FFCP PHASE1:Hg19::chr10:85974007..85974016,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_at_chr10:85974007..85974016,+ | |||
|id=chr10:85974007..85974016,+ | |||
|ontology_enrichment_celltype=CL:0000244!5.59e-07!4;CL:0000731!5.59e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.80e-07;4!CL:0000731;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.59e-07,4;CL:0000731,1.59e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.52e-28!41;UBERON:0001890!2.52e-28!41;UBERON:0006240!2.52e-28!41;UBERON:0003080!1.66e-27!42;UBERON:0001049!2.60e-26!57;UBERON:0005068!2.60e-26!57;UBERON:0006241!2.60e-26!57;UBERON:0007135!2.60e-26!57;UBERON:0002616!3.60e-25!59;UBERON:0000955!7.59e-24!69;UBERON:0006238!7.59e-24!69;UBERON:0003056!1.87e-22!61;UBERON:0001893!1.37e-20!34;UBERON:0000033!1.80e-20!123;UBERON:0000153!2.39e-20!129;UBERON:0007811!2.39e-20!129;UBERON:0001869!7.52e-20!32;UBERON:0003075!2.72e-19!86;UBERON:0007284!2.72e-19!86;UBERON:0005743!3.38e-19!86;UBERON:0002791!5.03e-19!33;UBERON:0001017!7.23e-19!82;UBERON:0002020!1.95e-18!34;UBERON:0003528!1.95e-18!34;UBERON:0002346!4.49e-18!90;UBERON:0000073!6.39e-18!94;UBERON:0001016!6.39e-18!94;UBERON:0000956!6.83e-13!25;UBERON:0000203!6.83e-13!25;UBERON:0004121!7.92e-13!169;UBERON:0002619!1.03e-12!22;UBERON:0000924!2.63e-12!173;UBERON:0006601!2.63e-12!173;UBERON:0001950!9.48e-12!20;UBERON:0007023!1.67e-11!115;UBERON:0001894!7.87e-10!7;UBERON:0006222!7.87e-10!7;UBERON:0000475!3.19e-08!365;UBERON:0003296!3.84e-07!4;UBERON:0010133!3.84e-07!4;UBERON:0000064!3.86e-07!219;UBERON:0002308!4.01e-07!9;UBERON:0000125!4.01e-07!9;UBERON:0000369!6.05e-07!4;UBERON:0002435!6.05e-07!4;UBERON:0000204!6.05e-07!4;UBERON:0010082!6.05e-07!4;UBERON:0001905!6.45e-07!2;UBERON:0002757!6.45e-07!2;UBERON:0010134!6.45e-07!2;UBERON:0002784!6.45e-07!2;UBERON:0005408!6.45e-07!2;UBERON:0001899!6.45e-07!2;UBERON:0000200!7.67e-07!6;UBERON:0000025!9.90e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.00e-50;2!UBERON:0002757;4.00e-50;2!UBERON:0010134;4.00e-50;2!UBERON:0005408;4.00e-50;2!UBERON:0001899;4.00e-50;2!UBERON:0001874;7.62e-26;1!UBERON:0003296;1.11e-25;4!UBERON:0010133;1.11e-25;4!UBERON:0002784;1.11e-25;4!UBERON:0001894;3.79e-15;7!UBERON:0001896;1.53e-09;3!UBERON:0005383;1.53e-09;3!UBERON:0005290;1.53e-09;3!UBERON:0005382;1.53e-09;3!UBERON:0000369;1.80e-07;4!UBERON:0002435;1.80e-07;4!UBERON:0000204;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.11e-50,2;UBERON:0002757,3.11e-50,2;UBERON:0010134,3.11e-50,2;UBERON:0005408,3.11e-50,2;UBERON:0001899,3.11e-50,2;UBERON:0003296,9.82e-26,4;UBERON:0010133,9.82e-26,4;UBERON:0002784,9.82e-26,4;UBERON:0001874,1.26e-25,1;UBERON:0001894,3.53e-15,7;UBERON:0006222,3.53e-15,7;UBERON:0001896,1.67e-09,3;UBERON:0005290,1.67e-09,3;UBERON:0010096,1.67e-09,3;UBERON:0005383,1.81e-09,3;UBERON:0005382,1.81e-09,3;UBERON:0000955,4.45e-09,68;UBERON:0006238,4.45e-09,68;UBERON:0000073,9.77e-08,53;UBERON:0002616,9.77e-08,53;UBERON:0001017,1.11e-07,81;UBERON:0000369,2.04e-07,4;UBERON:0002435,2.04e-07,4;UBERON:0000204,2.04e-07,4;UBERON:0010082,2.04e-07,4;UBERON:0001049,2.39e-07,56;UBERON:0005068,2.39e-07,56;UBERON:0006241,2.39e-07,56;UBERON:0007135,2.39e-07,56;UBERON:0001016,6.05e-07,89 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,5.19755703795225,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0.77380195455795,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.250381861413,1.14681839138014,0,0.0620964029413835,3.45871587340577,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0,0,0,0,2.67850917939143,1.68141861109412,0.606965604236632,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,1.09980912941201,0,0,0,0,0.500335809236594,0.316027223465453,0,0,0,0.828864656652147,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0,0.250707539292375,0,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:85974007..85974016,+ | |||
}} |
Revision as of 03:52, 11 January 2014
Short description: | p@chr10:85974007..85974016, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:85974007..85974016, + |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.59e-07 | 4 |
urothelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.11e-50 | 2 |
regional part of epithalamus | 3.11e-50 | 2 |
secretory circumventricular organ | 3.11e-50 | 2 |
circumventricular organ | 3.11e-50 | 2 |
epithalamus | 3.11e-50 | 2 |
gland of diencephalon | 9.82e-26 | 4 |
neuroendocrine gland | 9.82e-26 | 4 |
regional part of diencephalon | 9.82e-26 | 4 |
putamen | 1.26e-25 | 1 |
diencephalon | 3.53e-15 | 7 |
future diencephalon | 3.53e-15 | 7 |
medulla oblongata | 1.67e-09 | 3 |
myelencephalon | 1.67e-09 | 3 |
future myelencephalon | 1.67e-09 | 3 |
caudate-putamen | 1.81e-09 | 3 |
dorsal striatum | 1.81e-09 | 3 |
brain | 4.45e-09 | 68 |
future brain | 4.45e-09 | 68 |
regional part of nervous system | 9.77e-08 | 53 |
regional part of brain | 9.77e-08 | 53 |
central nervous system | 1.11e-07 | 81 |
corpus striatum | 2.04e-07 | 4 |
striatum | 2.04e-07 | 4 |
ventral part of telencephalon | 2.04e-07 | 4 |
future corpus striatum | 2.04e-07 | 4 |
neural tube | 2.39e-07 | 56 |
neural rod | 2.39e-07 | 56 |
future spinal cord | 2.39e-07 | 56 |
neural keel | 2.39e-07 | 56 |
nervous system | 6.05e-07 | 89 |