FFCP PHASE1:Mm9::chr2:157740396..157740407,+: Difference between revisions
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{{FFCP|EntrezGene=277432|HGNC=|MCL_coexpression_id=87|UniProt=A2ACD2,Q6PDS0|association_with_transcript=7bp_to_ENSMUST00000109523,NM_198627,uc012cic.1_5end|description=CAGE_peak_2_at_Vstm2l_5end|id=chr2:157740396..157740407,+|ontology_enrichment_celltype=CL:0000540!5.17e-17!33;CL:0000047!5.17e-17!33;CL:0000031!5.17e-17!33;CL:0000404!5.17e-17!33;CL:0000117!2.13e-15!23;CL:0000337!2.13e-15!23;CL:0000393!3.83e-12!39;CL:0000211!3.83e-12!39;CL:0000221!1.41e-11!44;CL:0000133!1.41e-11!44;CL:0002319!2.24e-11!43;CL:0000055!6.63e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.97e-17,23;CL:0000337,5.97e-17,23;CL:0000540,1.23e-14,33;CL:0000047,1.23e-14,33;CL:0000031,1.23e-14,33;CL:0000404,1.23e-14,33;CL:0000393,5.22e-11,39;CL:0000211,5.22e-11,39;CL:0002319,3.38e-09,43;CL:0000221,8.40e-09,44;CL:0000133,8.40e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.77e-31!71;UBERON:0003075!2.77e-31!71;UBERON:0007284!2.77e-31!71;UBERON:0001017!1.72e-28!73;UBERON:0005743!1.72e-28!73;UBERON:0004121!1.85e-28!102;UBERON:0000924!1.85e-28!102;UBERON:0006601!1.85e-28!102;UBERON:0000073!2.76e-28!75;UBERON:0001016!2.76e-28!75;UBERON:0001049!1.11e-23!52;UBERON:0005068!1.11e-23!52;UBERON:0006241!1.11e-23!52;UBERON:0007135!1.11e-23!52;UBERON:0000033!1.37e-23!63;UBERON:0003056!5.77e-22!49;UBERON:0000955!1.22e-21!50;UBERON:0006238!1.22e-21!50;UBERON:0002616!4.77e-21!49;UBERON:0002020!1.12e-19!34;UBERON:0003080!5.02e-19!40;UBERON:0002780!3.13e-18!39;UBERON:0001890!3.13e-18!39;UBERON:0006240!3.13e-18!39;UBERON:0002791!1.61e-15!29;UBERON:0003528!1.61e-15!29;UBERON:0001893!1.61e-15!29;UBERON:0007811!1.22e-12!86;UBERON:0000956!7.37e-10!21;UBERON:0001869!7.37e-10!21;UBERON:0000203!7.37e-10!21;UBERON:0000153!1.04e-09!94;UBERON:0002619!2.40e-09!17;UBERON:0002021!6.74e-08!10;UBERON:0000411!6.74e-08!10;UBERON:0001950!6.74e-08!10;UBERON:0002420!3.57e-07!8;UBERON:0007245!3.57e-07!8;UBERON:0010009!3.57e-07!8;UBERON:0010011!3.57e-07!8;UBERON:0000454!3.57e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.11e-31,64;UBERON:0003075,4.11e-31,64;UBERON:0007284,4.11e-31,64;UBERON:0001017,1.12e-28,73;UBERON:0000073,7.53e-28,54;UBERON:0001016,2.16e-27,75;UBERON:0001049,8.57e-26,52;UBERON:0005068,8.57e-26,52;UBERON:0006241,8.57e-26,52;UBERON:0007135,8.57e-26,52;UBERON:0004121,2.96e-25,95;UBERON:0000924,2.96e-25,95;UBERON:0006601,2.96e-25,95;UBERON:0010371,5.80e-25,73;UBERON:0003056,1.96e-23,49;UBERON:0002020,3.74e-22,34;UBERON:0010314,4.69e-21,92;UBERON:0000955,1.67e-20,47;UBERON:0006238,1.67e-20,47;UBERON:0003080,3.80e-20,40;UBERON:0002616,8.95e-20,46;UBERON:0002780,3.77e-19,39;UBERON:0001890,3.77e-19,39;UBERON:0006240,3.77e-19,39;UBERON:0003528,7.77e-17,29;UBERON:0002791,7.77e-17,29;UBERON:0001893,7.77e-17,29;UBERON:0002619,2.42e-11,17;UBERON:0002021,5.29e-10,10;UBERON:0000411,5.29e-10,10;UBERON:0001950,5.29e-10,10;UBERON:0000956,1.06e-09,21;UBERON:0001869,1.06e-09,21;UBERON:0000203,1.06e-09,21;UBERON:0002420,4.84e-09,8;UBERON:0007245,4.84e-09,8;UBERON:0010009,4.84e-09,8;UBERON:0010011,4.84e-09,8;UBERON:0000454,4.84e-09,8;UBERON:0002240,1.20e-07,6;UBERON:0005174,1.20e-07,6;UBERON:0001137,1.20e-07,6;UBERON:0001948,6.45e-07,5;UBERON:0002315,6.45e-07,5|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,30.5497855897993,32.797440714866,38.6637156138769,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.420649922702764,33.9924671440526,32.6885440608388,3.67472397644862,2.77951865952885,11.0306254393203,14.3150645299205,10.3426743849002,9.98442466165583,17.9365351313064,14.1805847583735,11.9810075228055,11.725685958058,11.8180148106653,9.47349136216223,36.8285731842085,25.9116459054367,33.9246991402047,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0,0.593768556259299,2.60227990149204,3.34912026143355,4.61230994512117,2.86373017049983,2.58695155698551,0.376999773989026,0,0.144599356919912,0,0,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,20.5213175984607,10.5225138648284,14.5759048450923,11.298580812498,7.41574826257959,9.97382613885888,9.73447578406546,0.203678727700633,0,0,1.47309299120532,0.130120442962704,2.5289231487682,3.78130472591233,2.26057226753573,1.90502197623718,1.15302348256365,3.09215691047105,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,5.46753866266731,5.76265829323993,0,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0.988193728344065,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0,0.569003702859245,0.685491075658373,0,0,0.387904974335251,0.49095073923223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,8.08760637486202,0,0,2.83957397474631,3.12350995437311,1.07711698866399,0.238968797952552,0.445597348164788,0.849229592366497,0.809621403349789,1.75353514746787,1.58115111178609,3.85585579706168,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,1.06949213515416,0.632073515871632,0,0,3.74483566329167,0,0.129358683782755,0.857348140126369,1.77340233642274,3.21063871683727,2.96188237083818,4.87143918583359,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,7.97328798645192,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0,0.129614973291793,0,0,0,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0,0,0,0,10.7302850097243,9.66682996665071,10.8850147553485,8.42080593484069,9.59115527678899,9.82012066606611,5.40018000185445,13.9599572999508,9.5159905886683,11.9084871702919,0.726511433089237,1.59609949360412,2.04880326904961,2.18796045361465,1.67690530102386,2.20612210140017,2.889207461421,2.47242068686673,2.88827288632634,2.52697211763797,2.28131369901216,3.2066478035633,1.68554713445788,2.24088033417042,1.95280594449085,1.90517476513229,2.78122382267653,1.35036454324594,1.64834360321323,2.50238164228475,3.42869252385415,1.95223386775271,1.43061713968393,2.61623549938191,2.72917203204459,1.77690676572521,2.19513567447327,2.10455769150274,1.35804113845862,3.36685362994643,2.60997039873183,2.26560309463796,1.63692417267876,2.47898945897546,2.12197272079256,6.99469618226249,2.57324769289949,1.93383948643468,2.10417165275728,0.882365676478062,0.463735671240843|short_description=p2@Vstm2l}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:277432 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ACD2,uniprot:Q6PDS0 | |||
|association_with_transcript=7bp_to_ENSMUST00000109523,NM_198627,uc012cic.1_5end | |||
|cluster_id=chr2:157740396..157740407,+ | |||
|description=CAGE_peak_2_at_Vstm2l_5end | |||
|id=chr2:157740396..157740407,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.17e-17!33;CL:0000047!5.17e-17!33;CL:0000031!5.17e-17!33;CL:0000404!5.17e-17!33;CL:0000117!2.13e-15!23;CL:0000337!2.13e-15!23;CL:0000393!3.83e-12!39;CL:0000211!3.83e-12!39;CL:0000221!1.41e-11!44;CL:0000133!1.41e-11!44;CL:0002319!2.24e-11!43;CL:0000055!6.63e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.97e-17,23;CL:0000337,5.97e-17,23;CL:0000540,1.23e-14,33;CL:0000047,1.23e-14,33;CL:0000031,1.23e-14,33;CL:0000404,1.23e-14,33;CL:0000393,5.22e-11,39;CL:0000211,5.22e-11,39;CL:0002319,3.38e-09,43;CL:0000221,8.40e-09,44;CL:0000133,8.40e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.77e-31!71;UBERON:0003075!2.77e-31!71;UBERON:0007284!2.77e-31!71;UBERON:0001017!1.72e-28!73;UBERON:0005743!1.72e-28!73;UBERON:0004121!1.85e-28!102;UBERON:0000924!1.85e-28!102;UBERON:0006601!1.85e-28!102;UBERON:0000073!2.76e-28!75;UBERON:0001016!2.76e-28!75;UBERON:0001049!1.11e-23!52;UBERON:0005068!1.11e-23!52;UBERON:0006241!1.11e-23!52;UBERON:0007135!1.11e-23!52;UBERON:0000033!1.37e-23!63;UBERON:0003056!5.77e-22!49;UBERON:0000955!1.22e-21!50;UBERON:0006238!1.22e-21!50;UBERON:0002616!4.77e-21!49;UBERON:0002020!1.12e-19!34;UBERON:0003080!5.02e-19!40;UBERON:0002780!3.13e-18!39;UBERON:0001890!3.13e-18!39;UBERON:0006240!3.13e-18!39;UBERON:0002791!1.61e-15!29;UBERON:0003528!1.61e-15!29;UBERON:0001893!1.61e-15!29;UBERON:0007811!1.22e-12!86;UBERON:0000956!7.37e-10!21;UBERON:0001869!7.37e-10!21;UBERON:0000203!7.37e-10!21;UBERON:0000153!1.04e-09!94;UBERON:0002619!2.40e-09!17;UBERON:0002021!6.74e-08!10;UBERON:0000411!6.74e-08!10;UBERON:0001950!6.74e-08!10;UBERON:0002420!3.57e-07!8;UBERON:0007245!3.57e-07!8;UBERON:0010009!3.57e-07!8;UBERON:0010011!3.57e-07!8;UBERON:0000454!3.57e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.11e-31,64;UBERON:0003075,4.11e-31,64;UBERON:0007284,4.11e-31,64;UBERON:0001017,1.12e-28,73;UBERON:0000073,7.53e-28,54;UBERON:0001016,2.16e-27,75;UBERON:0001049,8.57e-26,52;UBERON:0005068,8.57e-26,52;UBERON:0006241,8.57e-26,52;UBERON:0007135,8.57e-26,52;UBERON:0004121,2.96e-25,95;UBERON:0000924,2.96e-25,95;UBERON:0006601,2.96e-25,95;UBERON:0010371,5.80e-25,73;UBERON:0003056,1.96e-23,49;UBERON:0002020,3.74e-22,34;UBERON:0010314,4.69e-21,92;UBERON:0000955,1.67e-20,47;UBERON:0006238,1.67e-20,47;UBERON:0003080,3.80e-20,40;UBERON:0002616,8.95e-20,46;UBERON:0002780,3.77e-19,39;UBERON:0001890,3.77e-19,39;UBERON:0006240,3.77e-19,39;UBERON:0003528,7.77e-17,29;UBERON:0002791,7.77e-17,29;UBERON:0001893,7.77e-17,29;UBERON:0002619,2.42e-11,17;UBERON:0002021,5.29e-10,10;UBERON:0000411,5.29e-10,10;UBERON:0001950,5.29e-10,10;UBERON:0000956,1.06e-09,21;UBERON:0001869,1.06e-09,21;UBERON:0000203,1.06e-09,21;UBERON:0002420,4.84e-09,8;UBERON:0007245,4.84e-09,8;UBERON:0010009,4.84e-09,8;UBERON:0010011,4.84e-09,8;UBERON:0000454,4.84e-09,8;UBERON:0002240,1.20e-07,6;UBERON:0005174,1.20e-07,6;UBERON:0001137,1.20e-07,6;UBERON:0001948,6.45e-07,5;UBERON:0002315,6.45e-07,5 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,30.5497855897993,32.797440714866,38.6637156138769,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.420649922702764,33.9924671440526,32.6885440608388,3.67472397644862,2.77951865952885,11.0306254393203,14.3150645299205,10.3426743849002,9.98442466165583,17.9365351313064,14.1805847583735,11.9810075228055,11.725685958058,11.8180148106653,9.47349136216223,36.8285731842085,25.9116459054367,33.9246991402047,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0,0.593768556259299,2.60227990149204,3.34912026143355,4.61230994512117,2.86373017049983,2.58695155698551,0.376999773989026,0,0.144599356919912,0,0,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,20.5213175984607,10.5225138648284,14.5759048450923,11.298580812498,7.41574826257959,9.97382613885888,9.73447578406546,0.203678727700633,0,0,1.47309299120532,0.130120442962704,2.5289231487682,3.78130472591233,2.26057226753573,1.90502197623718,1.15302348256365,3.09215691047105,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,5.46753866266731,5.76265829323993,0,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0.988193728344065,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0,0.569003702859245,0.685491075658373,0,0,0.387904974335251,0.49095073923223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,8.08760637486202,0,0,2.83957397474631,3.12350995437311,1.07711698866399,0.238968797952552,0.445597348164788,0.849229592366497,0.809621403349789,1.75353514746787,1.58115111178609,3.85585579706168,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,1.06949213515416,0.632073515871632,0,0,3.74483566329167,0,0.129358683782755,0.857348140126369,1.77340233642274,3.21063871683727,2.96188237083818,4.87143918583359,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,7.97328798645192,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0,0.129614973291793,0,0,0,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0.386379188064381,0,0,0,0,10.7302850097243,9.66682996665071,10.8850147553485,8.42080593484069,9.59115527678899,9.82012066606611,5.40018000185445,13.9599572999508,9.5159905886683,11.9084871702919,0.726511433089237,1.59609949360412,2.04880326904961,2.18796045361465,1.67690530102386,2.20612210140017,2.889207461421,2.47242068686673,2.88827288632634,2.52697211763797,2.28131369901216,3.2066478035633,1.68554713445788,2.24088033417042,1.95280594449085,1.90517476513229,2.78122382267653,1.35036454324594,1.64834360321323,2.50238164228475,3.42869252385415,1.95223386775271,1.43061713968393,2.61623549938191,2.72917203204459,1.77690676572521,2.19513567447327,2.10455769150274,1.35804113845862,3.36685362994643,2.60997039873183,2.26560309463796,1.63692417267876,2.47898945897546,2.12197272079256,6.99469618226249,2.57324769289949,1.93383948643468,2.10417165275728,0.882365676478062,0.463735671240843 | |||
|short_description=p2@Vstm2l | |||
}} |
Revision as of 10:05, 4 August 2015
Short description: | p2@Vstm2l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vstm2l_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 7bp_to_ENSMUST00000109523, NM_198627, uc012cic.1_5end |
EntrezGene: | 277432 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.97e-17 | 23 |
neuroblast (sensu Vertebrata) | 5.97e-17 | 23 |
neuron | 1.23e-14 | 33 |
neuronal stem cell | 1.23e-14 | 33 |
neuroblast | 1.23e-14 | 33 |
electrically signaling cell | 1.23e-14 | 33 |
electrically responsive cell | 5.22e-11 | 39 |
electrically active cell | 5.22e-11 | 39 |
neural cell | 3.38e-09 | 43 |
ectodermal cell | 8.40e-09 | 44 |
neurectodermal cell | 8.40e-09 | 44 |