FFCP PHASE1:Hg19::chr4:926069..926123,-: Difference between revisions
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{{FFCP | 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86,28.8327148566301,40.4822800947244,26.0841767552116,29.8588469645416,22.3307040228716,27.1307432142102,28.5489457094715,31.9876378221788,21.5641488598471,29.8231801092197,26.7452287035796,38.9788358297935,30.6533834297934,14.4009995278735,29.1886349405374,23.2357147248484,25.2369796457302,34.8641893037219,11.579845934246,37.3221837510253,16.5495325623959,31.2555340337176,23.7394603371274,33.6687021233196,12.3520578864389,28.9454945443893,21.2026975135057,17.5551774826532,23.8208841320832,24.5991857844429,35.2338948565823,29.1705557930287,43.8279242600986,60.0169751225316,69.3554466435755,61.3370228459416,17.0357121400135,12.288645437686,28.1045124066974,36.3977060455972,27.3130828017001,28.932116583017,33.4834412604433,47.3152292147231,27.9759015438889,26.1272449213849,21.3583600077098,23.1823344502866,23.7471572202404,24.5721685932031,17.1429855253565,26.784439932812,23.1759879164334,43.0156586839398,26.3943611042337,28.94226041546,28.0199761899914,16.9284452971528,17.4559922091324,42.4555177887597,35.4241440813962,41.185535636745,50.253509238985,35.794180863484,54.0118141745542,44.2443269031272,64.2462391166195,22.6721229737369,25.1275510730687,22.7451462166882,24.606966890022,29.3664213509719,37.9697959333055,17.1067951019996,23.9920947434131,27.4318893436787,43.7647846290532,35.357403754992,16.0496479159895,35.1897485196568,44.9124937712324,35.1485144376231,42.3707932827427,49.4009161410534,52.5095816657491,40.5710747474315,34.2385713088613,18.8182231464794,32.5794190480968,53.5701835878287,39.0089117773836,30.9552458160682,33.694004319992,30.4249129657851,27.7713910009428,15.9483848776799,38.7427477967941,48.0798974744427,23.8751558585616,16.5734788819183,27.786554869082,49.6485264134566,26.62585551481,67.5737453177027,13.3875106555545,32.9648664642065,40.0983412831042,19.2776606313926,26.3868035585644,17.0381106856528,46.4992591543547,29.2174791469882,33.6315399875081,77.4210821231783,66.685240617143,33.0146282038277,34.0853619036631,44.4556402700475,14.2046258497311,15.510319283216,22.9329345354584,22.7066526549518,50.6455205454654,27.1876972710461,60.2108818584742,14.6807813804433,31.3149896461314,34.4854805071989,28.5406145423769,22.4814375932346,38.4111893211546,34.5615011039218,15.5016128611055,22.4934636914344,56.0284387863678,38.6850422092004,23.0455475217146,32.8498751150233,40.7720426485813,35.3355240806901,38.021939241867,48.605408672091,30.586880643807,42.5747148448737,47.6343792124735,33.5802283907761,39.103312554639,28.584484608971,31.7755812089106,83.258348260103,58.7173482757812,38.9883666171948,25.0856783887164,59.1525964660958,38.8352114402936,45.4963082843244,26.4116462898393,23.5709570602023,21.6313281061895,25.7379506663561,17.1546947983002,11.1494680890065,28.148917008787,23.7823490686349,30.9685811432427,29.0820745579155,37.358898221592,69.4027097104502,38.9709636545626,42.5109612992389,44.779136199206,29.5199895015038,38.3012235327516,45.873213864639,13.4558235096736,30.0414587072938,46.082719082474,37.0118471424834,16.7694317531788,42.3644413461756,41.885767949323,40.5845634986136,16.3620569908059,14.8351010770025,61.7831303318208,33.7742759920767,25.81050366438,41.6843324663575,21.9723936290499,33.9535954834611,46.091698732345,39.7504930456009|short_description=p1@GAK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2580 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4113 | |||
|TSSclassifier=S | |||
|UniProt=O14976,Q6P490,D6RAW3,D6RF16,D6RAQ7 | |||
|association_with_transcript=0bp_to_ENST00000314167,ENST00000398567,ENST00000502656,ENST00000507580,ENST00000512325_5end | |||
|description=CAGE_peak_1_at_GAK_5end | |||
|id=chr4:926069..926123,- | |||
|ontology_enrichment_celltype=CL:0000766!2.34e-19!76;CL:0002057!4.17e-18!42;CL:0002009!2.54e-17!65;CL:0000557!7.06e-17!71;CL:0002194!1.73e-16!63;CL:0000576!1.73e-16!63;CL:0000040!1.73e-16!63;CL:0000559!1.73e-16!63;CL:0000738!5.18e-16!140;CL:0000860!1.34e-14!45;CL:0000839!2.78e-14!70;CL:0000763!1.33e-12!112;CL:0000049!1.33e-12!112;CL:0000988!2.97e-11!182;CL:0002087!3.12e-11!119;CL:0002031!1.71e-10!124;CL:0000037!2.67e-10!172;CL:0000566!2.67e-10!172;CL:0002032!1.16e-09!165;CL:0000837!1.16e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.99e-15;39!CL:0000234;3.99e-15;39!CL:0000860;7.06e-15;33!CL:0002057;7.06e-15;33!CL:0000576;3.87e-11;48!CL:0000766;1.10e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.29e-22,72;CL:0000473,5.36e-21,48;CL:0000234,5.36e-21,48;CL:0002009,1.09e-20,61;CL:0000557,5.47e-20,67;CL:0002194,8.16e-20,59;CL:0000576,8.16e-20,59;CL:0000040,8.16e-20,59;CL:0000559,8.16e-20,59;CL:0000860,4.17e-18,42;CL:0002057,4.17e-18,42;CL:0000738,5.83e-18,136;CL:0000839,4.36e-17,66;CL:0000763,1.64e-14,108;CL:0000049,1.64e-14,108;CL:0002087,6.09e-13,115;CL:0000988,2.32e-12,177;CL:0002031,4.34e-12,120;CL:0000037,1.29e-11,168;CL:0002032,5.93e-11,161;CL:0000837,5.93e-11,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.32e-20!112;UBERON:0002390!3.22e-20!102;UBERON:0003061!3.22e-20!102;UBERON:0007023!5.28e-16!115;UBERON:0003081!1.49e-14!216;UBERON:0002371!1.67e-14!80;UBERON:0002405!1.37e-12!115;UBERON:0001474!6.99e-12!86;UBERON:0001049!1.25e-09!57;UBERON:0005068!1.25e-09!57;UBERON:0006241!1.25e-09!57;UBERON:0007135!1.25e-09!57;UBERON:0002616!8.69e-08!59;UBERON:0004765!1.66e-07!101;UBERON:0001434!1.66e-07!101;UBERON:0002780!6.60e-07!41;UBERON:0001890!6.60e-07!41;UBERON:0006240!6.60e-07!41;UBERON:0003075!6.83e-07!86;UBERON:0007284!6.83e-07!86;UBERON:0000025!8.36e-07!194;UBERON:0000178!9.69e-07!15;UBERON:0000179!9.69e-07!15;UBERON:0000463!9.69e-07!15;UBERON:0003080!9.71e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@GAK | |||
}} |
Revision as of 12:20, 13 September 2013
Short description: | p1@GAK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GAK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000314167, ENST00000398567, ENST00000502656, ENST00000507580, ENST00000512325_5end |
EntrezGene: | GAK |
HGNC: | 4113 |
UniProt: | O14976Q6P490D6RAW3D6RF16D6RAQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.29e-22 | 72 |
defensive cell | 5.36e-21 | 48 |
phagocyte | 5.36e-21 | 48 |
macrophage dendritic cell progenitor | 1.09e-20 | 61 |
granulocyte monocyte progenitor cell | 5.47e-20 | 67 |
monopoietic cell | 8.16e-20 | 59 |
monocyte | 8.16e-20 | 59 |
monoblast | 8.16e-20 | 59 |
promonocyte | 8.16e-20 | 59 |
classical monocyte | 4.17e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.17e-18 | 42 |
leukocyte | 5.83e-18 | 136 |
myeloid lineage restricted progenitor cell | 4.36e-17 | 66 |
myeloid cell | 1.64e-14 | 108 |
common myeloid progenitor | 1.64e-14 | 108 |
nongranular leukocyte | 6.09e-13 | 115 |
hematopoietic cell | 2.32e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 4.34e-12 | 120 |
hematopoietic stem cell | 1.29e-11 | 168 |
hematopoietic oligopotent progenitor cell | 5.93e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.93e-11 | 161 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.11e-23 | 108 |
hematopoietic system | 5.63e-23 | 98 |
blood island | 5.63e-23 | 98 |
immune system | 7.79e-18 | 93 |
bone marrow | 4.28e-17 | 76 |
adult organism | 8.01e-16 | 114 |
lateral plate mesoderm | 2.93e-14 | 203 |
bone element | 4.78e-14 | 82 |
skeletal element | 8.13e-11 | 90 |
neural tube | 8.18e-10 | 56 |
neural rod | 8.18e-10 | 56 |
future spinal cord | 8.18e-10 | 56 |
neural keel | 8.18e-10 | 56 |
regional part of nervous system | 2.07e-09 | 53 |
regional part of brain | 2.07e-09 | 53 |
skeletal system | 2.79e-08 | 100 |
neural plate | 1.98e-07 | 82 |
presumptive neural plate | 1.98e-07 | 82 |
regional part of forebrain | 6.60e-07 | 41 |
forebrain | 6.60e-07 | 41 |
anterior neural tube | 6.60e-07 | 41 |
future forebrain | 6.60e-07 | 41 |
tube | 8.65e-07 | 192 |
blood | 9.69e-07 | 15 |
haemolymphatic fluid | 9.69e-07 | 15 |
organism substance | 9.69e-07 | 15 |
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