FFCP PHASE1:Mm9::chr15:96473050..96473103,-: Difference between revisions
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{{FFCP|EntrezGene=105727|HGNC=|UniProt=Q8K2P7|association_with_transcript=240bp_to_ENSMUST00000088452,NM_001166458,uc007xkj.2_5end|description=CAGE_peak_6_at_Slc38a1_5end|id=chr15:96473050..96473103,-|ontology_enrichment_celltype=CL:0000117!1.90e-10!23;CL:0000337!1.90e-10!23;CL:0000540!8.57e-08!33;CL:0000047!8.57e-08!33;CL:0000031!8.57e-08!33;CL:0000404!8.57e-08!33;CL:0002319!2.92e-07!43;CL:0000221!5.52e-07!44;CL:0000133!5.52e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.78e-12,23;CL:0000337,1.78e-12,23;CL:0000540,9.86e-09,33;CL:0000047,9.86e-09,33;CL:0000031,9.86e-09,33;CL:0000404,9.86e-09,33;CL:0000034,1.83e-08,97;CL:0002319,5.28e-08,43;CL:0000221,1.43e-07,44;CL:0000133,1.43e-07,44;CL:0000723,8.33e-07,91;CL:0000048,8.33e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.03e-17!73;UBERON:0005743!5.03e-17!73;UBERON:0000073!4.17e-16!75;UBERON:0001016!4.17e-16!75;UBERON:0001049!7.99e-15!52;UBERON:0005068!7.99e-15!52;UBERON:0006241!7.99e-15!52;UBERON:0007135!7.99e-15!52;UBERON:0002020!1.31e-14!34;UBERON:0000955!2.21e-14!50;UBERON:0006238!2.21e-14!50;UBERON:0000033!7.33e-14!63;UBERON:0002616!8.72e-14!49;UBERON:0002346!9.13e-13!71;UBERON:0003075!9.13e-13!71;UBERON:0007284!9.13e-13!71;UBERON:0002791!3.11e-12!29;UBERON:0003528!3.11e-12!29;UBERON:0001893!3.11e-12!29;UBERON:0004121!2.25e-11!102;UBERON:0000924!2.25e-11!102;UBERON:0006601!2.25e-11!102;UBERON:0003056!4.25e-11!49;UBERON:0007811!6.17e-11!86;UBERON:0003080!2.99e-10!40;UBERON:0000153!9.72e-10!94;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0000956!3.64e-09!21;UBERON:0001869!3.64e-09!21;UBERON:0000203!3.64e-09!21;UBERON:0002619!3.75e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-19,54;UBERON:0001017,2.44e-19,73;UBERON:0001016,3.55e-18,75;UBERON:0001049,1.03e-17,52;UBERON:0005068,1.03e-17,52;UBERON:0006241,1.03e-17,52;UBERON:0007135,1.03e-17,52;UBERON:0002020,1.37e-17,34;UBERON:0002346,4.40e-17,64;UBERON:0003075,4.40e-17,64;UBERON:0007284,4.40e-17,64;UBERON:0000955,7.81e-15,47;UBERON:0006238,7.81e-15,47;UBERON:0003528,1.14e-14,29;UBERON:0002791,1.14e-14,29;UBERON:0001893,1.14e-14,29;UBERON:0004121,3.19e-14,95;UBERON:0000924,3.19e-14,95;UBERON:0006601,3.19e-14,95;UBERON:0002616,3.92e-14,46;UBERON:0010371,1.87e-12,73;UBERON:0003056,7.40e-12,49;UBERON:0003080,1.11e-11,40;UBERON:0010314,2.44e-11,92;UBERON:0002780,5.48e-11,39;UBERON:0001890,5.48e-11,39;UBERON:0006240,5.48e-11,39;UBERON:0000956,6.67e-11,21;UBERON:0001869,6.67e-11,21;UBERON:0000203,6.67e-11,21;UBERON:0002619,1.17e-09,17;UBERON:0002021,9.97e-08,10;UBERON:0000411,9.97e-08,10;UBERON:0001950,9.97e-08,10;UBERON:0003076,3.62e-07,12;UBERON:0003057,3.62e-07,12|phase1_expression=0.320297694209588,0.697950815278722,0,0.90739263392049,0,0.33575854382378,0.934450562382103,0.903863264091034,2.25261955442667,0.936258105287974,0.171217968225505,0.239316476986009,0.856003649656029,1.31130603628496,1.99865857089398,1.61980213911861,0.699561878128147,9.77932712610537,12.614527891728,10.1853516431527,2.12608225377674,2.6808556824239,3.91799683708403,1.59992422793407,1.83527424853736,0,0,0.861884930743556,0.380046838912748,0.504060259519861,1.33038306393183,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.837063261473815,1.5626706890476,0.523523743973798,0,0,0,0,0,0,0,1.96222640742402,1.31811709640683,1.74986909166855,0.979904951377538,1.43752564364972,15.7715649694272,5.80289713609076,2.01656279485478,1.02903774414379,0.573066879877513,0.515672092277442,3.23706337375356,5.28990979272033,1.90149421051854,0,0.889294796111139,1.3498495759221,1.97773272513395,4.9733608046227,1.19840044207362,1.92109152660777,1.45165457231869,1.89008313664367,1.47227472945967,4.85606673486466,6.62605622854841,2.44981598429908,1.62937300731002,1.83843757322004,18.7196997698961,14.6840438797966,15.0534402591119,2.76961204233407,2.74462930807229,2.08365348222704,14.2383329490704,5.06486349028512,11.7654650788144,7.66034322231536,5.26775218956681,3.16879057903011,0.530083353332288,0.377857800533928,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.506719730950197,0,0.22836775943812,12.6879562987114,0.445326417194474,0.346970653532272,0.608930956624282,0.461230994512117,1.05505848386836,0.587943535678524,0.125666591329675,0.988779870937496,0.289198713839823,1.76922110389975,0.161766849947409,1.76673214768315,1.93950101254089,0,14.9318206475889,7.74952815209784,1.02182822083437,7.54835284387298,3.59941638596045,4.95573885584952,14.0803201040533,6.8625090422794,1.00523481690292,10.2556348913443,7.41574826257959,13.9217989854905,8.27430441645564,0.611036183101898,1.61729061793121,0,1.26265113531884,0.780722657776222,0.689706313300419,0.720248519221397,1.35634336052144,2.65342346690179,2.0498195245576,2.15513966487376,4.39795730256327,1.07783996466421,0.189106080167819,0.703804496655795,0.657587197282725,0.834141747676794,0.348252166522167,0,0.199034266818493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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:105727 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K2P7 | |||
|association_with_transcript=240bp_to_ENSMUST00000088452,NM_001166458,uc007xkj.2_5end | |||
|cluster_id=chr15:96473050..96473103,- | |||
|description=CAGE_peak_6_at_Slc38a1_5end | |||
|id=chr15:96473050..96473103,- | |||
|ontology_enrichment_celltype=CL:0000117!1.90e-10!23;CL:0000337!1.90e-10!23;CL:0000540!8.57e-08!33;CL:0000047!8.57e-08!33;CL:0000031!8.57e-08!33;CL:0000404!8.57e-08!33;CL:0002319!2.92e-07!43;CL:0000221!5.52e-07!44;CL:0000133!5.52e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.78e-12,23;CL:0000337,1.78e-12,23;CL:0000540,9.86e-09,33;CL:0000047,9.86e-09,33;CL:0000031,9.86e-09,33;CL:0000404,9.86e-09,33;CL:0000034,1.83e-08,97;CL:0002319,5.28e-08,43;CL:0000221,1.43e-07,44;CL:0000133,1.43e-07,44;CL:0000723,8.33e-07,91;CL:0000048,8.33e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.03e-17!73;UBERON:0005743!5.03e-17!73;UBERON:0000073!4.17e-16!75;UBERON:0001016!4.17e-16!75;UBERON:0001049!7.99e-15!52;UBERON:0005068!7.99e-15!52;UBERON:0006241!7.99e-15!52;UBERON:0007135!7.99e-15!52;UBERON:0002020!1.31e-14!34;UBERON:0000955!2.21e-14!50;UBERON:0006238!2.21e-14!50;UBERON:0000033!7.33e-14!63;UBERON:0002616!8.72e-14!49;UBERON:0002346!9.13e-13!71;UBERON:0003075!9.13e-13!71;UBERON:0007284!9.13e-13!71;UBERON:0002791!3.11e-12!29;UBERON:0003528!3.11e-12!29;UBERON:0001893!3.11e-12!29;UBERON:0004121!2.25e-11!102;UBERON:0000924!2.25e-11!102;UBERON:0006601!2.25e-11!102;UBERON:0003056!4.25e-11!49;UBERON:0007811!6.17e-11!86;UBERON:0003080!2.99e-10!40;UBERON:0000153!9.72e-10!94;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0000956!3.64e-09!21;UBERON:0001869!3.64e-09!21;UBERON:0000203!3.64e-09!21;UBERON:0002619!3.75e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-19,54;UBERON:0001017,2.44e-19,73;UBERON:0001016,3.55e-18,75;UBERON:0001049,1.03e-17,52;UBERON:0005068,1.03e-17,52;UBERON:0006241,1.03e-17,52;UBERON:0007135,1.03e-17,52;UBERON:0002020,1.37e-17,34;UBERON:0002346,4.40e-17,64;UBERON:0003075,4.40e-17,64;UBERON:0007284,4.40e-17,64;UBERON:0000955,7.81e-15,47;UBERON:0006238,7.81e-15,47;UBERON:0003528,1.14e-14,29;UBERON:0002791,1.14e-14,29;UBERON:0001893,1.14e-14,29;UBERON:0004121,3.19e-14,95;UBERON:0000924,3.19e-14,95;UBERON:0006601,3.19e-14,95;UBERON:0002616,3.92e-14,46;UBERON:0010371,1.87e-12,73;UBERON:0003056,7.40e-12,49;UBERON:0003080,1.11e-11,40;UBERON:0010314,2.44e-11,92;UBERON:0002780,5.48e-11,39;UBERON:0001890,5.48e-11,39;UBERON:0006240,5.48e-11,39;UBERON:0000956,6.67e-11,21;UBERON:0001869,6.67e-11,21;UBERON:0000203,6.67e-11,21;UBERON:0002619,1.17e-09,17;UBERON:0002021,9.97e-08,10;UBERON:0000411,9.97e-08,10;UBERON:0001950,9.97e-08,10;UBERON:0003076,3.62e-07,12;UBERON:0003057,3.62e-07,12 | |||
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| |||
|short_description=p6@Slc38a1 | |||
}} |
Revision as of 21:56, 5 August 2015
Short description: | p6@Slc38a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Slc38a1_5end |
Coexpression cluster: | NA |
Association with transcript: | 240bp_to_ENSMUST00000088452, NM_001166458, uc007xkj.2_5end |
EntrezGene: | 105727 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.78e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.78e-12 | 23 |
neuron | 9.86e-09 | 33 |
neuronal stem cell | 9.86e-09 | 33 |
neuroblast | 9.86e-09 | 33 |
electrically signaling cell | 9.86e-09 | 33 |
stem cell | 1.83e-08 | 97 |
neural cell | 5.28e-08 | 43 |
ectodermal cell | 1.43e-07 | 44 |
neurectodermal cell | 1.43e-07 | 44 |
somatic stem cell | 8.33e-07 | 91 |
multi fate stem cell | 8.33e-07 | 91 |