FFCP PHASE1:Mm9::chr4:137573229..137573260,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=353|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:137573229..137573260,+|id=chr4:137573229..137573260,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002611,4.53e-14,2;CL:0000117,4.59e-13,23;CL:0000337,4.59e-13,23;CL:0002612,1.21e-09,3;CL:0002614,4.24e-09,3;CL:0000540,6.18e-09,33;CL:0000047,6.18e-09,33;CL:0000031,6.18e-09,33;CL:0000404,6.18e-09,33;CL:0000393,1.81e-07,39;CL:0000211,1.81e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!3.98e-09!6;UBERON:0005174!3.98e-09!6;UBERON:0001137!3.98e-09!6;UBERON:0002298!9.49e-09!6;UBERON:0003076!1.42e-08!12;UBERON:0003057!1.42e-08!12;UBERON:0001948!8.59e-08!5;UBERON:0002315!8.59e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.47e-27,6;UBERON:0005174,2.47e-27,6;UBERON:0001137,2.47e-27,6;UBERON:0003076,3.55e-26,12;UBERON:0003057,3.55e-26,12;UBERON:0001948,3.54e-21,5;UBERON:0002315,3.54e-21,5;UBERON:0002950,1.87e-14,4;UBERON:0001891,1.87e-14,4;UBERON:0009616,1.87e-14,4;UBERON:0010286,1.87e-14,4;UBERON:0002256,4.53e-14,2;UBERON:0001896,6.08e-14,2;UBERON:0002298,6.08e-14,2;UBERON:0005290,6.08e-14,2;UBERON:0010096,6.08e-14,2;UBERON:0001049,1.14e-13,52;UBERON:0005068,1.14e-13,52;UBERON:0006241,1.14e-13,52;UBERON:0007135,1.14e-13,52;UBERON:0000073,4.97e-13,54;UBERON:0001017,2.72e-11,73;UBERON:0001016,5.91e-11,75;UBERON:0002346,7.13e-11,64;UBERON:0003075,7.13e-11,64;UBERON:0007284,7.13e-11,64;UBERON:0002257,1.21e-09,3;UBERON:0010371,2.26e-09,73;UBERON:0002038,4.24e-09,3;UBERON:0009663,4.24e-09,3;UBERON:0009661,4.24e-09,3;UBERON:0000125,4.24e-09,3;UBERON:0002308,4.24e-09,3;UBERON:0004121,2.39e-08,95;UBERON:0000924,2.39e-08,95;UBERON:0006601,2.39e-08,95;UBERON:0000489,8.85e-08,21;UBERON:0002259,1.53e-07,1;UBERON:0002314,1.53e-07,1;UBERON:0004061,1.53e-07,1;UBERON:0006777,1.53e-07,1;UBERON:0005882,1.53e-07,1;UBERON:0010314,3.69e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71213346972932,4.8591079009355,0,0,0,3.30347642998166,0.510749352340751,0.46081959976873,0,0,0,2.79182999001381,1.12552522006336,0.45839474333043,5.59794312399969,5.41012387036591,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,2.84602214869163,0.457500602818626,0,0.347648640384553,0.511430914660661,1.0389402227978,0,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61927064957272,3.8679856575427,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,11.6817940266621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0.900642406448441,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.280924522409647,0.640251524048693,0.17230640686684,0,0.463537303779422,0,0,0.883193520806384,1.02860775715625,0.177475806159338,0.238436189947321,0.145346416632329,0.658765662907314,0.169229215783353,0.73171189149109,1.31534855718921,0.271608227691724,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0.956441660344217,0,0|short_description=p@chr4:137573229..137573260,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=353 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:137573229..137573260,+ | |||
|description=CAGE_peak_at_chr4:137573229..137573260,+ | |||
|id=chr4:137573229..137573260,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,4.53e-14,2;CL:0000117,4.59e-13,23;CL:0000337,4.59e-13,23;CL:0002612,1.21e-09,3;CL:0002614,4.24e-09,3;CL:0000540,6.18e-09,33;CL:0000047,6.18e-09,33;CL:0000031,6.18e-09,33;CL:0000404,6.18e-09,33;CL:0000393,1.81e-07,39;CL:0000211,1.81e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!3.98e-09!6;UBERON:0005174!3.98e-09!6;UBERON:0001137!3.98e-09!6;UBERON:0002298!9.49e-09!6;UBERON:0003076!1.42e-08!12;UBERON:0003057!1.42e-08!12;UBERON:0001948!8.59e-08!5;UBERON:0002315!8.59e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.47e-27,6;UBERON:0005174,2.47e-27,6;UBERON:0001137,2.47e-27,6;UBERON:0003076,3.55e-26,12;UBERON:0003057,3.55e-26,12;UBERON:0001948,3.54e-21,5;UBERON:0002315,3.54e-21,5;UBERON:0002950,1.87e-14,4;UBERON:0001891,1.87e-14,4;UBERON:0009616,1.87e-14,4;UBERON:0010286,1.87e-14,4;UBERON:0002256,4.53e-14,2;UBERON:0001896,6.08e-14,2;UBERON:0002298,6.08e-14,2;UBERON:0005290,6.08e-14,2;UBERON:0010096,6.08e-14,2;UBERON:0001049,1.14e-13,52;UBERON:0005068,1.14e-13,52;UBERON:0006241,1.14e-13,52;UBERON:0007135,1.14e-13,52;UBERON:0000073,4.97e-13,54;UBERON:0001017,2.72e-11,73;UBERON:0001016,5.91e-11,75;UBERON:0002346,7.13e-11,64;UBERON:0003075,7.13e-11,64;UBERON:0007284,7.13e-11,64;UBERON:0002257,1.21e-09,3;UBERON:0010371,2.26e-09,73;UBERON:0002038,4.24e-09,3;UBERON:0009663,4.24e-09,3;UBERON:0009661,4.24e-09,3;UBERON:0000125,4.24e-09,3;UBERON:0002308,4.24e-09,3;UBERON:0004121,2.39e-08,95;UBERON:0000924,2.39e-08,95;UBERON:0006601,2.39e-08,95;UBERON:0000489,8.85e-08,21;UBERON:0002259,1.53e-07,1;UBERON:0002314,1.53e-07,1;UBERON:0004061,1.53e-07,1;UBERON:0006777,1.53e-07,1;UBERON:0005882,1.53e-07,1;UBERON:0010314,3.69e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71213346972932,4.8591079009355,0,0,0,3.30347642998166,0.510749352340751,0.46081959976873,0,0,0,2.79182999001381,1.12552522006336,0.45839474333043,5.59794312399969,5.41012387036591,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,2.84602214869163,0.457500602818626,0,0.347648640384553,0.511430914660661,1.0389402227978,0,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61927064957272,3.8679856575427,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,11.6817940266621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0.900642406448441,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.280924522409647,0.640251524048693,0.17230640686684,0,0.463537303779422,0,0,0.883193520806384,1.02860775715625,0.177475806159338,0.238436189947321,0.145346416632329,0.658765662907314,0.169229215783353,0.73171189149109,1.31534855718921,0.271608227691724,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0.956441660344217,0,0 | |||
|short_description=p@chr4:137573229..137573260,+ | |||
}} |
Latest revision as of 00:41, 5 August 2015
Short description: | p@chr4:137573229..137573260, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:137573229..137573260, + |
Coexpression cluster: | MCL_coexpression_mm9:353 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 4.53e-14 | 2 |
CNS neuron (sensu Vertebrata) | 4.59e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.59e-13 | 23 |
neuron of the ventral spinal cord | 1.21e-09 | 3 |
neuron of the substantia nigra | 4.24e-09 | 3 |
neuron | 6.18e-09 | 33 |
neuronal stem cell | 6.18e-09 | 33 |
neuroblast | 6.18e-09 | 33 |
electrically signaling cell | 6.18e-09 | 33 |
electrically responsive cell | 1.81e-07 | 39 |
electrically active cell | 1.81e-07 | 39 |