FFCP PHASE1:Mm9::chr13:45042533..45042557,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:45042533..45042557,-|id=chr13:45042533..45042557,-|ontology_enrichment_celltype=CL:0000117!1.07e-18!23;CL:0000337!1.07e-18!23;CL:0000540!8.66e-15!33;CL:0000047!8.66e-15!33;CL:0000031!8.66e-15!33;CL:0000404!8.66e-15!33;CL:0000393!9.47e-11!39;CL:0000211!9.47e-11!39;CL:0000221!6.32e-09!44;CL:0000133!6.32e-09!44;CL:0002319!9.26e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-28,23;CL:0000337,1.19e-28,23;CL:0000540,1.20e-17,33;CL:0000047,1.20e-17,33;CL:0000031,1.20e-17,33;CL:0000404,1.20e-17,33;CL:0000393,8.29e-14,39;CL:0000211,8.29e-14,39;CL:0002319,7.28e-12,43;CL:0000221,1.95e-11,44;CL:0000133,1.95e-11,44;CL:0002609,1.89e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.37e-30!71;UBERON:0003075!1.37e-30!71;UBERON:0007284!1.37e-30!71;UBERON:0000033!1.63e-29!63;UBERON:0003056!2.07e-29!49;UBERON:0001049!3.02e-27!52;UBERON:0005068!3.02e-27!52;UBERON:0006241!3.02e-27!52;UBERON:0007135!3.02e-27!52;UBERON:0001017!4.37e-27!73;UBERON:0005743!4.37e-27!73;UBERON:0004121!1.61e-26!102;UBERON:0000924!1.61e-26!102;UBERON:0006601!1.61e-26!102;UBERON:0000073!1.06e-25!75;UBERON:0001016!1.06e-25!75;UBERON:0000955!1.95e-25!50;UBERON:0006238!1.95e-25!50;UBERON:0002616!8.76e-25!49;UBERON:0003080!3.45e-24!40;UBERON:0002020!5.35e-24!34;UBERON:0002780!1.25e-23!39;UBERON:0001890!1.25e-23!39;UBERON:0006240!1.25e-23!39;UBERON:0002791!6.64e-20!29;UBERON:0003528!6.64e-20!29;UBERON:0001893!6.64e-20!29;UBERON:0000153!1.15e-15!94;UBERON:0007811!1.47e-15!86;UBERON:0000956!2.01e-13!21;UBERON:0001869!2.01e-13!21;UBERON:0000203!2.01e-13!21;UBERON:0002619!9.24e-11!17;UBERON:0002021!3.58e-09!10;UBERON:0000411!3.58e-09!10;UBERON:0001950!3.58e-09!10;UBERON:0002420!9.41e-08!8;UBERON:0007245!9.41e-08!8;UBERON:0010009!9.41e-08!8;UBERON:0010011!9.41e-08!8;UBERON:0000454!9.41e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.86e-38,34;UBERON:0002346,3.51e-37,64;UBERON:0003075,3.51e-37,64;UBERON:0007284,3.51e-37,64;UBERON:0000073,1.13e-36,54;UBERON:0003056,4.19e-36,49;UBERON:0001049,1.71e-32,52;UBERON:0005068,1.71e-32,52;UBERON:0006241,1.71e-32,52;UBERON:0007135,1.71e-32,52;UBERON:0003528,1.94e-31,29;UBERON:0002791,1.94e-31,29;UBERON:0001893,1.94e-31,29;UBERON:0010371,7.83e-31,73;UBERON:0001017,3.11e-30,73;UBERON:0004121,3.53e-30,95;UBERON:0000924,3.53e-30,95;UBERON:0006601,3.53e-30,95;UBERON:0003080,3.49e-29,40;UBERON:0001016,4.74e-29,75;UBERON:0002780,2.56e-28,39;UBERON:0001890,2.56e-28,39;UBERON:0006240,2.56e-28,39;UBERON:0000955,3.45e-28,47;UBERON:0006238,3.45e-28,47;UBERON:0002616,3.13e-27,46;UBERON:0010314,1.49e-21,92;UBERON:0000956,4.10e-21,21;UBERON:0001869,4.10e-21,21;UBERON:0000203,4.10e-21,21;UBERON:0002619,6.91e-17,17;UBERON:0002021,1.40e-13,10;UBERON:0000411,1.40e-13,10;UBERON:0001950,1.40e-13,10;UBERON:0002420,2.41e-11,8;UBERON:0007245,2.41e-11,8;UBERON:0010009,2.41e-11,8;UBERON:0010011,2.41e-11,8;UBERON:0000454,2.41e-11,8;UBERON:0000025,1.77e-08,114;UBERON:0000369,2.68e-08,5;UBERON:0002435,2.68e-08,5;UBERON:0000204,2.68e-08,5;UBERON:0010082,2.68e-08,5;UBERON:0001948,1.75e-07,5;UBERON:0002315,1.75e-07,5;UBERON:0000970,2.39e-07,9;UBERON:0000019,2.39e-07,9;UBERON:0000047,2.39e-07,9;UBERON:0010312,2.39e-07,9;UBERON:0004088,2.39e-07,9;UBERON:0002104,2.39e-07,9;UBERON:0001456,2.39e-07,9;UBERON:0003072,2.39e-07,9;UBERON:0004128,2.39e-07,9;UBERON:0003071,2.39e-07,9;UBERON:0004111,3.06e-07,122|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,4.7609188134483,4.43681982454325,0,0,0,0,0,0,0,2.48855069540346,2.8351247049655,3.15487442027073,1.71390590642282,3.3130281142742,5.63457676388789,5.17565543498476,4.5960939330501,2.20231761998777,2.93680877595932,2.4577045320999,6.4624280987795,5.39777097254217,5.73004707612436,2.51264699101243,4.50210088025344,1.98637722109853,5.89257170947335,6.12198227436143,5.03278503728312,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,1.49790639404823,4.11750542536764,8.67015029578764,3.30266208365325,4.60287823194595,1.87009240103604,4.38051410282946,0,0,0,0.210441855886474,1.43132487258974,2.06911893990126,1.62055916824814,3.0140963567143,1.29269348387523,3.20284300712124,2.15513966487376,1.55222022443409,0.431135985865684,0.756424320671277,0.351902248327898,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0,0,0,0,0,0,0,3.36463917702604,3.39585220851639,0,0,0.639864751605702,0.464473343720877,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.52375192569864,0,0,0,0.780877488593277,0.646270193198397,0,0,0,0,0.876767573733936,0.395287777946524,1.92792789853084,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.776152102696527,0.428674070063185,0.354680467284547,0.713475270408282,1.31639216481697,1.522324745573,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,3.68260189205742,4.58316410751517,3.43706364687375,6.16574267793578,3.7769694869485,10.1253375034771,4.05289082901798,7.70342095273148,3.62432218226274,0.62272408550506,0,1.53660245178721,1.21553358534147,1.46729213839588,1.10306105070008,1.11123363900808,0.824140228955577,0.64183841918363,1.01078884705519,0.760437899670719,1.32038438970253,0.655490552289177,1.02440243847791,0.861532034334199,0.952587382566147,0.927074607558844,0.77163688185482,0.412085900803307,1.17759136107518,1.71434626192708,2.12970967391205,1.1921809497366,1.45346416632329,1.12931256498397,0.930760686808441,1.28049581010941,2.10455769150274,0.679020569229309,0.561142271657738,0.949080144993393,0.689531376628944,0.409231043169689,1.23949472948773,0.192906610981141,2.49810577937946,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.231867835620421|short_description=p@chr13:45042533..45042557,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:45042533..45042557,- | |||
|description=CAGE_peak_at_chr13:45042533..45042557,- | |||
|id=chr13:45042533..45042557,- | |||
|ontology_enrichment_celltype=CL:0000117!1.07e-18!23;CL:0000337!1.07e-18!23;CL:0000540!8.66e-15!33;CL:0000047!8.66e-15!33;CL:0000031!8.66e-15!33;CL:0000404!8.66e-15!33;CL:0000393!9.47e-11!39;CL:0000211!9.47e-11!39;CL:0000221!6.32e-09!44;CL:0000133!6.32e-09!44;CL:0002319!9.26e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-28,23;CL:0000337,1.19e-28,23;CL:0000540,1.20e-17,33;CL:0000047,1.20e-17,33;CL:0000031,1.20e-17,33;CL:0000404,1.20e-17,33;CL:0000393,8.29e-14,39;CL:0000211,8.29e-14,39;CL:0002319,7.28e-12,43;CL:0000221,1.95e-11,44;CL:0000133,1.95e-11,44;CL:0002609,1.89e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.37e-30!71;UBERON:0003075!1.37e-30!71;UBERON:0007284!1.37e-30!71;UBERON:0000033!1.63e-29!63;UBERON:0003056!2.07e-29!49;UBERON:0001049!3.02e-27!52;UBERON:0005068!3.02e-27!52;UBERON:0006241!3.02e-27!52;UBERON:0007135!3.02e-27!52;UBERON:0001017!4.37e-27!73;UBERON:0005743!4.37e-27!73;UBERON:0004121!1.61e-26!102;UBERON:0000924!1.61e-26!102;UBERON:0006601!1.61e-26!102;UBERON:0000073!1.06e-25!75;UBERON:0001016!1.06e-25!75;UBERON:0000955!1.95e-25!50;UBERON:0006238!1.95e-25!50;UBERON:0002616!8.76e-25!49;UBERON:0003080!3.45e-24!40;UBERON:0002020!5.35e-24!34;UBERON:0002780!1.25e-23!39;UBERON:0001890!1.25e-23!39;UBERON:0006240!1.25e-23!39;UBERON:0002791!6.64e-20!29;UBERON:0003528!6.64e-20!29;UBERON:0001893!6.64e-20!29;UBERON:0000153!1.15e-15!94;UBERON:0007811!1.47e-15!86;UBERON:0000956!2.01e-13!21;UBERON:0001869!2.01e-13!21;UBERON:0000203!2.01e-13!21;UBERON:0002619!9.24e-11!17;UBERON:0002021!3.58e-09!10;UBERON:0000411!3.58e-09!10;UBERON:0001950!3.58e-09!10;UBERON:0002420!9.41e-08!8;UBERON:0007245!9.41e-08!8;UBERON:0010009!9.41e-08!8;UBERON:0010011!9.41e-08!8;UBERON:0000454!9.41e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.86e-38,34;UBERON:0002346,3.51e-37,64;UBERON:0003075,3.51e-37,64;UBERON:0007284,3.51e-37,64;UBERON:0000073,1.13e-36,54;UBERON:0003056,4.19e-36,49;UBERON:0001049,1.71e-32,52;UBERON:0005068,1.71e-32,52;UBERON:0006241,1.71e-32,52;UBERON:0007135,1.71e-32,52;UBERON:0003528,1.94e-31,29;UBERON:0002791,1.94e-31,29;UBERON:0001893,1.94e-31,29;UBERON:0010371,7.83e-31,73;UBERON:0001017,3.11e-30,73;UBERON:0004121,3.53e-30,95;UBERON:0000924,3.53e-30,95;UBERON:0006601,3.53e-30,95;UBERON:0003080,3.49e-29,40;UBERON:0001016,4.74e-29,75;UBERON:0002780,2.56e-28,39;UBERON:0001890,2.56e-28,39;UBERON:0006240,2.56e-28,39;UBERON:0000955,3.45e-28,47;UBERON:0006238,3.45e-28,47;UBERON:0002616,3.13e-27,46;UBERON:0010314,1.49e-21,92;UBERON:0000956,4.10e-21,21;UBERON:0001869,4.10e-21,21;UBERON:0000203,4.10e-21,21;UBERON:0002619,6.91e-17,17;UBERON:0002021,1.40e-13,10;UBERON:0000411,1.40e-13,10;UBERON:0001950,1.40e-13,10;UBERON:0002420,2.41e-11,8;UBERON:0007245,2.41e-11,8;UBERON:0010009,2.41e-11,8;UBERON:0010011,2.41e-11,8;UBERON:0000454,2.41e-11,8;UBERON:0000025,1.77e-08,114;UBERON:0000369,2.68e-08,5;UBERON:0002435,2.68e-08,5;UBERON:0000204,2.68e-08,5;UBERON:0010082,2.68e-08,5;UBERON:0001948,1.75e-07,5;UBERON:0002315,1.75e-07,5;UBERON:0000970,2.39e-07,9;UBERON:0000019,2.39e-07,9;UBERON:0000047,2.39e-07,9;UBERON:0010312,2.39e-07,9;UBERON:0004088,2.39e-07,9;UBERON:0002104,2.39e-07,9;UBERON:0001456,2.39e-07,9;UBERON:0003072,2.39e-07,9;UBERON:0004128,2.39e-07,9;UBERON:0003071,2.39e-07,9;UBERON:0004111,3.06e-07,122 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,4.7609188134483,4.43681982454325,0,0,0,0,0,0,0,2.48855069540346,2.8351247049655,3.15487442027073,1.71390590642282,3.3130281142742,5.63457676388789,5.17565543498476,4.5960939330501,2.20231761998777,2.93680877595932,2.4577045320999,6.4624280987795,5.39777097254217,5.73004707612436,2.51264699101243,4.50210088025344,1.98637722109853,5.89257170947335,6.12198227436143,5.03278503728312,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,1.49790639404823,4.11750542536764,8.67015029578764,3.30266208365325,4.60287823194595,1.87009240103604,4.38051410282946,0,0,0,0.210441855886474,1.43132487258974,2.06911893990126,1.62055916824814,3.0140963567143,1.29269348387523,3.20284300712124,2.15513966487376,1.55222022443409,0.431135985865684,0.756424320671277,0.351902248327898,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0,0,0,0,0,0,0,3.36463917702604,3.39585220851639,0,0,0.639864751605702,0.464473343720877,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.52375192569864,0,0,0,0.780877488593277,0.646270193198397,0,0,0,0,0.876767573733936,0.395287777946524,1.92792789853084,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.776152102696527,0.428674070063185,0.354680467284547,0.713475270408282,1.31639216481697,1.522324745573,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,3.68260189205742,4.58316410751517,3.43706364687375,6.16574267793578,3.7769694869485,10.1253375034771,4.05289082901798,7.70342095273148,3.62432218226274,0.62272408550506,0,1.53660245178721,1.21553358534147,1.46729213839588,1.10306105070008,1.11123363900808,0.824140228955577,0.64183841918363,1.01078884705519,0.760437899670719,1.32038438970253,0.655490552289177,1.02440243847791,0.861532034334199,0.952587382566147,0.927074607558844,0.77163688185482,0.412085900803307,1.17759136107518,1.71434626192708,2.12970967391205,1.1921809497366,1.45346416632329,1.12931256498397,0.930760686808441,1.28049581010941,2.10455769150274,0.679020569229309,0.561142271657738,0.949080144993393,0.689531376628944,0.409231043169689,1.23949472948773,0.192906610981141,2.49810577937946,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr13:45042533..45042557,- | |||
}} |
Latest revision as of 00:49, 6 August 2015
Short description: | p@chr13:45042533..45042557, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:45042533..45042557, - |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.19e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-28 | 23 |
neuron | 1.20e-17 | 33 |
neuronal stem cell | 1.20e-17 | 33 |
neuroblast | 1.20e-17 | 33 |
electrically signaling cell | 1.20e-17 | 33 |
electrically responsive cell | 8.29e-14 | 39 |
electrically active cell | 8.29e-14 | 39 |
neural cell | 7.28e-12 | 43 |
ectodermal cell | 1.95e-11 | 44 |
neurectodermal cell | 1.95e-11 | 44 |
neuron of cerebral cortex | 1.89e-08 | 6 |