FFCP PHASE1:Hg19::chr22:18260077..18260127,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=200298|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26875|TSSclassifier=S|UniProt=Q8N1L1|association_with_transcript=0bp_to_AK097861_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_LINC00528_5end|id=chr22:18260077..18260127,+|ontology_enrichment_celltype=CL:0000037!2.97e-93!172;CL:0000566!2.97e-93!172;CL:0000988!2.06e-89!182;CL:0002032!2.24e-87!165;CL:0000837!2.24e-87!165;CL:0000738!9.55e-81!140;CL:0002087!3.38e-67!119;CL:0002031!2.81e-66!124;CL:0000763!2.52e-50!112;CL:0000049!2.52e-50!112;CL:0000766!8.71e-39!76;CL:0002057!1.26e-34!42;CL:0000557!6.13e-33!71;CL:0000839!5.47e-32!70;CL:0002009!1.33e-31!65;CL:0000542!1.42e-31!53;CL:0000051!1.42e-31!53;CL:0000838!3.46e-31!52;CL:0002194!6.15e-31!63;CL:0000576!6.15e-31!63;CL:0000040!6.15e-31!63;CL:0000559!6.15e-31!63;CL:0000860!6.58e-31!45;CL:0000134!8.02e-19!358;CL:0002320!1.89e-17!365;CL:0000084!2.19e-15!25;CL:0000827!2.19e-15!25;CL:0000945!2.49e-14!24;CL:0000826!2.49e-14!24;CL:0000791!6.40e-13!18;CL:0000789!6.40e-13!18;CL:0002420!6.40e-13!18;CL:0002419!6.40e-13!18;CL:0000790!6.40e-13!18;CL:0000219!8.43e-13!390;CL:0000048!7.43e-10!430;CL:0000236!2.32e-09!14;CL:0000034!3.36e-09!444;CL:0000625!3.76e-09!11;CL:0000723!4.20e-09!436;CL:0000094!9.45e-09!8;CL:0002393!4.02e-08!9;CL:0002397!4.02e-08!9|ontology_enrichment_celltype_v019=CL:0000860;3.85e-33;33!CL:0002057;3.85e-33;33!CL:0000576;2.51e-30;48!CL:0000473;3.95e-27;39!CL:0000234;3.95e-27;39!CL:0002087;6.29e-26;104!CL:0000766;2.55e-24;69!CL:0000542;5.47e-21;53!CL:0000738;4.07e-20;136!CL:0000084;1.64e-17;25!CL:0000763;2.31e-17;100!CL:0000945;3.88e-17;24!CL:0000791;1.36e-16;18!CL:0000789;1.36e-16;18!CL:0002419;1.36e-16;18!CL:0000988;5.94e-16;177!CL:0000625;1.21e-11;11!CL:0000094;4.14e-11;8!CL:0000236;6.69e-10;13!CL:0000219;5.64e-09;193!CL:0002393;7.07e-08;6!CL:0002397;7.07e-08;6!CL:0000081;2.09e-07;11|ontology_enrichment_celltype_v019_2=CL:0000037,3.52e-104,168;CL:0000738,1.78e-102,136;CL:0002032,1.01e-96,161;CL:0000837,1.01e-96,161;CL:0000988,1.50e-96,177;CL:0002087,2.56e-87,115;CL:0002031,2.44e-82,120;CL:0000766,8.35e-54,72;CL:0000763,2.77e-53,108;CL:0000049,2.77e-53,108;CL:0000860,1.42e-45,42;CL:0002057,1.42e-45,42;CL:0000473,1.06e-44,48;CL:0000234,1.06e-44,48;CL:0000557,1.88e-44,67;CL:0002194,4.75e-43,59;CL:0000576,4.75e-43,59;CL:0000040,4.75e-43,59;CL:0000559,4.75e-43,59;CL:0002009,1.48e-42,61;CL:0000839,3.77e-42,66;CL:0000542,1.61e-37,53;CL:0000051,1.61e-37,53;CL:0000838,5.38e-37,52;CL:0000134,2.76e-28,354;CL:0002320,6.58e-27,361;CL:0000219,4.20e-22,386;CL:0000084,1.87e-17,25;CL:0000827,1.87e-17,25;CL:0000048,2.40e-17,427;CL:0000945,3.53e-17,24;CL:0000826,3.53e-17,24;CL:0000034,4.89e-17,441;CL:0000791,1.18e-16,18;CL:0000789,1.18e-16,18;CL:0002420,1.18e-16,18;CL:0002419,1.18e-16,18;CL:0000790,1.18e-16,18;CL:0000723,1.51e-16,433;CL:0000625,1.20e-11,11;CL:0000094,4.07e-11,8;CL:0000236,1.45e-10,14;CL:0002393,2.78e-10,9;CL:0002397,2.78e-10,9;CL:0000081,2.06e-07,11|ontology_enrichment_development_v019=CL:0002057;1.10e-32;42!CL:0000051;5.47e-21;53!CL:0000790;1.36e-16;18!CL:0000049;1.54e-15;108|ontology_enrichment_disease=DOID:2531!7.48e-17!51;DOID:0060083!7.48e-17!51;DOID:1240!9.51e-14!39;DOID:8692!3.37e-10!31|ontology_enrichment_disease_v019=DOID:1240;2.05e-08;39!DOID:2531;4.66e-08;51!DOID:0060083;4.66e-08;51|ontology_enrichment_disease_v019_2=DOID:2531,5.31e-12,51;DOID:0060083,5.31e-12,51;DOID:1240,5.35e-10,39|ontology_enrichment_uberon=UBERON:0002193!5.06e-44!112;UBERON:0002390!1.81e-42!102;UBERON:0003061!1.81e-42!102;UBERON:0002405!1.01e-29!115;UBERON:0002371!1.27e-28!80;UBERON:0001474!8.78e-25!86;UBERON:0004765!4.43e-18!101;UBERON:0001434!4.43e-18!101;UBERON:0002384!2.71e-16!375;UBERON:0000178!6.97e-11!15;UBERON:0000179!6.97e-11!15;UBERON:0000463!6.97e-11!15;UBERON:0003081!7.17e-11!216|ontology_enrichment_uberon_v019=UBERON:0000178;4.54e-10;15!UBERON:0000179;4.54e-10;15!UBERON:0000463;4.54e-10;15!UBERON:0002390;1.71e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-54,98;UBERON:0003061,1.02e-54,98;UBERON:0002193,1.64e-52,108;UBERON:0002405,1.02e-42,93;UBERON:0002371,1.33e-39,76;UBERON:0001474,4.04e-35,82;UBERON:0004765,4.15e-30,90;UBERON:0002384,4.88e-25,371;UBERON:0001434,5.03e-25,100;UBERON:0003081,3.05e-16,203;UBERON:0000178,4.33e-10,15;UBERON:0000179,4.33e-10,15;UBERON:0000463,4.33e-10,15;UBERON:0002204,3.17e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,2.70931945184821,3.38456359648821,18.4881210118985,18.8076405067634,10.8371286321253,0,0,0,6.27484324700443,4.69158467208491,3.22960483268332,12.1878989877013,16.6451891400218,13.0206522429511,4.03047853631864,2.59114932815184,2.83333124397605,7.85150489409649,4.91238726795452,9.94594650870046,18.1294648786434,7.40102198439286,15.7950249156503,11.507695692886,12.5518746199259,12.0605937243178,34.1298223929252,17.4280864567633,23.0225027210381,12.8004790888971,9.27880910196676,15.0564734578207,30.9144731294612,19.57667065164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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=200298 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26875 | |||
|TSSclassifier=S | |||
|UniProt=Q8N1L1 | |||
|association_with_transcript=0bp_to_AK097861_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_LINC00528_5end | |||
|id=chr22:18260077..18260127,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.97e-93!172;CL:0000566!2.97e-93!172;CL:0000988!2.06e-89!182;CL:0002032!2.24e-87!165;CL:0000837!2.24e-87!165;CL:0000738!9.55e-81!140;CL:0002087!3.38e-67!119;CL:0002031!2.81e-66!124;CL:0000763!2.52e-50!112;CL:0000049!2.52e-50!112;CL:0000766!8.71e-39!76;CL:0002057!1.26e-34!42;CL:0000557!6.13e-33!71;CL:0000839!5.47e-32!70;CL:0002009!1.33e-31!65;CL:0000542!1.42e-31!53;CL:0000051!1.42e-31!53;CL:0000838!3.46e-31!52;CL:0002194!6.15e-31!63;CL:0000576!6.15e-31!63;CL:0000040!6.15e-31!63;CL:0000559!6.15e-31!63;CL:0000860!6.58e-31!45;CL:0000134!8.02e-19!358;CL:0002320!1.89e-17!365;CL:0000084!2.19e-15!25;CL:0000827!2.19e-15!25;CL:0000945!2.49e-14!24;CL:0000826!2.49e-14!24;CL:0000791!6.40e-13!18;CL:0000789!6.40e-13!18;CL:0002420!6.40e-13!18;CL:0002419!6.40e-13!18;CL:0000790!6.40e-13!18;CL:0000219!8.43e-13!390;CL:0000048!7.43e-10!430;CL:0000236!2.32e-09!14;CL:0000034!3.36e-09!444;CL:0000625!3.76e-09!11;CL:0000723!4.20e-09!436;CL:0000094!9.45e-09!8;CL:0002393!4.02e-08!9;CL:0002397!4.02e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.85e-33;33!CL:0002057;3.85e-33;33!CL:0000576;2.51e-30;48!CL:0000473;3.95e-27;39!CL:0000234;3.95e-27;39!CL:0002087;6.29e-26;104!CL:0000766;2.55e-24;69!CL:0000542;5.47e-21;53!CL:0000738;4.07e-20;136!CL:0000084;1.64e-17;25!CL:0000763;2.31e-17;100!CL:0000945;3.88e-17;24!CL:0000791;1.36e-16;18!CL:0000789;1.36e-16;18!CL:0002419;1.36e-16;18!CL:0000988;5.94e-16;177!CL:0000625;1.21e-11;11!CL:0000094;4.14e-11;8!CL:0000236;6.69e-10;13!CL:0000219;5.64e-09;193!CL:0002393;7.07e-08;6!CL:0002397;7.07e-08;6!CL:0000081;2.09e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.52e-104,168;CL:0000738,1.78e-102,136;CL:0002032,1.01e-96,161;CL:0000837,1.01e-96,161;CL:0000988,1.50e-96,177;CL:0002087,2.56e-87,115;CL:0002031,2.44e-82,120;CL:0000766,8.35e-54,72;CL:0000763,2.77e-53,108;CL:0000049,2.77e-53,108;CL:0000860,1.42e-45,42;CL:0002057,1.42e-45,42;CL:0000473,1.06e-44,48;CL:0000234,1.06e-44,48;CL:0000557,1.88e-44,67;CL:0002194,4.75e-43,59;CL:0000576,4.75e-43,59;CL:0000040,4.75e-43,59;CL:0000559,4.75e-43,59;CL:0002009,1.48e-42,61;CL:0000839,3.77e-42,66;CL:0000542,1.61e-37,53;CL:0000051,1.61e-37,53;CL:0000838,5.38e-37,52;CL:0000134,2.76e-28,354;CL:0002320,6.58e-27,361;CL:0000219,4.20e-22,386;CL:0000084,1.87e-17,25;CL:0000827,1.87e-17,25;CL:0000048,2.40e-17,427;CL:0000945,3.53e-17,24;CL:0000826,3.53e-17,24;CL:0000034,4.89e-17,441;CL:0000791,1.18e-16,18;CL:0000789,1.18e-16,18;CL:0002420,1.18e-16,18;CL:0002419,1.18e-16,18;CL:0000790,1.18e-16,18;CL:0000723,1.51e-16,433;CL:0000625,1.20e-11,11;CL:0000094,4.07e-11,8;CL:0000236,1.45e-10,14;CL:0002393,2.78e-10,9;CL:0002397,2.78e-10,9;CL:0000081,2.06e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-32;42!CL:0000051;5.47e-21;53!CL:0000790;1.36e-16;18!CL:0000049;1.54e-15;108 | |||
|ontology_enrichment_disease=DOID:2531!7.48e-17!51;DOID:0060083!7.48e-17!51;DOID:1240!9.51e-14!39;DOID:8692!3.37e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.05e-08;39!DOID:2531;4.66e-08;51!DOID:0060083;4.66e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.31e-12,51;DOID:0060083,5.31e-12,51;DOID:1240,5.35e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.06e-44!112;UBERON:0002390!1.81e-42!102;UBERON:0003061!1.81e-42!102;UBERON:0002405!1.01e-29!115;UBERON:0002371!1.27e-28!80;UBERON:0001474!8.78e-25!86;UBERON:0004765!4.43e-18!101;UBERON:0001434!4.43e-18!101;UBERON:0002384!2.71e-16!375;UBERON:0000178!6.97e-11!15;UBERON:0000179!6.97e-11!15;UBERON:0000463!6.97e-11!15;UBERON:0003081!7.17e-11!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.54e-10;15!UBERON:0000179;4.54e-10;15!UBERON:0000463;4.54e-10;15!UBERON:0002390;1.71e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-54,98;UBERON:0003061,1.02e-54,98;UBERON:0002193,1.64e-52,108;UBERON:0002405,1.02e-42,93;UBERON:0002371,1.33e-39,76;UBERON:0001474,4.04e-35,82;UBERON:0004765,4.15e-30,90;UBERON:0002384,4.88e-25,371;UBERON:0001434,5.03e-25,100;UBERON:0003081,3.05e-16,203;UBERON:0000178,4.33e-10,15;UBERON:0000179,4.33e-10,15;UBERON:0000463,4.33e-10,15;UBERON:0002204,3.17e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,2.70931945184821,3.38456359648821,18.4881210118985,18.8076405067634,10.8371286321253,0,0,0,6.27484324700443,4.69158467208491,3.22960483268332,12.1878989877013,16.6451891400218,13.0206522429511,4.03047853631864,2.59114932815184,2.83333124397605,7.85150489409649,4.91238726795452,9.94594650870046,18.1294648786434,7.40102198439286,15.7950249156503,11.507695692886,12.5518746199259,12.0605937243178,34.1298223929252,17.4280864567633,23.0225027210381,12.8004790888971,9.27880910196676,15.0564734578207,30.9144731294612,19.5766706516417,21.0981251513684,10.8850929061616,8.17800996248691,7.2458207590558,29.6013423401156,22.1280237629545,21.7987787148451,7.03496262718881,11.4726242052444,12.1625753034865,27.2429776185016,27.9891003350549,29.4310020320023,12.2528066060926,12.9688622978677,9.22498040236854,16.6246374096813,11.863974534479,9.80426078852189,9.12040779971995,6.96208370196815,6.21058122799755,8.79981222306614,7.09980194640771,5.33705552318133,3.84057200309856,5.60554381850417,9.19603903927173,5.94940385506376,5.72432252721218,10.2458334439701,8.22132065119314,9.93910393125595,3.96513985737078,3.92355994087075,1.84368859342554,5.31116379307349,3.14408610199332,3.90642848099067,4.34684888015763,6.8443675993054,12.3096429491031,9.74133642039557,4.2335973616366,9.42738903919479,6.20294904834139,7.85331204918545,2.94610035369053,2.9913649938772,4.60426132890293,5.25065033793112,6.37566788617116,6.07974908964448,8.29376567078111,16.7256838087963,3.28597093822942,5.74830740402882,7.21617635513523,7.59059076058509,4.77848121486145,9.11516835398986,9.50452044448374,6.77588035849977,9.34302261427254,12.4930726552346,10.8917535940248,9.03240796613151,15.5237192283044,13.6394499849589,6.66192257860875,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.132957960518865,6.67773748054957,6.29194401858141,5.57186251994347,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0.33472061276467,2.01414658554573,3.04108842287405,1.95249646038536,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0,79.068250461638,135.723092451914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,11.4780405847809,0,0,0,0,0,0,0,0,0,0,0,1.73239737313289,0.925971025153221,2.85381228351897,0,0,2.95460407304877,0,1.63494278517601,0,0,0,0,0,0,0,2.64145302039678,2.69526550203004,1.8735593944205,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01354254859276,2.10833939483032,0,0,0,0,0,0,4.70757604772815,21.8704143824139,15.5251853898852,14.6311061358913,0,0,0,0,0,39.6973722692007,29.9161459204025,55.1172632869927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.51132920165282,11.2171384425681,9.17856997109621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,2.04112446331819,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.633322905892992,0,0,0,0,0.670302275535787,0,0.941438007767792,0,0,0,0,15.7308758861972,10.7049208999933,11.3929437434833,12.388052323805,14.809041831103,13.6179395350471,12.9607544937148,7.9312517629427,0,0,0,2.22963810150862,3.02965347250534,5.26449640778264,7.174182272797,6.98527800014858,2.48956981172077,3.17510374085824,1.94773164164733,16.5670335086941,2.05411211129873,1.41011906195721,0,0.846458889008016,1.605880751037,2.62339619348362,0.425846237690326,1.03051603426729,2.15068535015921,3.57881772627865,1.50164227540718,5.47086667125713,0.556812347790485,1.23087398947712,0.811367035427949,3.66379164797602,1.4098700508785,0,0.146508179271894,0,3.23185814404687,0,0,0,0,0,0.422008249231538,0,0.494411622680279,0,0.796991953004279,3.31540698637377,0,0,4.67722260752064,0,0,0,2.04628948090749,0.295930216910801,11.974154617347,0,0.969332746095218,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,1.2558420511602,0.831058409500782,0,0.980312671588698,0.335643173951685,0.37950746544837,0.953619473882272,0,0,0,0,0.995261931078505,0.973033209536731,0.611030144933625,0.296521128680622,0.86494757262552,0.626531697032732,0.134802265961354,1.60515529459758,0.468528891450678,0.729819156862664,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,5.10986352267889,0,1.05154941711726,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,4.17550866228285,3.79112948553366,4.04421263125109,0,6.68919323319697,0,0.408610218334727,0,0,0,0.674921674654501,2.32140586367385,0.121499113316049,0,0,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,1.39557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| |||
|short_description=p1@LINC00528 | |||
}} |
Revision as of 10:56, 12 September 2013
Short description: | p1@LINC00528 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LINC00528_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_AK097861_5end |
EntrezGene: | LINC00528 |
HGNC: | 26875 |
UniProt: | Q8N1L1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-54 | 98 |
blood island | 1.02e-54 | 98 |
hemolymphoid system | 1.64e-52 | 108 |
immune system | 1.02e-42 | 93 |
bone marrow | 1.33e-39 | 76 |
bone element | 4.04e-35 | 82 |
skeletal element | 4.15e-30 | 90 |
connective tissue | 4.88e-25 | 371 |
skeletal system | 5.03e-25 | 100 |
lateral plate mesoderm | 3.05e-16 | 203 |
blood | 4.33e-10 | 15 |
haemolymphatic fluid | 4.33e-10 | 15 |
organism substance | 4.33e-10 | 15 |
musculoskeletal system | 3.17e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.31e-12 | 51 |
immune system cancer | 5.31e-12 | 51 |
leukemia | 5.35e-10 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.