FFCP PHASE1:Mm9::chr5:34873297..34873300,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=1020|UniProt=|association_with_transcript=0bp_to_ENSMUST00000157707_5end|description=CAGE_peak_1_at_ENSMUST00000157707_5end|id=chr5:34873297..34873300,+|ontology_enrichment_celltype=CL:0000548!9.49e-41!115;CL:0000004!9.49e-41!115;CL:0000255!9.49e-41!115;CL:0000144!2.95e-40!121;CL:0000012!2.95e-40!121;CL:0002371!4.90e-40!118;CL:0000034!1.88e-37!97;CL:0000723!1.05e-35!91;CL:0000048!1.05e-35!91;CL:0002321!3.41e-28!70;CL:0000220!3.41e-28!70;CL:0000055!3.98e-28!50;CL:0000221!2.04e-26!44;CL:0000133!2.04e-26!44;CL:0002319!2.53e-26!43;CL:0000393!2.77e-21!39;CL:0000211!2.77e-21!39;CL:0000540!4.11e-20!33;CL:0000047!4.11e-20!33;CL:0000031!4.11e-20!33;CL:0000404!4.11e-20!33;CL:0000219!5.15e-17!54;CL:0000117!1.78e-16!23;CL:0000337!1.78e-16!23;CL:0002320!8.29e-13!46;CL:0000134!8.29e-13!46;CL:0000063!4.43e-11!66;CL:0000049!3.75e-07!19;CL:0000988!5.30e-07!32;CL:0002032!5.30e-07!32;CL:0000037!5.30e-07!32;CL:0000566!5.30e-07!32;CL:0000837!5.30e-07!32;CL:0000333!5.81e-07!10;CL:0000095!5.81e-07!10;CL:0000243!5.81e-07!10;CL:0000123!5.81e-07!10;CL:0000125!5.81e-07!10;CL:0000030!5.81e-07!10;CL:0000339!5.81e-07!10;CL:0002453!6.44e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,1.20e-32,43;CL:0000221,1.15e-31,44;CL:0000133,1.15e-31,44;CL:0002321,5.70e-28,70;CL:0000117,3.24e-26,23;CL:0000337,3.24e-26,23;CL:0000540,3.36e-25,33;CL:0000047,3.36e-25,33;CL:0000031,3.36e-25,33;CL:0000404,3.36e-25,33;CL:0000393,3.80e-24,39;CL:0000211,3.80e-24,39;CL:0000723,1.30e-23,91;CL:0000048,1.30e-23,91;CL:0000034,1.90e-22,97;CL:0002453,2.03e-10,8;CL:0000219,1.11e-08,54;CL:0000128,5.19e-08,6;CL:0000126,5.19e-08,6;CL:0000127,5.19e-08,6;CL:0000333,5.30e-08,10;CL:0000095,5.30e-08,10;CL:0000243,5.30e-08,10;CL:0000123,5.30e-08,10;CL:0000125,5.30e-08,10;CL:0000030,5.30e-08,10;CL:0000339,5.30e-08,10;CL:0002609,1.88e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.19e-20!75;UBERON:0001016!1.19e-20!75;UBERON:0001017!3.46e-20!73;UBERON:0005743!3.46e-20!73;UBERON:0002020!3.21e-17!34;UBERON:0002791!1.16e-13!29;UBERON:0003528!1.16e-13!29;UBERON:0001893!1.16e-13!29;UBERON:0002384!8.29e-13!46;UBERON:0004121!1.32e-12!102;UBERON:0000924!1.32e-12!102;UBERON:0006601!1.32e-12!102;UBERON:0000956!1.48e-11!21;UBERON:0001869!1.48e-11!21;UBERON:0000203!1.48e-11!21;UBERON:0001049!2.46e-10!52;UBERON:0005068!2.46e-10!52;UBERON:0006241!2.46e-10!52;UBERON:0007135!2.46e-10!52;UBERON:0002619!8.16e-10!17;UBERON:0002616!1.59e-09!49;UBERON:0000955!4.09e-09!50;UBERON:0006238!4.09e-09!50;UBERON:0002021!1.43e-08!10;UBERON:0000411!1.43e-08!10;UBERON:0001950!1.43e-08!10;UBERON:0002780!2.18e-08!39;UBERON:0001890!2.18e-08!39;UBERON:0006240!2.18e-08!39;UBERON:0003080!5.91e-08!40;UBERON:0002346!1.11e-07!71;UBERON:0003075!1.11e-07!71;UBERON:0007284!1.11e-07!71;UBERON:0002371!1.94e-07!16;UBERON:0000033!7.34e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-29,73;UBERON:0001016,1.78e-28,75;UBERON:0002020,1.16e-27,34;UBERON:0003528,9.40e-22,29;UBERON:0002791,9.40e-22,29;UBERON:0001893,9.40e-22,29;UBERON:0000073,3.13e-21,54;UBERON:0004121,7.99e-20,95;UBERON:0000924,7.99e-20,95;UBERON:0006601,7.99e-20,95;UBERON:0001049,7.33e-18,52;UBERON:0005068,7.33e-18,52;UBERON:0006241,7.33e-18,52;UBERON:0007135,7.33e-18,52;UBERON:0000956,1.66e-17,21;UBERON:0001869,1.66e-17,21;UBERON:0000203,1.66e-17,21;UBERON:0002619,5.51e-16,17;UBERON:0002346,4.28e-15,64;UBERON:0003075,4.28e-15,64;UBERON:0007284,4.28e-15,64;UBERON:0002780,2.11e-14,39;UBERON:0001890,2.11e-14,39;UBERON:0006240,2.11e-14,39;UBERON:0003080,7.13e-14,40;UBERON:0002616,1.24e-13,46;UBERON:0000955,3.44e-13,47;UBERON:0006238,3.44e-13,47;UBERON:0002021,3.87e-13,10;UBERON:0000411,3.87e-13,10;UBERON:0001950,3.87e-13,10;UBERON:0010371,4.00e-12,73;UBERON:0003056,3.99e-10,49;UBERON:0010314,1.42e-09,92;UBERON:0001948,3.07e-07,5;UBERON:0002315,3.07e-07,5;UBERON:0000025,5.78e-07,114;UBERON:0011216,6.92e-07,194|phase1_expression=0,0,0,0.30246421130683,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.34243593645101,0.0797721589953364,0.513602189793617,0.0874204024189974,1.99865857089398,0,2.09868563438444,0.473193248037357,0.137114433605739,0.84877930359606,0,0,0,0,0,0,0,0,0.190023419456374,0,0,17.14582818341,26.4477858661365,0,0.577703239502549,0.498703936075477,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,2.61630187656536,1.97717564461025,4.27745777963423,2.37976916763116,7.18762821824858,0.167782606057736,0,0.336093799142464,0.514518872071894,3.72493471920384,11.8604581223812,2.02316460859598,2.64495489636016,16.4796164911607,2.37191172448392,5.33576877666684,3.5995988691256,11.8663963508037,5.6838409195688,2.99600110518405,4.61061966385865,1.45165457231869,2.56511282830212,1.47227472945967,5.42736870367227,3.97563373712904,2.69479758272899,1.62937300731002,27.5765635983006,1.10115880999389,3.06449611404451,4.30098293117482,3.42904348098504,1.64677758484337,2.08365348222704,2.51264699101243,2.8138130501584,3.20876320331301,3.24091444021034,4.55589378557129,1.3047961207771,0.151452386666368,0.151143120213571,0.579728977403356,0.860423876981386,0,7.01614149129162,7.14754059192436,5.37632264516803,0,0,0.779358013808606,1.06001872353102,0.14084341977668,0,2.54805239706646,0,0.649473123033642,1.01343946190039,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.718890747035522,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0.43839146485515,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0791283939272,2.71952841909355,0,0.275936746304732,0,0,0,0,1.57754109708128,0.780877488593277,2.80050417052639,2.15071918157297,1.78238939265915,2.26461224631066,0.809621403349789,0.876767573733936,0.790575555893047,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0.201932899896295,0,0,0,0.0962118416403295,0,0,1.33191572024439,0.448569283047378,0.839423081820392,0,0,0,0,0,5.64751842617067,4.60325236507177,7.44764167471216,5.84300819968538,5.48066015816514,1.5107877947794,4.05013500139084,3.15224842256954,1.35942722695261,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p1@ENSMUST00000157707}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=1020 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000157707_5end | |||
|cluster_id=chr5:34873297..34873300,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000157707_5end | |||
|id=chr5:34873297..34873300,+ | |||
|ontology_enrichment_celltype=CL:0000548!9.49e-41!115;CL:0000004!9.49e-41!115;CL:0000255!9.49e-41!115;CL:0000144!2.95e-40!121;CL:0000012!2.95e-40!121;CL:0002371!4.90e-40!118;CL:0000034!1.88e-37!97;CL:0000723!1.05e-35!91;CL:0000048!1.05e-35!91;CL:0002321!3.41e-28!70;CL:0000220!3.41e-28!70;CL:0000055!3.98e-28!50;CL:0000221!2.04e-26!44;CL:0000133!2.04e-26!44;CL:0002319!2.53e-26!43;CL:0000393!2.77e-21!39;CL:0000211!2.77e-21!39;CL:0000540!4.11e-20!33;CL:0000047!4.11e-20!33;CL:0000031!4.11e-20!33;CL:0000404!4.11e-20!33;CL:0000219!5.15e-17!54;CL:0000117!1.78e-16!23;CL:0000337!1.78e-16!23;CL:0002320!8.29e-13!46;CL:0000134!8.29e-13!46;CL:0000063!4.43e-11!66;CL:0000049!3.75e-07!19;CL:0000988!5.30e-07!32;CL:0002032!5.30e-07!32;CL:0000037!5.30e-07!32;CL:0000566!5.30e-07!32;CL:0000837!5.30e-07!32;CL:0000333!5.81e-07!10;CL:0000095!5.81e-07!10;CL:0000243!5.81e-07!10;CL:0000123!5.81e-07!10;CL:0000125!5.81e-07!10;CL:0000030!5.81e-07!10;CL:0000339!5.81e-07!10;CL:0002453!6.44e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.20e-32,43;CL:0000221,1.15e-31,44;CL:0000133,1.15e-31,44;CL:0002321,5.70e-28,70;CL:0000117,3.24e-26,23;CL:0000337,3.24e-26,23;CL:0000540,3.36e-25,33;CL:0000047,3.36e-25,33;CL:0000031,3.36e-25,33;CL:0000404,3.36e-25,33;CL:0000393,3.80e-24,39;CL:0000211,3.80e-24,39;CL:0000723,1.30e-23,91;CL:0000048,1.30e-23,91;CL:0000034,1.90e-22,97;CL:0002453,2.03e-10,8;CL:0000219,1.11e-08,54;CL:0000128,5.19e-08,6;CL:0000126,5.19e-08,6;CL:0000127,5.19e-08,6;CL:0000333,5.30e-08,10;CL:0000095,5.30e-08,10;CL:0000243,5.30e-08,10;CL:0000123,5.30e-08,10;CL:0000125,5.30e-08,10;CL:0000030,5.30e-08,10;CL:0000339,5.30e-08,10;CL:0002609,1.88e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.19e-20!75;UBERON:0001016!1.19e-20!75;UBERON:0001017!3.46e-20!73;UBERON:0005743!3.46e-20!73;UBERON:0002020!3.21e-17!34;UBERON:0002791!1.16e-13!29;UBERON:0003528!1.16e-13!29;UBERON:0001893!1.16e-13!29;UBERON:0002384!8.29e-13!46;UBERON:0004121!1.32e-12!102;UBERON:0000924!1.32e-12!102;UBERON:0006601!1.32e-12!102;UBERON:0000956!1.48e-11!21;UBERON:0001869!1.48e-11!21;UBERON:0000203!1.48e-11!21;UBERON:0001049!2.46e-10!52;UBERON:0005068!2.46e-10!52;UBERON:0006241!2.46e-10!52;UBERON:0007135!2.46e-10!52;UBERON:0002619!8.16e-10!17;UBERON:0002616!1.59e-09!49;UBERON:0000955!4.09e-09!50;UBERON:0006238!4.09e-09!50;UBERON:0002021!1.43e-08!10;UBERON:0000411!1.43e-08!10;UBERON:0001950!1.43e-08!10;UBERON:0002780!2.18e-08!39;UBERON:0001890!2.18e-08!39;UBERON:0006240!2.18e-08!39;UBERON:0003080!5.91e-08!40;UBERON:0002346!1.11e-07!71;UBERON:0003075!1.11e-07!71;UBERON:0007284!1.11e-07!71;UBERON:0002371!1.94e-07!16;UBERON:0000033!7.34e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-29,73;UBERON:0001016,1.78e-28,75;UBERON:0002020,1.16e-27,34;UBERON:0003528,9.40e-22,29;UBERON:0002791,9.40e-22,29;UBERON:0001893,9.40e-22,29;UBERON:0000073,3.13e-21,54;UBERON:0004121,7.99e-20,95;UBERON:0000924,7.99e-20,95;UBERON:0006601,7.99e-20,95;UBERON:0001049,7.33e-18,52;UBERON:0005068,7.33e-18,52;UBERON:0006241,7.33e-18,52;UBERON:0007135,7.33e-18,52;UBERON:0000956,1.66e-17,21;UBERON:0001869,1.66e-17,21;UBERON:0000203,1.66e-17,21;UBERON:0002619,5.51e-16,17;UBERON:0002346,4.28e-15,64;UBERON:0003075,4.28e-15,64;UBERON:0007284,4.28e-15,64;UBERON:0002780,2.11e-14,39;UBERON:0001890,2.11e-14,39;UBERON:0006240,2.11e-14,39;UBERON:0003080,7.13e-14,40;UBERON:0002616,1.24e-13,46;UBERON:0000955,3.44e-13,47;UBERON:0006238,3.44e-13,47;UBERON:0002021,3.87e-13,10;UBERON:0000411,3.87e-13,10;UBERON:0001950,3.87e-13,10;UBERON:0010371,4.00e-12,73;UBERON:0003056,3.99e-10,49;UBERON:0010314,1.42e-09,92;UBERON:0001948,3.07e-07,5;UBERON:0002315,3.07e-07,5;UBERON:0000025,5.78e-07,114;UBERON:0011216,6.92e-07,194 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.34243593645101,0.0797721589953364,0.513602189793617,0.0874204024189974,1.99865857089398,0,2.09868563438444,0.473193248037357,0.137114433605739,0.84877930359606,0,0,0,0,0,0,0,0,0.190023419456374,0,0,17.14582818341,26.4477858661365,0,0.577703239502549,0.498703936075477,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,2.61630187656536,1.97717564461025,4.27745777963423,2.37976916763116,7.18762821824858,0.167782606057736,0,0.336093799142464,0.514518872071894,3.72493471920384,11.8604581223812,2.02316460859598,2.64495489636016,16.4796164911607,2.37191172448392,5.33576877666684,3.5995988691256,11.8663963508037,5.6838409195688,2.99600110518405,4.61061966385865,1.45165457231869,2.56511282830212,1.47227472945967,5.42736870367227,3.97563373712904,2.69479758272899,1.62937300731002,27.5765635983006,1.10115880999389,3.06449611404451,4.30098293117482,3.42904348098504,1.64677758484337,2.08365348222704,2.51264699101243,2.8138130501584,3.20876320331301,3.24091444021034,4.55589378557129,1.3047961207771,0.151452386666368,0.151143120213571,0.579728977403356,0.860423876981386,0,7.01614149129162,7.14754059192436,5.37632264516803,0,0,0.779358013808606,1.06001872353102,0.14084341977668,0,2.54805239706646,0,0.649473123033642,1.01343946190039,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.718890747035522,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0.43839146485515,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0791283939272,2.71952841909355,0,0.275936746304732,0,0,0,0,1.57754109708128,0.780877488593277,2.80050417052639,2.15071918157297,1.78238939265915,2.26461224631066,0.809621403349789,0.876767573733936,0.790575555893047,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0.201932899896295,0,0,0,0.0962118416403295,0,0,1.33191572024439,0.448569283047378,0.839423081820392,0,0,0,0,0,5.64751842617067,4.60325236507177,7.44764167471216,5.84300819968538,5.48066015816514,1.5107877947794,4.05013500139084,3.15224842256954,1.35942722695261,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p1@ENSMUST00000157707 | |||
}} |
Latest revision as of 08:28, 4 August 2015
Short description: | p1@ENSMUST00000157707 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000157707_5end |
Coexpression cluster: | MCL_coexpression_mm9:1020 |
Association with transcript: | 0bp_to_ENSMUST00000157707_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.20e-32 | 43 |
ectodermal cell | 1.15e-31 | 44 |
neurectodermal cell | 1.15e-31 | 44 |
embryonic cell | 5.70e-28 | 70 |
CNS neuron (sensu Vertebrata) | 3.24e-26 | 23 |
neuroblast (sensu Vertebrata) | 3.24e-26 | 23 |
neuron | 3.36e-25 | 33 |
neuronal stem cell | 3.36e-25 | 33 |
neuroblast | 3.36e-25 | 33 |
electrically signaling cell | 3.36e-25 | 33 |
electrically responsive cell | 3.80e-24 | 39 |
electrically active cell | 3.80e-24 | 39 |
somatic stem cell | 1.30e-23 | 91 |
multi fate stem cell | 1.30e-23 | 91 |
stem cell | 1.90e-22 | 97 |
oligodendrocyte precursor cell | 2.03e-10 | 8 |
motile cell | 1.11e-08 | 54 |
oligodendrocyte | 5.19e-08 | 6 |
macroglial cell | 5.19e-08 | 6 |
astrocyte | 5.19e-08 | 6 |
migratory neural crest cell | 5.30e-08 | 10 |
neuron associated cell | 5.30e-08 | 10 |
glial cell (sensu Vertebrata) | 5.30e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 5.30e-08 | 10 |
glial cell | 5.30e-08 | 10 |
glioblast | 5.30e-08 | 10 |
glioblast (sensu Vertebrata) | 5.30e-08 | 10 |
neuron of cerebral cortex | 1.88e-07 | 6 |