FFCP PHASE1:Mm9::chr2:151907368..151907379,+: Difference between revisions
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{{FFCP|EntrezGene=545474|HGNC=|MCL_coexpression_id=22|UniProt=Q8BTH6|association_with_transcript=103bp_to_ENSMUST00000064061,NM_001160410,uc012cgb.1_5end|description=CAGE_peak_8_at_Scrt2_5end|id=chr2:151907368..151907379,+|ontology_enrichment_celltype=CL:0000117!1.38e-20!23;CL:0000337!1.38e-20!23;CL:0000540!2.57e-12!33;CL:0000047!2.57e-12!33;CL:0000031!2.57e-12!33;CL:0000404!2.57e-12!33;CL:0002609!1.53e-09!6;CL:0000393!1.86e-09!39;CL:0000211!1.86e-09!39;CL:0002319!5.06e-08!43;CL:0000221!1.04e-07!44;CL:0000133!1.04e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-38,23;CL:0000337,1.85e-38,23;CL:0002609,3.41e-29,6;CL:0000540,3.46e-26,33;CL:0000047,3.46e-26,33;CL:0000031,3.46e-26,33;CL:0000404,3.46e-26,33;CL:0000393,7.77e-22,39;CL:0000211,7.77e-22,39;CL:0002319,1.32e-19,43;CL:0000221,4.10e-19,44;CL:0000133,4.10e-19,44;CL:0002608,2.67e-15,3;CL:0000120,2.98e-15,3;CL:0002613,2.84e-14,3;CL:0002321,3.37e-11,70;CL:0000723,4.32e-08,91;CL:0000048,4.32e-08,91;CL:0000034,1.90e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.66e-26!63;UBERON:0003056!5.65e-22!49;UBERON:0002346!8.61e-22!71;UBERON:0003075!8.61e-22!71;UBERON:0007284!8.61e-22!71;UBERON:0000955!1.66e-20!50;UBERON:0006238!1.66e-20!50;UBERON:0002616!1.61e-19!49;UBERON:0004121!6.57e-19!102;UBERON:0000924!6.57e-19!102;UBERON:0006601!6.57e-19!102;UBERON:0001017!1.12e-18!73;UBERON:0005743!1.12e-18!73;UBERON:0001049!1.46e-18!52;UBERON:0005068!1.46e-18!52;UBERON:0006241!1.46e-18!52;UBERON:0007135!1.46e-18!52;UBERON:0000073!7.58e-18!75;UBERON:0001016!7.58e-18!75;UBERON:0007811!2.95e-16!86;UBERON:0002020!1.21e-15!34;UBERON:0003080!1.29e-14!40;UBERON:0002791!1.54e-14!29;UBERON:0003528!1.54e-14!29;UBERON:0001893!1.54e-14!29;UBERON:0000153!8.54e-14!94;UBERON:0002780!1.01e-13!39;UBERON:0001890!1.01e-13!39;UBERON:0006240!1.01e-13!39;UBERON:0000970!5.42e-09!9;UBERON:0000019!5.42e-09!9;UBERON:0000047!5.42e-09!9;UBERON:0004088!5.42e-09!9;UBERON:0002104!5.42e-09!9;UBERON:0001456!5.42e-09!9;UBERON:0003072!5.42e-09!9;UBERON:0003071!5.42e-09!9;UBERON:0004128!5.42e-09!9;UBERON:0000956!1.58e-08!21;UBERON:0001869!1.58e-08!21;UBERON:0000203!1.58e-08!21;UBERON:0002420!7.84e-08!8;UBERON:0007245!7.84e-08!8;UBERON:0010009!7.84e-08!8;UBERON:0010011!7.84e-08!8;UBERON:0000454!7.84e-08!8;UBERON:0000369!1.07e-07!5;UBERON:0002435!1.07e-07!5;UBERON:0000204!1.07e-07!5;UBERON:0010082!1.07e-07!5;UBERON:0001444!5.33e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.30e-25,29;UBERON:0002791,1.30e-25,29;UBERON:0001893,1.30e-25,29;UBERON:0002020,4.37e-25,34;UBERON:0000369,8.42e-23,5;UBERON:0002435,8.42e-23,5;UBERON:0000204,8.42e-23,5;UBERON:0010082,8.42e-23,5;UBERON:0002780,1.62e-21,39;UBERON:0001890,1.62e-21,39;UBERON:0006240,1.62e-21,39;UBERON:0003080,6.30e-21,40;UBERON:0001017,8.35e-21,73;UBERON:0001016,3.49e-20,75;UBERON:0000073,8.17e-20,54;UBERON:0001049,4.65e-18,52;UBERON:0005068,4.65e-18,52;UBERON:0006241,4.65e-18,52;UBERON:0007135,4.65e-18,52;UBERON:0002616,6.39e-18,46;UBERON:0000955,1.71e-17,47;UBERON:0006238,1.71e-17,47;UBERON:0001954,6.23e-17,7;UBERON:0003022,6.23e-17,7;UBERON:0002421,6.23e-17,7;UBERON:0000349,6.23e-17,7;UBERON:0002600,6.23e-17,7;UBERON:0003056,1.08e-16,49;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0002346,3.04e-14,64;UBERON:0003075,3.04e-14,64;UBERON:0007284,3.04e-14,64;UBERON:0002420,3.11e-14,8;UBERON:0007245,3.11e-14,8;UBERON:0010009,3.11e-14,8;UBERON:0010011,3.11e-14,8;UBERON:0000454,3.11e-14,8;UBERON:0000956,8.70e-14,21;UBERON:0001869,8.70e-14,21;UBERON:0000203,8.70e-14,21;UBERON:0010371,3.36e-12,73;UBERON:0010314,3.45e-09,92;UBERON:0000025,6.04e-07,114;UBERON:0002619,7.10e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,4.45865332926454,2.97013064329719,2.73422449756797,0,0.441737081903227,1.83736198822431,2.58782771749238,4.5960939330501,1.10115880999389,0.766124028511126,0.614426133024974,1.71452174049252,1.28082701043374,1.56274011167028,0.558365998002762,0,0.15279824777681,0,0.142371680799103,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.599162557619291,1.37250180845588,2.1361239859187,0.173824320192276,0.511430914660661,1.0389402227978,0.162241263067758,0,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.900310649026746,0.30140963567143,0.476255494059295,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,2.36680608472354,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.512200817262403,0,0.838452650511929,0,0,0,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0.192075457214608,0.114870937911227,0.952587382566147,0.463537303779422,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.548783918618318,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0,0.309873682371932,0.385813221962283,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0|short_description=p8@Scrt2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:545474 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BTH6 | |||
|association_with_transcript=103bp_to_ENSMUST00000064061,NM_001160410,uc012cgb.1_5end | |||
|cluster_id=chr2:151907368..151907379,+ | |||
|description=CAGE_peak_8_at_Scrt2_5end | |||
|id=chr2:151907368..151907379,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.38e-20!23;CL:0000337!1.38e-20!23;CL:0000540!2.57e-12!33;CL:0000047!2.57e-12!33;CL:0000031!2.57e-12!33;CL:0000404!2.57e-12!33;CL:0002609!1.53e-09!6;CL:0000393!1.86e-09!39;CL:0000211!1.86e-09!39;CL:0002319!5.06e-08!43;CL:0000221!1.04e-07!44;CL:0000133!1.04e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-38,23;CL:0000337,1.85e-38,23;CL:0002609,3.41e-29,6;CL:0000540,3.46e-26,33;CL:0000047,3.46e-26,33;CL:0000031,3.46e-26,33;CL:0000404,3.46e-26,33;CL:0000393,7.77e-22,39;CL:0000211,7.77e-22,39;CL:0002319,1.32e-19,43;CL:0000221,4.10e-19,44;CL:0000133,4.10e-19,44;CL:0002608,2.67e-15,3;CL:0000120,2.98e-15,3;CL:0002613,2.84e-14,3;CL:0002321,3.37e-11,70;CL:0000723,4.32e-08,91;CL:0000048,4.32e-08,91;CL:0000034,1.90e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.66e-26!63;UBERON:0003056!5.65e-22!49;UBERON:0002346!8.61e-22!71;UBERON:0003075!8.61e-22!71;UBERON:0007284!8.61e-22!71;UBERON:0000955!1.66e-20!50;UBERON:0006238!1.66e-20!50;UBERON:0002616!1.61e-19!49;UBERON:0004121!6.57e-19!102;UBERON:0000924!6.57e-19!102;UBERON:0006601!6.57e-19!102;UBERON:0001017!1.12e-18!73;UBERON:0005743!1.12e-18!73;UBERON:0001049!1.46e-18!52;UBERON:0005068!1.46e-18!52;UBERON:0006241!1.46e-18!52;UBERON:0007135!1.46e-18!52;UBERON:0000073!7.58e-18!75;UBERON:0001016!7.58e-18!75;UBERON:0007811!2.95e-16!86;UBERON:0002020!1.21e-15!34;UBERON:0003080!1.29e-14!40;UBERON:0002791!1.54e-14!29;UBERON:0003528!1.54e-14!29;UBERON:0001893!1.54e-14!29;UBERON:0000153!8.54e-14!94;UBERON:0002780!1.01e-13!39;UBERON:0001890!1.01e-13!39;UBERON:0006240!1.01e-13!39;UBERON:0000970!5.42e-09!9;UBERON:0000019!5.42e-09!9;UBERON:0000047!5.42e-09!9;UBERON:0004088!5.42e-09!9;UBERON:0002104!5.42e-09!9;UBERON:0001456!5.42e-09!9;UBERON:0003072!5.42e-09!9;UBERON:0003071!5.42e-09!9;UBERON:0004128!5.42e-09!9;UBERON:0000956!1.58e-08!21;UBERON:0001869!1.58e-08!21;UBERON:0000203!1.58e-08!21;UBERON:0002420!7.84e-08!8;UBERON:0007245!7.84e-08!8;UBERON:0010009!7.84e-08!8;UBERON:0010011!7.84e-08!8;UBERON:0000454!7.84e-08!8;UBERON:0000369!1.07e-07!5;UBERON:0002435!1.07e-07!5;UBERON:0000204!1.07e-07!5;UBERON:0010082!1.07e-07!5;UBERON:0001444!5.33e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.30e-25,29;UBERON:0002791,1.30e-25,29;UBERON:0001893,1.30e-25,29;UBERON:0002020,4.37e-25,34;UBERON:0000369,8.42e-23,5;UBERON:0002435,8.42e-23,5;UBERON:0000204,8.42e-23,5;UBERON:0010082,8.42e-23,5;UBERON:0002780,1.62e-21,39;UBERON:0001890,1.62e-21,39;UBERON:0006240,1.62e-21,39;UBERON:0003080,6.30e-21,40;UBERON:0001017,8.35e-21,73;UBERON:0001016,3.49e-20,75;UBERON:0000073,8.17e-20,54;UBERON:0001049,4.65e-18,52;UBERON:0005068,4.65e-18,52;UBERON:0006241,4.65e-18,52;UBERON:0007135,4.65e-18,52;UBERON:0002616,6.39e-18,46;UBERON:0000955,1.71e-17,47;UBERON:0006238,1.71e-17,47;UBERON:0001954,6.23e-17,7;UBERON:0003022,6.23e-17,7;UBERON:0002421,6.23e-17,7;UBERON:0000349,6.23e-17,7;UBERON:0002600,6.23e-17,7;UBERON:0003056,1.08e-16,49;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0002346,3.04e-14,64;UBERON:0003075,3.04e-14,64;UBERON:0007284,3.04e-14,64;UBERON:0002420,3.11e-14,8;UBERON:0007245,3.11e-14,8;UBERON:0010009,3.11e-14,8;UBERON:0010011,3.11e-14,8;UBERON:0000454,3.11e-14,8;UBERON:0000956,8.70e-14,21;UBERON:0001869,8.70e-14,21;UBERON:0000203,8.70e-14,21;UBERON:0010371,3.36e-12,73;UBERON:0010314,3.45e-09,92;UBERON:0000025,6.04e-07,114;UBERON:0002619,7.10e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,4.45865332926454,2.97013064329719,2.73422449756797,0,0.441737081903227,1.83736198822431,2.58782771749238,4.5960939330501,1.10115880999389,0.766124028511126,0.614426133024974,1.71452174049252,1.28082701043374,1.56274011167028,0.558365998002762,0,0.15279824777681,0,0.142371680799103,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.599162557619291,1.37250180845588,2.1361239859187,0.173824320192276,0.511430914660661,1.0389402227978,0.162241263067758,0,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.900310649026746,0.30140963567143,0.476255494059295,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,2.36680608472354,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.512200817262403,0,0.838452650511929,0,0,0,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0.192075457214608,0.114870937911227,0.952587382566147,0.463537303779422,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.548783918618318,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0,0.309873682371932,0.385813221962283,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p8@Scrt2 | |||
}} |
Revision as of 06:25, 4 August 2015
Short description: | p8@Scrt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Scrt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 103bp_to_ENSMUST00000064061, NM_001160410, uc012cgb.1_5end |
EntrezGene: | 545474 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.85e-38 | 23 |
neuroblast (sensu Vertebrata) | 1.85e-38 | 23 |
neuron of cerebral cortex | 3.41e-29 | 6 |
neuron | 3.46e-26 | 33 |
neuronal stem cell | 3.46e-26 | 33 |
neuroblast | 3.46e-26 | 33 |
electrically signaling cell | 3.46e-26 | 33 |
electrically responsive cell | 7.77e-22 | 39 |
electrically active cell | 7.77e-22 | 39 |
neural cell | 1.32e-19 | 43 |
ectodermal cell | 4.10e-19 | 44 |
neurectodermal cell | 4.10e-19 | 44 |
hippocampal neuron | 2.67e-15 | 3 |
granule cell | 2.98e-15 | 3 |
striatum neuron | 2.84e-14 | 3 |
embryonic cell | 3.37e-11 | 70 |
somatic stem cell | 4.32e-08 | 91 |
multi fate stem cell | 4.32e-08 | 91 |
stem cell | 1.90e-07 | 97 |