FFCP PHASE1:Mm9::chr10:111706991..111707011,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=189|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:111706991..111707011,+|id=chr10:111706991..111707011,+|ontology_enrichment_celltype=CL:0000540!4.14e-11!33;CL:0000047!4.14e-11!33;CL:0000031!4.14e-11!33;CL:0000404!4.14e-11!33;CL:0000117!9.08e-11!23;CL:0000337!9.08e-11!23;CL:0000221!2.02e-08!44;CL:0000133!2.02e-08!44;CL:0000393!4.05e-08!39;CL:0000211!4.05e-08!39;CL:0002319!5.71e-08!43|ontology_enrichment_celltype_v019_2=CL:0002610,5.65e-13,3;CL:0002614,3.29e-12,3;CL:0000117,4.15e-12,23;CL:0000337,4.15e-12,23;CL:0000540,5.23e-08,33;CL:0000047,5.23e-08,33;CL:0000031,5.23e-08,33;CL:0000404,5.23e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.69e-20!73;UBERON:0005743!5.69e-20!73;UBERON:0000073!9.22e-20!75;UBERON:0001016!9.22e-20!75;UBERON:0000033!2.12e-18!63;UBERON:0004121!2.00e-17!102;UBERON:0000924!2.00e-17!102;UBERON:0006601!2.00e-17!102;UBERON:0002346!1.96e-16!71;UBERON:0003075!1.96e-16!71;UBERON:0007284!1.96e-16!71;UBERON:0003056!7.56e-16!49;UBERON:0001049!8.39e-16!52;UBERON:0005068!8.39e-16!52;UBERON:0006241!8.39e-16!52;UBERON:0007135!8.39e-16!52;UBERON:0002020!1.70e-15!34;UBERON:0000955!4.87e-15!50;UBERON:0006238!4.87e-15!50;UBERON:0002616!3.13e-14!49;UBERON:0003080!2.20e-12!40;UBERON:0002791!6.14e-12!29;UBERON:0003528!6.14e-12!29;UBERON:0001893!6.14e-12!29;UBERON:0002780!1.45e-11!39;UBERON:0001890!1.45e-11!39;UBERON:0006240!1.45e-11!39;UBERON:0007811!5.58e-10!86;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0002420!4.22e-08!8;UBERON:0007245!4.22e-08!8;UBERON:0010009!4.22e-08!8;UBERON:0010011!4.22e-08!8;UBERON:0000454!4.22e-08!8;UBERON:0000153!6.21e-08!94;UBERON:0002298!3.32e-07!6;UBERON:0000489!5.33e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.67e-22,54;UBERON:0001017,1.70e-19,73;UBERON:0001016,7.02e-19,75;UBERON:0000955,1.14e-17,47;UBERON:0006238,1.14e-17,47;UBERON:0002950,6.15e-16,4;UBERON:0001891,6.15e-16,4;UBERON:0009616,6.15e-16,4;UBERON:0010286,6.15e-16,4;UBERON:0002616,1.03e-15,46;UBERON:0004121,1.06e-15,95;UBERON:0000924,1.06e-15,95;UBERON:0006601,1.06e-15,95;UBERON:0001049,1.46e-15,52;UBERON:0005068,1.46e-15,52;UBERON:0006241,1.46e-15,52;UBERON:0007135,1.46e-15,52;UBERON:0002346,9.20e-14,64;UBERON:0003075,9.20e-14,64;UBERON:0007284,9.20e-14,64;UBERON:0003080,1.33e-13,40;UBERON:0004684,5.65e-13,3;UBERON:0002275,5.65e-13,3;UBERON:0003056,2.01e-12,49;UBERON:0002038,3.29e-12,3;UBERON:0009663,3.29e-12,3;UBERON:0009661,3.29e-12,3;UBERON:0000125,3.29e-12,3;UBERON:0002308,3.29e-12,3;UBERON:0002420,9.83e-12,8;UBERON:0007245,9.83e-12,8;UBERON:0010009,9.83e-12,8;UBERON:0010011,9.83e-12,8;UBERON:0000454,9.83e-12,8;UBERON:0002780,1.00e-11,39;UBERON:0001890,1.00e-11,39;UBERON:0006240,1.00e-11,39;UBERON:0010371,1.12e-11,73;UBERON:0002020,3.56e-11,34;UBERON:0003528,4.29e-11,29;UBERON:0002791,4.29e-11,29;UBERON:0001893,4.29e-11,29;UBERON:0010314,1.30e-08,92;UBERON:0001896,1.78e-08,2;UBERON:0002298,1.78e-08,2;UBERON:0005290,1.78e-08,2;UBERON:0010096,1.78e-08,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0,7.70811166995721,19.5361627270337,17.664751324468,1.05509030184155,0.640413505216868,0.52091337055676,3.35019598801657,1.68828783009504,3.0559649555362,0.883885756421003,0.427115042397309,1.1183966749518,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98743836428936,5.03250663100489,0.628271760564322,1.39059456153821,1.27857728665165,12.0517065844545,8.76102820565891,0.611036183101898,0,0.505445516867349,0,0,0.689706313300419,0.540186389416048,0.452114453507145,0.884474488967262,0.512454881139399,1.03071897015702,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,1.68231958851302,0,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.49095073923223,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.64096361229084,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,1.92792789853084,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0.117357238645754,0.5208175393758,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,1.03552062350364,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0,0,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0|short_description=p@chr10:111706991..111707011,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:111706991..111707011,+ | |||
|description=CAGE_peak_at_chr10:111706991..111707011,+ | |||
|id=chr10:111706991..111707011,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.14e-11!33;CL:0000047!4.14e-11!33;CL:0000031!4.14e-11!33;CL:0000404!4.14e-11!33;CL:0000117!9.08e-11!23;CL:0000337!9.08e-11!23;CL:0000221!2.02e-08!44;CL:0000133!2.02e-08!44;CL:0000393!4.05e-08!39;CL:0000211!4.05e-08!39;CL:0002319!5.71e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.65e-13,3;CL:0002614,3.29e-12,3;CL:0000117,4.15e-12,23;CL:0000337,4.15e-12,23;CL:0000540,5.23e-08,33;CL:0000047,5.23e-08,33;CL:0000031,5.23e-08,33;CL:0000404,5.23e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.69e-20!73;UBERON:0005743!5.69e-20!73;UBERON:0000073!9.22e-20!75;UBERON:0001016!9.22e-20!75;UBERON:0000033!2.12e-18!63;UBERON:0004121!2.00e-17!102;UBERON:0000924!2.00e-17!102;UBERON:0006601!2.00e-17!102;UBERON:0002346!1.96e-16!71;UBERON:0003075!1.96e-16!71;UBERON:0007284!1.96e-16!71;UBERON:0003056!7.56e-16!49;UBERON:0001049!8.39e-16!52;UBERON:0005068!8.39e-16!52;UBERON:0006241!8.39e-16!52;UBERON:0007135!8.39e-16!52;UBERON:0002020!1.70e-15!34;UBERON:0000955!4.87e-15!50;UBERON:0006238!4.87e-15!50;UBERON:0002616!3.13e-14!49;UBERON:0003080!2.20e-12!40;UBERON:0002791!6.14e-12!29;UBERON:0003528!6.14e-12!29;UBERON:0001893!6.14e-12!29;UBERON:0002780!1.45e-11!39;UBERON:0001890!1.45e-11!39;UBERON:0006240!1.45e-11!39;UBERON:0007811!5.58e-10!86;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0002420!4.22e-08!8;UBERON:0007245!4.22e-08!8;UBERON:0010009!4.22e-08!8;UBERON:0010011!4.22e-08!8;UBERON:0000454!4.22e-08!8;UBERON:0000153!6.21e-08!94;UBERON:0002298!3.32e-07!6;UBERON:0000489!5.33e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.67e-22,54;UBERON:0001017,1.70e-19,73;UBERON:0001016,7.02e-19,75;UBERON:0000955,1.14e-17,47;UBERON:0006238,1.14e-17,47;UBERON:0002950,6.15e-16,4;UBERON:0001891,6.15e-16,4;UBERON:0009616,6.15e-16,4;UBERON:0010286,6.15e-16,4;UBERON:0002616,1.03e-15,46;UBERON:0004121,1.06e-15,95;UBERON:0000924,1.06e-15,95;UBERON:0006601,1.06e-15,95;UBERON:0001049,1.46e-15,52;UBERON:0005068,1.46e-15,52;UBERON:0006241,1.46e-15,52;UBERON:0007135,1.46e-15,52;UBERON:0002346,9.20e-14,64;UBERON:0003075,9.20e-14,64;UBERON:0007284,9.20e-14,64;UBERON:0003080,1.33e-13,40;UBERON:0004684,5.65e-13,3;UBERON:0002275,5.65e-13,3;UBERON:0003056,2.01e-12,49;UBERON:0002038,3.29e-12,3;UBERON:0009663,3.29e-12,3;UBERON:0009661,3.29e-12,3;UBERON:0000125,3.29e-12,3;UBERON:0002308,3.29e-12,3;UBERON:0002420,9.83e-12,8;UBERON:0007245,9.83e-12,8;UBERON:0010009,9.83e-12,8;UBERON:0010011,9.83e-12,8;UBERON:0000454,9.83e-12,8;UBERON:0002780,1.00e-11,39;UBERON:0001890,1.00e-11,39;UBERON:0006240,1.00e-11,39;UBERON:0010371,1.12e-11,73;UBERON:0002020,3.56e-11,34;UBERON:0003528,4.29e-11,29;UBERON:0002791,4.29e-11,29;UBERON:0001893,4.29e-11,29;UBERON:0010314,1.30e-08,92;UBERON:0001896,1.78e-08,2;UBERON:0002298,1.78e-08,2;UBERON:0005290,1.78e-08,2;UBERON:0010096,1.78e-08,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0,7.70811166995721,19.5361627270337,17.664751324468,1.05509030184155,0.640413505216868,0.52091337055676,3.35019598801657,1.68828783009504,3.0559649555362,0.883885756421003,0.427115042397309,1.1183966749518,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98743836428936,5.03250663100489,0.628271760564322,1.39059456153821,1.27857728665165,12.0517065844545,8.76102820565891,0.611036183101898,0,0.505445516867349,0,0,0.689706313300419,0.540186389416048,0.452114453507145,0.884474488967262,0.512454881139399,1.03071897015702,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,1.68231958851302,0,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.49095073923223,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.64096361229084,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,1.92792789853084,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0.117357238645754,0.5208175393758,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,1.03552062350364,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0,0,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,0.177475806159338,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr10:111706991..111707011,+ | |||
}} |
Latest revision as of 21:16, 3 August 2015
Short description: | p@chr10:111706991..111707011, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:111706991..111707011, + |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.65e-13 | 3 |
neuron of the substantia nigra | 3.29e-12 | 3 |
CNS neuron (sensu Vertebrata) | 4.15e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.15e-12 | 23 |
neuron | 5.23e-08 | 33 |
neuronal stem cell | 5.23e-08 | 33 |
neuroblast | 5.23e-08 | 33 |
electrically signaling cell | 5.23e-08 | 33 |