FFCP PHASE1:Hg19::chr1:228327943..228328044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4693 | |||
|TSSclassifier=strong | |||
|UniProt=Q16774,B1ANH5,B1ANH6,B1ANG9,B1ANH1,B1ANH3,B1ANH0 | |||
|association_with_transcript=0bp_to_ENST00000312726,ENST00000366721,ENST00000366722,ENST00000366723,ENST00000366726,ENST00000366728,ENST00000435153,ENST00000453943,ENST00000469973,ENST00000485083,ENST00000485838,ENST00000492871,ENST00000493138,ENST00000493209,ENST00000498092_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_GUK1_5end | |||
|id=chr1:228327943..228328044,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.99e-11!119;CL:0000183!3.13e-11!59;CL:0000192!3.59e-11!42;CL:0000514!3.59e-11!42;CL:0000680!4.45e-11!57;CL:0000056!4.45e-11!57;CL:0000355!4.45e-11!57;CL:0000359!2.12e-10!32;CL:0000187!2.36e-10!54;CL:0000393!4.29e-08!60;CL:0000211!4.29e-08!60;CL:0000220!7.38e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.64e-10;32!CL:0000192;2.76e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.24e-11,121;CL:0000192,3.53e-11,43;CL:0000514,3.53e-11,43;CL:0000680,4.09e-11,58;CL:0000056,4.09e-11,58;CL:0000355,4.09e-11,58;CL:0000359,2.12e-10,32;CL:0000187,2.16e-10,55;CL:0000393,3.78e-08,61;CL:0000211,3.78e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.76e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!2.94e-12!113;UBERON:0004535!4.65e-12!110;UBERON:0000025!1.07e-11!194;UBERON:0000483!1.08e-11!309;UBERON:0004872!2.69e-11!84;UBERON:0001981!3.14e-11!60;UBERON:0007500!3.14e-11!60;UBERON:0004537!3.14e-11!60;UBERON:0006965!3.14e-11!60;UBERON:0000486!3.48e-11!82;UBERON:0000055!3.54e-11!69;UBERON:0000119!7.87e-11!312;UBERON:0001637!1.23e-10!42;UBERON:0003509!1.23e-10!42;UBERON:0004572!1.23e-10!42;UBERON:0004290!6.71e-10!70;UBERON:0002049!6.89e-10!79;UBERON:0007798!6.89e-10!79;UBERON:0001134!7.67e-10!61;UBERON:0002036!7.67e-10!61;UBERON:0003082!7.67e-10!61;UBERON:0004111!2.72e-09!241;UBERON:0002385!3.14e-09!63;UBERON:0001015!3.14e-09!63;UBERON:0000383!3.14e-09!63;UBERON:0000477!4.25e-09!286;UBERON:0000914!4.28e-09!83;UBERON:0002329!4.28e-09!83;UBERON:0003077!4.28e-09!83;UBERON:0003059!4.28e-09!83;UBERON:0007282!4.28e-09!83;UBERON:0009618!4.28e-09!83;UBERON:0007285!4.28e-09!83;UBERON:0003914!1.32e-08!118;UBERON:0004573!8.37e-08!33;UBERON:0004571!8.37e-08!33;UBERON:0002050!5.93e-07!605;UBERON:0005423!5.93e-07!605;UBERON:0000923!7.53e-07!604;UBERON:0005291!7.53e-07!604;UBERON:0006598!7.53e-07!604;UBERON:0002532!7.53e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.77e-07;42!UBERON:0003509;1.77e-07;42!UBERON:0004572;1.77e-07;42!UBERON:0004573;6.48e-07;33!UBERON:0004571;6.48e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.97e-12,306;UBERON:0001009,5.15e-12,112;UBERON:0004535,8.12e-12,109;UBERON:0000119,1.56e-11,309;UBERON:0000025,1.61e-11,192;UBERON:0007503,2.10e-11,78;UBERON:0000486,3.05e-11,83;UBERON:0004872,4.77e-11,83;UBERON:0007500,5.72e-11,59;UBERON:0001981,5.72e-11,59;UBERON:0004537,5.72e-11,59;UBERON:0006965,5.72e-11,59;UBERON:0000055,6.37e-11,68;UBERON:0001637,1.23e-10,42;UBERON:0003509,1.23e-10,42;UBERON:0004572,1.23e-10,42;UBERON:0007524,3.20e-10,73;UBERON:0003077,3.52e-10,72;UBERON:0007285,3.52e-10,72;UBERON:0002329,5.92e-10,71;UBERON:0003059,5.92e-10,71;UBERON:0007282,5.92e-10,71;UBERON:0004290,5.92e-10,71;UBERON:0009618,5.92e-10,71;UBERON:0001134,6.87e-10,62;UBERON:0002036,6.87e-10,62;UBERON:0003082,6.87e-10,62;UBERON:0002049,1.20e-09,78;UBERON:0007798,1.20e-09,78;UBERON:0002385,2.78e-09,64;UBERON:0001015,2.78e-09,64;UBERON:0000383,2.78e-09,64;UBERON:0004111,3.40e-09,240;UBERON:0003914,1.55e-08,117;UBERON:0005423,2.97e-08,581;UBERON:0002050,3.08e-08,564;UBERON:0004573,8.37e-08,33;UBERON:0004571,8.37e-08,33;UBERON:0000923,1.01e-07,560;UBERON:0010316,1.01e-07,560;UBERON:0005291,1.01e-07,560;UBERON:0006598,1.01e-07,560;UBERON:0010317,1.01e-07,560;UBERON:0002532,1.01e-07,560;UBERON:0010371,4.99e-07,104;UBERON:0000490,9.74e-07,148 | |||
|phase1_expression=253.804695840968,225.233751133314,154.345072485088,284.20816732289,170.292176976797,362.020487501653,341.954835527219,149.085890128732,172.121328983694,166.853342884525,596.619998616426,159.243760282896,226.83960127647,102.107241192038,159.402137725127,128.414102972289,138.619741445515,154.825739162123,175.655807564583,99.9742991583518,172.584584792638,193.715017873458,94.7441117403798,89.789622847812,103.572677665712,77.2539532111787,70.9349092847531,66.0383455221769,130.990304190685,89.0484203585533,118.898782706746,409.142444893123,403.917137081633,238.491336557578,59.6497444468323,68.2412315939623,62.8304940176573,120.217003651417,97.2640570230187,133.678696360965,80.6095707263728,65.4265205358339,60.2726828263997,83.7493855370293,82.3769557241605,62.3441037252688,89.7176082455943,82.644745492387,91.9827921558458,123.995421090847,111.686068046688,119.660008323624,98.5972646906729,83.2675241823136,74.484567626888,93.7446850922171,88.421592618742,101.125568000288,127.330899226295,85.3671212022409,91.4252089892629,95.9867283543344,76.394580869085,73.7368818421561,99.5417688496043,87.3773246024355,76.6071366264557,107.785677395143,96.4743399077373,98.603735496123,92.0207244002721,59.6609770299855,103.166738305728,116.612918044192,105.239128482697,123.488942204433,85.5944169336293,89.3552512406963,57.2183088641605,151.056754182862,106.619338978712,117.270386716895,72.1584602291423,72.6364352978635,76.4977958322657,66.5699147203751,59.2586060813298,77.0168269539007,75.3591154974743,78.2324078718999,55.2136580036165,79.2770205650767,72.2496401156683,60.7988111463519,94.7259471438796,58.9980349896173,94.8141091948675,125.763444079733,114.931237940726,107.333730040815,115.376482388291,113.154025570601,107.154700624351,100.046590282886,132.572658363677,115.64069297265,82.0535707207997,122.455301657745,128.23851669404,121.026297788306,137.069608821781,76.5080146340539,79.7781709811885,75.9815951774785,72.129511425434,102.4316457986,132.594290786265,146.728919221083,73.3757106856558,104.808021312628,135.425358402135,165.378655734017,66.5542026323756,69.2407566345403,82.4542795245483,102.524550135059,131.380479507367,143.947214662459,165.278040994208,151.486326461408,214.550042356286,118.714052167544,208.543838366798,131.563851467982,170.956227526838,148.902221491727,116.907034216512,285.168033997345,83.8523828245282,115.964474872921,106.719264617148,96.7280472550608,262.656902858923,334.447567391555,146.695421931917,121.020167422991,153.566444399289,288.096674160853,263.689653869639,302.737863583595,146.686656636628,223.660994727592,133.301952617316,215.382325873048,168.219273920172,134.257604466753,158.627179601439,134.118298008882,87.162734358244,59.2455484593466,184.09299791888,329.958093881834,251.383919274615,82.7241930778205,211.447048397139,72.0648807252524,131.574212358936,137.61122915062,185.513131333719,141.440583275651,209.399593312456,227.980122164389,213.279145281579,245.957045408389,184.376594078963,148.664220694217,57.8628120153766,40.7308001463316,157.827430078269,174.9314112444,168.663413252934,276.760989324053,83.0933464517376,99.5511866594995,118.836803563484,83.5493000600021,118.69224044288,82.2468225736626,151.085477185875,159.732110032446,201.307372703276,77.1544656089535,69.2816201895603,66.714133183568,77.3744309056045,99.7414656571556,76.4610780700664,103.356248583539,115.226389043808,105.578717984811,365.776634184465,80.2963263560896,60.3071265782867,43.4990661310167,100.964852802593,174.391555809642,123.495684421223,177.521366645433,29.0611209815956,64.9214462008445,93.8858322136859,39.3119335870567,72.1367704669072,30.4015837253842,124.512176885834,50.2953470078973,133.196386055359,29.0298840380732,84.4097570549885,73.064017682103,37.6310168067611,119.592740596209,110.892627371059,235.391719152896,151.919589169095,185.562573216685,34.7625062469347,32.2047337021209,49.4986196624148,59.5014455788226,62.5755710171558,55.841535938602,204.948887352059,206.480341159916,281.79523955906,128.165548136826,280.811118369469,184.795221662236,167.741766627711,167.984687828787,182.977700763042,183.672371369898,161.344020995546,230.561536953881,194.455471939218,204.68548749548,115.152250921445,270.66662344065,223.073114141619,385.16282383012,144.500739696887,67.8150779507562,109.29613273606,130.673077426737,31.9769940212095,113.406322607325,155.296653853205,292.244558469811,213.221950485069,86.014665552274,96.7650666771664,235.025261473185,124.124954141735,98.4249138238402,105.198190035296,138.158690507348,206.954524121745,144.40290154606,102.726571734706,85.8486162094873,127.540409153272,101.791855335568,135.105726520454,356.188569149753,125.482649764548,138.797820200296,93.2304221336651,98.8155390947471,200.892523882571,29.0671310358607,46.4895731589834,58.6738566980385,64.8539790376326,61.2275802117943,111.565800271341,165.782976692293,192.236613424477,251.476495653377,91.207986027848,136.656091318982,80.8888804344536,49.4498081963041,69.7536110133248,60.0640560873581,88.2925818625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| |||
|short_description=p1@GUK1 | |||
}} |
Revision as of 00:33, 11 January 2014
Short description: | p1@GUK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GUK1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000312726, ENST00000366721, ENST00000366722, ENST00000366723, ENST00000366726, ENST00000366728, ENST00000435153, ENST00000453943, ENST00000469973, ENST00000485083, ENST00000485838, ENST00000492871, ENST00000493138, ENST00000493209, ENST00000498092_5end |
EntrezGene: | GUK1 |
HGNC: | 4693 |
UniProt: | Q16774B1ANH5B1ANH6B1ANG9B1ANH1B1ANH3B1ANH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.24e-11 | 121 |
smooth muscle cell | 3.53e-11 | 43 |
smooth muscle myoblast | 3.53e-11 | 43 |
muscle precursor cell | 4.09e-11 | 58 |
myoblast | 4.09e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.09e-11 | 58 |
vascular associated smooth muscle cell | 2.12e-10 | 32 |
muscle cell | 2.16e-10 | 55 |
electrically responsive cell | 3.78e-08 | 61 |
electrically active cell | 3.78e-08 | 61 |