniProt=|association_with_transcript=-26bp_to_ENST00000335450,ENST00000348328_5end|coexpression_cluster_id=C29|description=CAGE_peak_4_at_ACVR1C_5end|id=chr2:158485265..158485286,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000453;7.79e-16;5!CL:0000136;6.15e-11;13!CL:0000990;4.94e-09;8!CL:0000451;1.79e-07;10|ontology_enrichment_celltype_v019_2=CL:0000453,5.48e-16,5;CL:0000136,1.70e-09,15;CL:0000990,4.08e-09,8;CL:0000451,1.53e-07,10|ontology_enrichment_development_v019=UBERON:0006222;1.61e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.37e-47!57;UBERON:0005068!2.37e-47!57;UBERON:0006241!2.37e-47!57;UBERON:0007135!2.37e-47!57;UBERON:0002616!4.34e-38!59;UBERON:0007023!7.10e-37!115;UBERON:0003080!9.14e-36!42;UBERON:0002780!4.26e-34!41;UBERON:0001890!4.26e-34!41;UBERON:0006240!4.26e-34!41;UBERON:0001017!6.50e-34!82;UBERON:0005743!2.80e-33!86;UBERON:0000955!3.56e-32!69;UBERON:0006238!3.56e-32!69;UBERON:0003075!7.53e-32!86;UBERON:0007284!7.53e-32!86;UBERON:0001893!4.00e-31!34;UBERON:0002020!4.05e-31!34;UBERON:0003528!4.05e-31!34;UBERON:0000073!2.98e-30!94;UBERON:0001016!2.98e-30!94;UBERON:0002346!7.95e-30!90;UBERON:0002791!1.18e-29!33;UBERON:0001869!6.98e-28!32;UBERON:0003056!3.34e-23!61;UBERON:0002619!8.37e-23!22;UBERON:0001950!1.17e-19!20;UBERON:0000956!1.57e-19!25;UBERON:0000203!1.57e-19!25;UBERON:0000033!9.06e-17!123;UBERON:0000153!2.80e-16!129;UBERON:0007811!2.80e-16!129;UBERON:0004121!6.27e-15!169;UBERON:0000924!2.89e-14!173;UBERON:0006601!2.89e-14!173;UBERON:0002298!3.97e-14!8;UBERON:0002308!1.12e-13!9;UBERON:0000125!1.12e-13!9;UBERON:0003076!2.29e-12!15;UBERON:0003057!2.29e-12!15;UBERON:0000200!1.91e-11!6;UBERON:0002420!1.37e-10!9;UBERON:0007245!1.37e-10!9;UBERON:0010009!1.37e-10!9;UBERON:0010011!1.37e-10!9;UBERON:0000454!1.37e-10!9;UBERON:0009663!1.88e-10!7;UBERON:0000025!4.43e-10!194;UBERON:0001871!2.53e-08!7;UBERON:0004733!3.53e-08!12;UBERON:0002028!3.53e-08!12;UBERON:0007277!3.53e-08!12;UBERON:0004732!1.96e-07!13;UBERON:0000064!4.12e-07!219;UBERON:0000349!9.28e-07!5|ontology_enrichment_uberon_v019=UBERON:0000125;2.24e-32;9!UBERON:0002308;2.24e-32;9!UBERON:0009663;2.96e-29;7!UBERON:0002420;9.40e-23;9!UBERON:0007245;9.40e-23;9!UBERON:0010009;9.40e-23;9!UBERON:0010011;9.40e-23;9!UBERON:0000454;9.40e-23;9!UBERON:0000369;5.83e-19;4!UBERON:0002435;5.83e-19;4!UBERON:0000204;5.83e-19;4!UBERON:0002780;4.17e-15;41!UBERON:0001890;4.17e-15;41!UBERON:0002791;1.12e-14;32!UBERON:0003528;1.13e-14;34!UBERON:0002020;1.13e-14;34!UBERON:0005383;7.35e-12;3!UBERON:0005382;7.35e-12;3!UBERON:0001893;2.37e-11;34!UBERON:0001869;3.75e-11;32!UBERON:0001882;1.61e-09;1!UBERON:0001874;1.61e-09;1!UBERON:0002038;1.61e-09;1!UBERON:0009661;1.61e-09;1!UBERON:0002950;1.61e-09;1!UBERON:0005403;1.61e-09;1!UBERON:0001891;1.61e-09;1!UBERON:0000073;1.07e-08;53!UBERON:0002616;1.07e-08;53!UBERON:0000955;6.03e-08;68!UBERON:0001017;1.33e-07;75!UBERON:0000349;1.41e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000125,3.69e-32,9;UBERON:0002308,3.69e-32,9;UBERON:0009663,4.48e-29,7;UBERON:0002420,1.30e-22,9;UBERON:0007245,1.30e-22,9;UBERON:0010009,1.30e-22,9;UBERON:0010011,1.30e-22,9;UBERON:0000454,1.30e-22,9;UBERON:0000369,7.48e-19,4;UBERON:0002435,7.48e-19,4;UBERON:0000204,7.48e-19,4;UBERON:0010082,7.48e-19,4;UBERON:0002780,4.59e-18,41;UBERON:0001890,4.59e-18,41;UBERON:0003080,4.59e-18,41;UBERON:0006240,4.59e-18,41;UBERON:0003528,1.18e-17,34;UBERON:0002020,1.18e-17,34;UBERON:0000073,1.25e-16,53;UBERON:0002616,1.25e-16,53;UBERON:0001049,1.16e-15,56;UBERON:0005068,1.16e-15,56;UBERON:0006241,1.16e-15,56;UBERON:0007135,1.16e-15,56;UBERON:0002791,6.75e-15,32;UBERON:0001893,5.47e-14,34;UBERON:0000955,2.01e-12,68;UBERON:0006238,2.01e-12,68;UBERON:0001017,3.31e-12,81;UBERON:0003056,9.63e-12,61;UBERON:0005383,9.70e-12,3;UBERON:0005382,9.70e-12,3;UBERON:0001869,1.70e-11,32;UBERON:0001016,8.14e-11,89;UBERON:0003075,3.38e-10,82;UBERON:0007284,3.38e-10,82;UBERON:0007023,5.96e-10,114;UBERON:0002346,1.20e-09,86;UBERON:0001882,1.48e-09,1;UBERON:0005403,1.48e-09,1;UBERON:0002038,2.08e-09,1;UBERON:0009661,2.08e-09,1;UBERON:0002950,2.08e-09,1;UBERON:0001891,2.08e-09,1;UBERON:0009616,2.08e-09,1;UBERON:0010286,2.08e-09,1;UBERON:0001874,2.26e-09,1;UBERON:0010371,2.92e-09,104;UBERON:0000349,1.36e-07,5;UBERON:0010314,6.85e-07,132|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=130399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18123 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-26bp_to_ENST00000335450,ENST00000348328_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_4_at_ACVR1C_5end | |||
|id=chr2:158485265..158485286,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;7.79e-16;5!CL:0000136;6.15e-11;13!CL:0000990;4.94e-09;8!CL:0000451;1.79e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.48e-16,5;CL:0000136,1.70e-09,15;CL:0000990,4.08e-09,8;CL:0000451,1.53e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.61e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.37e-47!57;UBERON:0005068!2.37e-47!57;UBERON:0006241!2.37e-47!57;UBERON:0007135!2.37e-47!57;UBERON:0002616!4.34e-38!59;UBERON:0007023!7.10e-37!115;UBERON:0003080!9.14e-36!42;UBERON:0002780!4.26e-34!41;UBERON:0001890!4.26e-34!41;UBERON:0006240!4.26e-34!41;UBERON:0001017!6.50e-34!82;UBERON:0005743!2.80e-33!86;UBERON:0000955!3.56e-32!69;UBERON:0006238!3.56e-32!69;UBERON:0003075!7.53e-32!86;UBERON:0007284!7.53e-32!86;UBERON:0001893!4.00e-31!34;UBERON:0002020!4.05e-31!34;UBERON:0003528!4.05e-31!34;UBERON:0000073!2.98e-30!94;UBERON:0001016!2.98e-30!94;UBERON:0002346!7.95e-30!90;UBERON:0002791!1.18e-29!33;UBERON:0001869!6.98e-28!32;UBERON:0003056!3.34e-23!61;UBERON:0002619!8.37e-23!22;UBERON:0001950!1.17e-19!20;UBERON:0000956!1.57e-19!25;UBERON:0000203!1.57e-19!25;UBERON:0000033!9.06e-17!123;UBERON:0000153!2.80e-16!129;UBERON:0007811!2.80e-16!129;UBERON:0004121!6.27e-15!169;UBERON:0000924!2.89e-14!173;UBERON:0006601!2.89e-14!173;UBERON:0002298!3.97e-14!8;UBERON:0002308!1.12e-13!9;UBERON:0000125!1.12e-13!9;UBERON:0003076!2.29e-12!15;UBERON:0003057!2.29e-12!15;UBERON:0000200!1.91e-11!6;UBERON:0002420!1.37e-10!9;UBERON:0007245!1.37e-10!9;UBERON:0010009!1.37e-10!9;UBERON:0010011!1.37e-10!9;UBERON:0000454!1.37e-10!9;UBERON:0009663!1.88e-10!7;UBERON:0000025!4.43e-10!194;UBERON:0001871!2.53e-08!7;UBERON:0004733!3.53e-08!12;UBERON:0002028!3.53e-08!12;UBERON:0007277!3.53e-08!12;UBERON:0004732!1.96e-07!13;UBERON:0000064!4.12e-07!219;UBERON:0000349!9.28e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;2.24e-32;9!UBERON:0002308;2.24e-32;9!UBERON:0009663;2.96e-29;7!UBERON:0002420;9.40e-23;9!UBERON:0007245;9.40e-23;9!UBERON:0010009;9.40e-23;9!UBERON:0010011;9.40e-23;9!UBERON:0000454;9.40e-23;9!UBERON:0000369;5.83e-19;4!UBERON:0002435;5.83e-19;4!UBERON:0000204;5.83e-19;4!UBERON:0002780;4.17e-15;41!UBERON:0001890;4.17e-15;41!UBERON:0002791;1.12e-14;32!UBERON:0003528;1.13e-14;34!UBERON:0002020;1.13e-14;34!UBERON:0005383;7.35e-12;3!UBERON:0005382;7.35e-12;3!UBERON:0001893;2.37e-11;34!UBERON:0001869;3.75e-11;32!UBERON:0001882;1.61e-09;1!UBERON:0001874;1.61e-09;1!UBERON:0002038;1.61e-09;1!UBERON:0009661;1.61e-09;1!UBERON:0002950;1.61e-09;1!UBERON:0005403;1.61e-09;1!UBERON:0001891;1.61e-09;1!UBERON:0000073;1.07e-08;53!UBERON:0002616;1.07e-08;53!UBERON:0000955;6.03e-08;68!UBERON:0001017;1.33e-07;75!UBERON:0000349;1.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,3.69e-32,9;UBERON:0002308,3.69e-32,9;UBERON:0009663,4.48e-29,7;UBERON:0002420,1.30e-22,9;UBERON:0007245,1.30e-22,9;UBERON:0010009,1.30e-22,9;UBERON:0010011,1.30e-22,9;UBERON:0000454,1.30e-22,9;UBERON:0000369,7.48e-19,4;UBERON:0002435,7.48e-19,4;UBERON:0000204,7.48e-19,4;UBERON:0010082,7.48e-19,4;UBERON:0002780,4.59e-18,41;UBERON:0001890,4.59e-18,41;UBERON:0003080,4.59e-18,41;UBERON:0006240,4.59e-18,41;UBERON:0003528,1.18e-17,34;UBERON:0002020,1.18e-17,34;UBERON:0000073,1.25e-16,53;UBERON:0002616,1.25e-16,53;UBERON:0001049,1.16e-15,56;UBERON:0005068,1.16e-15,56;UBERON:0006241,1.16e-15,56;UBERON:0007135,1.16e-15,56;UBERON:0002791,6.75e-15,32;UBERON:0001893,5.47e-14,34;UBERON:0000955,2.01e-12,68;UBERON:0006238,2.01e-12,68;UBERON:0001017,3.31e-12,81;UBERON:0003056,9.63e-12,61;UBERON:0005383,9.70e-12,3;UBERON:0005382,9.70e-12,3;UBERON:0001869,1.70e-11,32;UBERON:0001016,8.14e-11,89;UBERON:0003075,3.38e-10,82;UBERON:0007284,3.38e-10,82;UBERON:0007023,5.96e-10,114;UBERON:0002346,1.20e-09,86;UBERON:0001882,1.48e-09,1;UBERON:0005403,1.48e-09,1;UBERON:0002038,2.08e-09,1;UBERON:0009661,2.08e-09,1;UBERON:0002950,2.08e-09,1;UBERON:0001891,2.08e-09,1;UBERON:0009616,2.08e-09,1;UBERON:0010286,2.08e-09,1;UBERON:0001874,2.26e-09,1;UBERON:0010371,2.92e-09,104;UBERON:0000349,1.36e-07,5;UBERON:0010314,6.85e-07,132 | |||
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|short_description=p4@ACVR1C | |||
}} |
Revision as of 14:15, 12 September 2013
Short description: | p4@ACVR1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ACVR1C_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -26bp_to_ENST00000335450, ENST00000348328_5end |
EntrezGene: | ACVR1C |
HGNC: | 18123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.48e-16 | 5 |
fat cell | 1.70e-09 | 15 |
conventional dendritic cell | 4.08e-09 | 8 |
dendritic cell | 1.53e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.