FFCP PHASE1:Hg19::chr12:49761147..49761166,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65244 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18650 | |||
|TSSclassifier=strong | |||
|UniProt=F8W1X1 | |||
|association_with_transcript=0bp_to_ENST00000549298_5end | |||
|description=CAGE_peak_3_at_SPATS2_5end | |||
|id=chr12:49761147..49761166,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.96e-29!246;CL:0002321!2.11e-28!248;CL:0000222!4.84e-23!119;CL:0000066!9.50e-20!254;CL:0000076!2.69e-17!62;CL:0000680!1.18e-15!57;CL:0000056!1.18e-15!57;CL:0000355!1.18e-15!57;CL:0000187!2.13e-15!54;CL:0000192!1.88e-13!42;CL:0000514!1.88e-13!42;CL:0000393!2.86e-13!60;CL:0000211!2.86e-13!60;CL:0000183!4.18e-13!59;CL:0000055!4.28e-13!180;CL:0000359!4.63e-13!32;CL:0002139!4.47e-10!24;CL:0000071!2.55e-09!18;CL:0002546!2.55e-09!18;CL:0000213!2.90e-09!57;CL:0000215!2.90e-09!57;CL:0002539!6.16e-07!10;CL:0002494!7.22e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.14e-12;32!CL:0002139;2.23e-10;24!CL:0000192;7.87e-10;43!CL:0000071;1.67e-09;18!CL:0000187;4.21e-09;55!CL:0000076;5.24e-09;63!CL:0000393;2.63e-07;61!CL:0000211;2.63e-07;61!CL:0002539;4.25e-07;10!CL:0002494;5.34e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.73e-28,250;CL:0000222,2.19e-23,121;CL:0000066,2.69e-19,253;CL:0000076,2.20e-16,63;CL:0000680,1.19e-15,58;CL:0000056,1.19e-15,58;CL:0000355,1.19e-15,58;CL:0000187,2.20e-15,55;CL:0000192,2.21e-13,43;CL:0000514,2.21e-13,43;CL:0000393,2.81e-13,61;CL:0000211,2.81e-13,61;CL:0000359,3.18e-13,32;CL:0002139,3.38e-10,24;CL:0000071,1.98e-09,18;CL:0002546,1.98e-09,18;CL:0000213,2.01e-09,58;CL:0000215,2.01e-09,58;CL:0002539,5.16e-07,10;CL:0002494,6.06e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;7.87e-10;43!CL:0002546;1.67e-09;18!CL:0000355;1.79e-08;58 | |||
|ontology_enrichment_disease=DOID:0050687!4.40e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.24e-22!69;UBERON:0002049!7.97e-22!79;UBERON:0007798!7.97e-22!79;UBERON:0001981!8.59e-20!60;UBERON:0007500!8.59e-20!60;UBERON:0004537!8.59e-20!60;UBERON:0006965!8.59e-20!60;UBERON:0000490!9.11e-20!138;UBERON:0004872!8.77e-19!84;UBERON:0000119!1.06e-18!312;UBERON:0001637!1.58e-18!42;UBERON:0003509!1.58e-18!42;UBERON:0004572!1.58e-18!42;UBERON:0000483!2.07e-18!309;UBERON:0000477!1.29e-16!286;UBERON:0000481!4.36e-16!347;UBERON:0004573!3.20e-15!33;UBERON:0004571!3.20e-15!33;UBERON:0004111!4.33e-15!241;UBERON:0000486!6.27e-15!82;UBERON:0003104!6.43e-15!238;UBERON:0009142!6.43e-15!238;UBERON:0004535!7.88e-14!110;UBERON:0003914!8.19e-14!118;UBERON:0001134!9.59e-14!61;UBERON:0002036!9.59e-14!61;UBERON:0003082!9.59e-14!61;UBERON:0002385!2.95e-13!63;UBERON:0001015!2.95e-13!63;UBERON:0000383!2.95e-13!63;UBERON:0000475!1.11e-12!365;UBERON:0001009!1.26e-12!113;UBERON:0000914!3.03e-12!83;UBERON:0002329!3.03e-12!83;UBERON:0003077!3.03e-12!83;UBERON:0003059!3.03e-12!83;UBERON:0007282!3.03e-12!83;UBERON:0009618!3.03e-12!83;UBERON:0007285!3.03e-12!83;UBERON:0004290!3.53e-12!70;UBERON:0000947!7.44e-11!21;UBERON:0010191!7.44e-11!21;UBERON:0000480!2.16e-10!626;UBERON:0005256!2.32e-10!143;UBERON:0000467!4.15e-10!625;UBERON:0002100!7.29e-10!216;UBERON:0001048!9.29e-10!168;UBERON:0000025!2.08e-09!194;UBERON:0001986!2.55e-09!18;UBERON:0004638!2.55e-09!18;UBERON:0004852!2.55e-09!18;UBERON:0002050!7.28e-09!605;UBERON:0005423!7.28e-09!605;UBERON:0000468!9.18e-09!659;UBERON:0000923!9.65e-09!604;UBERON:0005291!9.65e-09!604;UBERON:0006598!9.65e-09!604;UBERON:0002532!9.65e-09!604;UBERON:0000487!1.16e-08!22;UBERON:0004119!4.87e-08!169;UBERON:0000925!4.87e-08!169;UBERON:0006595!4.87e-08!169;UBERON:0000922!4.95e-08!612;UBERON:0006914!1.04e-07!25;UBERON:0001004!2.25e-07!72;UBERON:0004237!6.16e-07!10;UBERON:0004695!6.16e-07!10;UBERON:0002111!6.16e-07!10;UBERON:0004178!6.16e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.30e-14;42!UBERON:0003509;3.30e-14;42!UBERON:0004572;3.30e-14;42!UBERON:0004573;3.63e-14;33!UBERON:0004571;3.63e-14;33!UBERON:0007500;1.16e-11;56!UBERON:0001981;1.16e-11;56!UBERON:0004537;1.16e-11;56!UBERON:0000947;4.68e-11;21!UBERON:0010191;4.68e-11;21!UBERON:0000055;1.26e-10;65!UBERON:0002049;1.04e-09;75!UBERON:0007798;1.04e-09;75!UBERON:0004638;1.67e-09;18!UBERON:0001986;1.67e-09;18!UBERON:0004852;1.67e-09;18!UBERON:0000487;6.84e-09;22!UBERON:0000490;1.46e-08;33!UBERON:0006914;8.02e-08;25!UBERON:0004237;4.25e-07;10!UBERON:0004695;4.25e-07;10!UBERON:0002111;4.25e-07;10!UBERON:0004178;4.25e-07;10 | |||
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| |||
|short_description=p3@SPATS2 | |||
}} |
Revision as of 13:19, 11 January 2014
Short description: | p3@SPATS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPATS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549298_5end |
EntrezGene: | SPATS2 |
HGNC: | 18650 |
UniProt: | F8W1X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.73e-28 | 250 |
mesodermal cell | 2.19e-23 | 121 |
epithelial cell | 2.69e-19 | 253 |
squamous epithelial cell | 2.20e-16 | 63 |
muscle precursor cell | 1.19e-15 | 58 |
myoblast | 1.19e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.19e-15 | 58 |
muscle cell | 2.20e-15 | 55 |
smooth muscle cell | 2.21e-13 | 43 |
smooth muscle myoblast | 2.21e-13 | 43 |
electrically responsive cell | 2.81e-13 | 61 |
electrically active cell | 2.81e-13 | 61 |
vascular associated smooth muscle cell | 3.18e-13 | 32 |
endothelial cell of vascular tree | 3.38e-10 | 24 |
blood vessel endothelial cell | 1.98e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.98e-09 | 18 |
lining cell | 2.01e-09 | 58 |
barrier cell | 2.01e-09 | 58 |
aortic smooth muscle cell | 5.16e-07 | 10 |
cardiocyte | 6.06e-07 | 16 |