FFCP PHASE1:Hg19::chr1:52607569..52607590,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9372 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6775 | |||
|TSSclassifier=strong | |||
|UniProt=O95405 | |||
|association_with_transcript=-455bp_to_ENST00000287727,ENST00000357206,ENST00000361625,NM_004799,NM_007323,NM_007324,uc001ctn.2,uc001cto.2,uc001ctp.2_5end | |||
|description=CAGE_peak_2_at_ZFYVE9_5end | |||
|id=chr1:52607569..52607590,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.68e-10;82 | |||
|ontology_enrichment_disease=DOID:0050687!7.06e-08!143;DOID:3095!9.90e-07!22;DOID:2994!9.90e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.08e-07;22!DOID:2994;2.08e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.14e-07,22;DOID:2994,2.14e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.19e-24!94;UBERON:0001016!2.19e-24!94;UBERON:0001017!2.94e-24!82;UBERON:0005743!2.57e-23!86;UBERON:0001049!2.17e-22!57;UBERON:0005068!2.17e-22!57;UBERON:0006241!2.17e-22!57;UBERON:0007135!2.17e-22!57;UBERON:0000924!4.22e-22!173;UBERON:0006601!4.22e-22!173;UBERON:0000955!5.48e-21!69;UBERON:0006238!5.48e-21!69;UBERON:0004121!3.20e-20!169;UBERON:0007023!3.51e-20!115;UBERON:0002346!6.96e-20!90;UBERON:0002780!1.74e-19!41;UBERON:0001890!1.74e-19!41;UBERON:0006240!1.74e-19!41;UBERON:0003080!1.78e-19!42;UBERON:0002616!3.66e-18!59;UBERON:0002020!5.11e-18!34;UBERON:0003528!5.11e-18!34;UBERON:0001893!5.26e-18!34;UBERON:0003075!8.22e-18!86;UBERON:0007284!8.22e-18!86;UBERON:0002791!2.34e-17!33;UBERON:0001869!2.66e-17!32;UBERON:0000033!2.12e-15!123;UBERON:0000153!9.01e-15!129;UBERON:0007811!9.01e-15!129;UBERON:0003056!1.79e-13!61;UBERON:0002619!2.28e-13!22;UBERON:0000956!8.43e-13!25;UBERON:0000203!8.43e-13!25;UBERON:0001950!8.59e-13!20;UBERON:0000475!4.32e-12!365;UBERON:0000477!5.05e-10!286;UBERON:0000468!1.13e-09!659;UBERON:0004111!2.25e-09!241;UBERON:0000064!2.53e-09!219;UBERON:0000922!3.86e-09!612;UBERON:0000483!6.87e-09!309;UBERON:0000119!8.48e-09!312;UBERON:0000481!3.18e-08!347;UBERON:0002050!8.34e-08!605;UBERON:0005423!8.34e-08!605;UBERON:0000923!1.32e-07!604;UBERON:0005291!1.32e-07!604;UBERON:0006598!1.32e-07!604;UBERON:0002532!1.32e-07!604;UBERON:0000062!2.89e-07!511;UBERON:0000467!3.75e-07!625;UBERON:0000480!5.60e-07!626;UBERON:0000025!6.11e-07!194;UBERON:0002308!9.18e-07!9;UBERON:0000125!9.18e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.49e-21;32!UBERON:0002791;1.75e-20;32!UBERON:0001893;2.23e-20;34!UBERON:0003528;6.57e-20;34!UBERON:0002020;6.57e-20;34!UBERON:0001950;3.08e-18;20!UBERON:0002619;4.44e-18;22!UBERON:0002780;5.08e-18;41!UBERON:0001890;5.08e-18;41!UBERON:0000073;1.37e-15;53!UBERON:0002616;1.37e-15;53!UBERON:0000956;3.99e-15;25!UBERON:0000203;3.99e-15;25!UBERON:0001017;3.55e-13;75!UBERON:0001016;4.15e-13;83!UBERON:0000955;4.33e-11;68!UBERON:0000125;1.98e-10;9!UBERON:0002308;1.98e-10;9!UBERON:0009663;7.41e-09;7!UBERON:0000922;8.92e-09;49!UBERON:0002420;1.62e-08;9!UBERON:0007245;1.62e-08;9!UBERON:0010009;1.62e-08;9!UBERON:0010011;1.62e-08;9!UBERON:0000454;1.62e-08;9!UBERON:0003135;2.55e-07;11!UBERON:0001872;3.13e-07;5!UBERON:0007023;4.33e-07;114!UBERON:0000473;4.49e-07;8!UBERON:0002298;7.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.49e-33,89;UBERON:0001017,1.83e-32,81;UBERON:0001049,6.62e-31,56;UBERON:0005068,6.62e-31,56;UBERON:0006241,6.62e-31,56;UBERON:0007135,6.62e-31,56;UBERON:0000073,3.45e-28,53;UBERON:0002616,3.45e-28,53;UBERON:0000955,1.45e-26,68;UBERON:0006238,1.45e-26,68;UBERON:0002780,8.55e-24,41;UBERON:0001890,8.55e-24,41;UBERON:0003080,8.55e-24,41;UBERON:0006240,8.55e-24,41;UBERON:0002346,1.16e-23,86;UBERON:0003528,1.35e-23,34;UBERON:0002020,1.35e-23,34;UBERON:0001893,1.41e-23,34;UBERON:0004121,3.58e-23,171;UBERON:0000924,3.58e-23,171;UBERON:0006601,3.58e-23,171;UBERON:0001869,2.52e-22,32;UBERON:0002791,1.04e-21,32;UBERON:0007023,4.53e-21,114;UBERON:0003075,1.86e-20,82;UBERON:0007284,1.86e-20,82;UBERON:0010371,4.19e-20,104;UBERON:0001950,4.97e-18,20;UBERON:0002619,7.24e-18,22;UBERON:0003056,2.44e-15,61;UBERON:0000956,6.01e-15,25;UBERON:0000203,6.01e-15,25;UBERON:0011216,1.15e-14,223;UBERON:0010314,2.73e-14,132;UBERON:0000125,1.24e-10,9;UBERON:0002308,1.24e-10,9;UBERON:0009663,9.96e-09,7;UBERON:0002420,1.71e-08,9;UBERON:0007245,1.71e-08,9;UBERON:0010009,1.71e-08,9;UBERON:0010011,1.71e-08,9;UBERON:0000454,1.71e-08,9;UBERON:0003076,3.03e-08,15;UBERON:0003057,3.03e-08,15;UBERON:0003135,7.69e-08,11;UBERON:0000922,1.67e-07,592;UBERON:0002298,1.91e-07,6;UBERON:0000473,1.98e-07,8;UBERON:0001872,3.99e-07,5 | |||
|phase1_expression=1.45342703416445,0.642301571672949,1.9733616573436,0,0.446961094427288,1.74467704820074,0,1.26343974685366,0.522371256399677,0.245733936501509,0.697801167972428,0,0,0.37129905888014,0.662794751455832,0,1.20538905604795,0,0,0.369363174230364,0,0,0.572471974262113,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0.919421224478927,1.50602959389125,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.535081656179426,0,0,0,0,0.253019692019503,0.637130828648193,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.895037932904712,0.722878304769133,1.50401373190767,0.434539556882471,0,0,0.283604451492204,0.886917589850256,0.702678285545008,2.22664428346111,0,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,0.402829317109147,0,1.70843440283719,0.735326160691737,0,0.714397826272638,1.12264686313085,0.337834441449967,0,0,0.549605231791222,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0.529636723252875,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.269421344139376,0.490385709340376,0.151357427644931,0,0.234321431833797,0.936480230490962,0,0.298897361103602,1.17434498643765,1.61872944368132,0.98315564691574,0,0.61417158655884,0.826606249406124,1.18800285728205,0.989067717114227,0,0.718618141816238,0.336672227908132,0.500474079487857,0,0.438977620880838,0.30648779579902,0.600952235626387,0.340296549480063,0,0.85422955527427,1.27159140695737,0,0.206105058476878,0.257640540045629,0.744467425326359,0.337552664482532,0.584622030967192,0,0.644349290496095,0.161646056818812,0,0.302256294682921,0.169560592310488,0.386521706326594,0.272746120590835,1.14721838155602,0.609868530647977,0.927708378250397,1.62671520017326,1.0366105501537,1.26160425437814,0.72995471815166,0,0,0,0.464367928031979,0,1.0647612003586,1.18009283054671,1.20505514941741,0.772057809126758,0.435758888184812,0,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.614942192715568,0.171567810298526,2.08525542276389,0,1.91005047582099,1.66659201285353,0,0,0,0.34779121492523,0.70445216541493,0.433099343283221,2.31492756288305,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.141775097242386,1.16426079513703,2.03443756959773,0,0,0,0,0,0.25248486685276,0.126995788584338,0.381988425558278,0,0,0.308482478109971,0,0.857479297891735,0.112131084345361,0.43596006883328,0.36669142910475,0.387815147273333,0,0,1.06375246633948,0,0,1.41849132023278,0.799266537048298,0.428933980974443,0,0,0,1.42156779497018,0,0.904318131178758,1.74306691720059,0.699810938274399,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0.128343036279748,1.77866236955724,0,0.773288812777695,2.01019518401218,0,0,0,0,0.981531933753119,0.500170521059677,0.542530047399471,1.03985430765404,0.535286966391485,1.73472656537328,1.28855556491985,0.902838299183157,0,1.03473071292505,0.664225598535437,0.737476674166813,0.173767228936166,0,0.343143423810856,0,0.215714200818617,0,1.21251028578504,0,0,0.496215615637554,0.61384789315225,0.561320188866147,1.53766979106841,1.53512174720011,1.44768529029247,1.48418066444991,0.308419387605311,0.532685175939381,0.574890092096664,0,0.464841513839837,0.120859449591622,1.20303882181971,1.56537681191024,0.68888668898764,0.546273504020151,0.655622074797121,0.902399225814824,0.924184045252977,0,0,0.422206515571503,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.721287081534056,0.824125183365091,0.742585499285292,2.87132768998086,0,1.6068392984416,0.773365746336976,1.23238893691716,0.767518373630648,0.964856007391714,0.322260734604821,0.725083469571143,1.02271952899321,0.801288320820636,0.826424576804891,0.768760269460425,2.16941611240793,1.4162089319777,0,0,0,0.308033580176089,0,0,0,0.858749320451947,0,0.632758849437452,0.38126038784765,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.353437207037059,0.404364963146632,0,0.842516912477962,0.48763373908959,0.487426979262569,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.430234056612155,0.785992328104969,0.35667105148125,0,0.422215270595328,0.658589785919804,0.379473173765715,0,1.53955380360819,1.34060455107157,0,0.564862804660675,0,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0.557409525377156,0,0.711418433484141,1.4348364545594,0.798317485731266,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,1.89318974933188,0,0,0.561421621224659,0.586032717087576,1.94176834799221,0,0,0.95497793895076,0.296964680832639,0.921482106297696,0.994147647766298,2.95405774462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| |||
|short_description=p2@ZFYVE9 | |||
}} |
Revision as of 18:32, 10 January 2014
Short description: | p2@ZFYVE9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZFYVE9_5end |
Coexpression cluster: | NA |
Association with transcript: | -455bp_to_ENST00000287727, ENST00000357206, ENST00000361625, NM_004799, NM_007323, NM_007324, uc001ctn.2, uc001cto.2, uc001ctp.2_5end |
EntrezGene: | ZFYVE9 |
HGNC: | 6775 |
UniProt: | O95405 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.14e-07 | 22 |
germ cell cancer | 2.14e-07 | 22 |