FFCP PHASE1:Hg19::chr5:96270617..96270650,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4012|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6656|TSSclassifier=N|UniProt=|association_with_transcript=-447bp_to_ENST00000395784_5end|description=CAGE_peak_6_at_LNPEP_5end|id=chr5:96270617..96270650,+|ontology_enrichment_celltype=CL:0000136!1.16e-08!15|ontology_enrichment_celltype_v019=CL:0000136;3.66e-18;13!CL:0002615;1.75e-08;3|ontology_enrichment_celltype_v019_2=CL:0000136,1.41e-15,15;CL:0002615,1.57e-08,3|ontology_enrichment_development_v019=UBERON:0006601;8.65e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.99e-24!115;UBERON:0001049!1.08e-16!57;UBERON:0005068!1.08e-16!57;UBERON:0006241!1.08e-16!57;UBERON:0007135!1.08e-16!57;UBERON:0001893!2.80e-16!34;UBERON:0003080!3.20e-16!42;UBERON:0002020!7.29e-16!34;UBERON:0003528!7.29e-16!34;UBERON:0002791!1.34e-15!33;UBERON:0002780!1.36e-15!41;UBERON:0001890!1.36e-15!41;UBERON:0006240!1.36e-15!41;UBERON:0001869!2.44e-15!32;UBERON:0002619!3.91e-14!22;UBERON:0000955!5.00e-14!69;UBERON:0006238!5.00e-14!69;UBERON:0001017!6.49e-14!82;UBERON:0002616!7.22e-14!59;UBERON:0001950!6.90e-13!20;UBERON:0005743!8.40e-13!86;UBERON:0000956!1.24e-12!25;UBERON:0000203!1.24e-12!25;UBERON:0000073!1.78e-11!94;UBERON:0001016!1.78e-11!94;UBERON:0003075!2.10e-11!86;UBERON:0007284!2.10e-11!86;UBERON:0000153!5.80e-11!129;UBERON:0007811!5.80e-11!129;UBERON:0000033!6.96e-10!123;UBERON:0002346!7.24e-10!90;UBERON:0003056!8.43e-10!61;UBERON:0004121!7.02e-09!169;UBERON:0000924!5.57e-08!173;UBERON:0006601!5.57e-08!173|ontology_enrichment_uberon_v019=UBERON:0001869;8.79e-34;32!UBERON:0001893;1.23e-33;34!UBERON:0002619;5.25e-33;22!UBERON:0002791;8.32e-32;32!UBERON:0001950;3.91e-29;20!UBERON:0000956;1.53e-28;25!UBERON:0000203;1.53e-28;25!UBERON:0003528;1.74e-27;34!UBERON:0002020;1.74e-27;34!UBERON:0002780;6.77e-27;41!UBERON:0001890;6.77e-27;41!UBERON:0000073;4.39e-21;53!UBERON:0002616;4.39e-21;53!UBERON:0001017;9.70e-15;75!UBERON:0000200;1.27e-13;6!UBERON:0000955;1.36e-13;68!UBERON:0000349;3.23e-12;5!UBERON:0002420;1.02e-11;9!UBERON:0007245;1.02e-11;9!UBERON:0010009;1.02e-11;9!UBERON:0010011;1.02e-11;9!UBERON:0000454;1.02e-11;9!UBERON:0001871;1.13e-11;6!UBERON:0007023;1.75e-10;114!UBERON:0001016;1.39e-09;83!UBERON:0001870;1.99e-08;3!UBERON:0002021;6.35e-08;5!UBERON:0009663;9.85e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0001893,3.77e-39,34;UBERON:0001869,1.23e-38,32;UBERON:0002780,1.35e-36,41;UBERON:0001890,1.35e-36,41;UBERON:0003080,1.35e-36,41;UBERON:0006240,1.35e-36,41;UBERON:0001049,1.09e-35,56;UBERON:0005068,1.09e-35,56;UBERON:0006241,1.09e-35,56;UBERON:0007135,1.09e-35,56;UBERON:0000073,1.29e-35,53;UBERON:0002616,1.29e-35,53;UBERON:0002791,3.04e-35,32;UBERON:0007023,9.34e-34,114;UBERON:0002619,2.54e-33,22;UBERON:0003528,8.22e-33,34;UBERON:0002020,8.22e-33,34;UBERON:0001950,1.69e-29,20;UBERON:0000955,2.60e-29,68;UBERON:0006238,2.60e-29,68;UBERON:0000956,8.11e-29,25;UBERON:0000203,8.11e-29,25;UBERON:0001017,3.17e-28,81;UBERON:0003075,2.14e-26,82;UBERON:0007284,2.14e-26,82;UBERON:0001016,5.46e-26,89;UBERON:0002346,1.05e-24,86;UBERON:0003056,7.00e-24,61;UBERON:0010371,9.20e-23,104;UBERON:0010314,2.36e-19,132;UBERON:0004121,2.20e-17,171;UBERON:0000924,2.20e-17,171;UBERON:0006601,2.20e-17,171;UBERON:0000200,3.99e-14,6;UBERON:0000349,3.26e-12,5;UBERON:0001871,4.71e-12,6;UBERON:0002420,6.89e-12,9;UBERON:0007245,6.89e-12,9;UBERON:0010009,6.89e-12,9;UBERON:0010011,6.89e-12,9;UBERON:0000454,6.89e-12,9;UBERON:0011216,1.70e-08,223;UBERON:0001870,2.48e-08,3;UBERON:0000025,7.04e-08,192;UBERON:0009663,7.19e-08,7;UBERON:0002021,8.06e-08,5|phase1_expression=0.54503513781167,1.71280419112787,2.67813367782345,3.00219895059391,4.91657203870017,0,2.53299878168311,0.631719873426831,6.7908263331958,0,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.587200878669695,0.553995408531877,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0,1.4555043671269,1.62700325833979,0,0,0.863077176966451,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0.188242339542605,0,0.674170453335254,0,0.641858054152187,0,1.9791078011203,0.797854630486527,0.852449501065388,0,0.56738522469114,0,0.75374599577023,0,0.217188844705117,0,0,0.316462387440884,0,0.850417199860174,0.838634582033504,0.112328631146495,0.150176892841506,0,0.855038231223746,0.59675003159727,0.365328307529268,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,0.526768169550154,0,0,0.205601498999509,0.501559486172034,0.651844533267181,0.473447805734733,0,0.557052284425868,0,0.443067789167242,0,0.384273959177026,0.130059347559878,0.328875809207352,0.276350017785848,0,0.296573126324121,0.535081656179426,0,0.906474741580529,1.1496614808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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6656 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-447bp_to_ENST00000395784_5end | |||
|description=CAGE_peak_6_at_LNPEP_5end | |||
|id=chr5:96270617..96270650,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.16e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.66e-18;13!CL:0002615;1.75e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.41e-15,15;CL:0002615,1.57e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.65e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p6@LNPEP | |||
}} |
Revision as of 17:01, 13 September 2013
Short description: | p6@LNPEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LNPEP_5end |
Coexpression cluster: | NA |
Association with transcript: | -447bp_to_ENST00000395784_5end |
EntrezGene: | LNPEP |
HGNC: | 6656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.41e-15 | 15 |
adipocyte of omentum tissue | 1.57e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.