FFCP PHASE1:Mm9::chr5:9725794..9725862,-: Difference between revisions
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{{FFCP|EntrezGene=108069|HGNC=|MCL_coexpression_id=2|UniProt=Q9QYS2|association_with_transcript=-442bp_to_ENSMUST00000004076,NM_181850,uc008wll.1_5end|description=CAGE_peak_1_at_Grm3_5end|id=chr5:9725794..9725862,-|ontology_enrichment_celltype=CL:0000117!9.61e-15!23;CL:0000337!9.61e-15!23;CL:0000540!4.82e-09!33;CL:0000047!4.82e-09!33;CL:0000031!4.82e-09!33;CL:0000404!4.82e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-17,23;CL:0000337,2.53e-17,23;CL:0000540,3.47e-10,33;CL:0000047,3.47e-10,33;CL:0000031,3.47e-10,33;CL:0000404,3.47e-10,33;CL:0000393,9.76e-08,39;CL:0000211,9.76e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.23e-23!52;UBERON:0005068!1.23e-23!52;UBERON:0006241!1.23e-23!52;UBERON:0007135!1.23e-23!52;UBERON:0002020!1.40e-22!34;UBERON:0000955!9.80e-22!50;UBERON:0006238!9.80e-22!50;UBERON:0000033!1.13e-21!63;UBERON:0002346!2.79e-21!71;UBERON:0003075!2.79e-21!71;UBERON:0007284!2.79e-21!71;UBERON:0002616!4.89e-21!49;UBERON:0001017!5.30e-21!73;UBERON:0005743!5.30e-21!73;UBERON:0000073!7.19e-20!75;UBERON:0001016!7.19e-20!75;UBERON:0003056!2.03e-18!49;UBERON:0002791!2.03e-18!29;UBERON:0003528!2.03e-18!29;UBERON:0001893!2.03e-18!29;UBERON:0003080!1.22e-16!40;UBERON:0004121!1.26e-16!102;UBERON:0000924!1.26e-16!102;UBERON:0006601!1.26e-16!102;UBERON:0002780!6.81e-16!39;UBERON:0001890!6.81e-16!39;UBERON:0006240!6.81e-16!39;UBERON:0000956!2.73e-13!21;UBERON:0001869!2.73e-13!21;UBERON:0000203!2.73e-13!21;UBERON:0002619!1.74e-11!17;UBERON:0007811!2.50e-11!86;UBERON:0000153!1.92e-10!94;UBERON:0002021!2.35e-10!10;UBERON:0000411!2.35e-10!10;UBERON:0001950!2.35e-10!10;UBERON:0003076!1.08e-07!12;UBERON:0003057!1.08e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.37e-29,54;UBERON:0002020,1.89e-27,34;UBERON:0001049,5.24e-27,52;UBERON:0005068,5.24e-27,52;UBERON:0006241,5.24e-27,52;UBERON:0007135,5.24e-27,52;UBERON:0001017,5.17e-25,73;UBERON:0001016,5.86e-24,75;UBERON:0002346,7.95e-22,64;UBERON:0003075,7.95e-22,64;UBERON:0007284,7.95e-22,64;UBERON:0003528,1.13e-21,29;UBERON:0002791,1.13e-21,29;UBERON:0001893,1.13e-21,29;UBERON:0000955,1.57e-21,47;UBERON:0006238,1.57e-21,47;UBERON:0002616,1.27e-20,46;UBERON:0003080,3.09e-18,40;UBERON:0004121,1.19e-17,95;UBERON:0000924,1.19e-17,95;UBERON:0006601,1.19e-17,95;UBERON:0010371,1.45e-17,73;UBERON:0002780,3.02e-17,39;UBERON:0001890,3.02e-17,39;UBERON:0006240,3.02e-17,39;UBERON:0003056,2.87e-15,49;UBERON:0002619,7.43e-15,17;UBERON:0000956,1.63e-14,21;UBERON:0001869,1.63e-14,21;UBERON:0000203,1.63e-14,21;UBERON:0002021,4.00e-14,10;UBERON:0000411,4.00e-14,10;UBERON:0001950,4.00e-14,10;UBERON:0010314,1.98e-11,92;UBERON:0003076,1.89e-09,12;UBERON:0003057,1.89e-09,12;UBERON:0002420,2.09e-08,8;UBERON:0007245,2.09e-08,8;UBERON:0010009,2.09e-08,8;UBERON:0010011,2.09e-08,8;UBERON:0000454,2.09e-08,8;UBERON:0002240,4.79e-08,6;UBERON:0005174,4.79e-08,6;UBERON:0001137,4.79e-08,6;UBERON:0001948,4.31e-07,5;UBERON:0002315,4.31e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,4.45096213891115,5.81890077199236,3.80298842103708,0,0,0,0,0,0,0,0.725827286159344,1.62007125998029,0.630974884054146,4.85606673486466,7.95126747425809,1.95985278743926,1.15014565221884,1.83843757322004,4.40463523997555,3.70293280447044,4.14737639791857,3.03338461779446,2.74462930807229,1.56274011167028,3.07101298901519,2.25105044012672,3.51435969886663,13.8475435172624,14.0947963991112,6.71038004971082,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,3.22058876712702,3.77004072264219,0,0,0,0,5.54225365797844,25.6200337578431,25.1308704225729,24.1615805067264,24.0372529890511,8.51930982694196,14.7639549391659,0.509196819251581,0,0,0.210441855886474,0,0.919608417733892,0.360124259610698,0.30140963567143,0.95251098811859,1.2811372028485,1.68663104207512,0.517406741478031,0,0,0.527853372491847,0,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,6.09840850835969,3.60166143327496,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,5.50894926983355,0,0,0,0,0,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0.322928853391811,0,0,0,0,3.8939313422207,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0.627264888043406,0.436725127492355,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,19.7663144915973,19.7939851698086,25.7802981047728,14.4356673168698,22.6077231524312,35.5035131773159,22.9507650078814,29.7211994127986,28.5479717660049,23.2992140288319,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,1.25767897576789,1.65459157605013,3.33370091702423,3.91466608753899,0.962757628775446,1.26348605881899,3.04175159868288,3.2066478035633,2.71560371662659,2.4969809437899,2.64203157195821,2.38146845641537,1.97003354106254,3.08654752741928,0.412085900803307,2.35518272215036,2.40008476669791,1.95223386775271,2.38436189947321,3.34296758254356,1.97629698872194,2.11536519729191,2.0122077016005,1.8414879800649,2.71608227691724,1.68342681497322,2.13543032623513,1.97008964751127,3.27384834535751,2.47898945897546,1.54325288784913,3.99696924700713,2.10538447600868,3.22306581072447,1.14772999241306,0.220591419119515,0.231867835620421|short_description=p1@Grm3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108069 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QYS2 | |||
|association_with_transcript=-442bp_to_ENSMUST00000004076,NM_181850,uc008wll.1_5end | |||
|cluster_id=chr5:9725794..9725862,- | |||
|description=CAGE_peak_1_at_Grm3_5end | |||
|id=chr5:9725794..9725862,- | |||
|ontology_enrichment_celltype=CL:0000117!9.61e-15!23;CL:0000337!9.61e-15!23;CL:0000540!4.82e-09!33;CL:0000047!4.82e-09!33;CL:0000031!4.82e-09!33;CL:0000404!4.82e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-17,23;CL:0000337,2.53e-17,23;CL:0000540,3.47e-10,33;CL:0000047,3.47e-10,33;CL:0000031,3.47e-10,33;CL:0000404,3.47e-10,33;CL:0000393,9.76e-08,39;CL:0000211,9.76e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.23e-23!52;UBERON:0005068!1.23e-23!52;UBERON:0006241!1.23e-23!52;UBERON:0007135!1.23e-23!52;UBERON:0002020!1.40e-22!34;UBERON:0000955!9.80e-22!50;UBERON:0006238!9.80e-22!50;UBERON:0000033!1.13e-21!63;UBERON:0002346!2.79e-21!71;UBERON:0003075!2.79e-21!71;UBERON:0007284!2.79e-21!71;UBERON:0002616!4.89e-21!49;UBERON:0001017!5.30e-21!73;UBERON:0005743!5.30e-21!73;UBERON:0000073!7.19e-20!75;UBERON:0001016!7.19e-20!75;UBERON:0003056!2.03e-18!49;UBERON:0002791!2.03e-18!29;UBERON:0003528!2.03e-18!29;UBERON:0001893!2.03e-18!29;UBERON:0003080!1.22e-16!40;UBERON:0004121!1.26e-16!102;UBERON:0000924!1.26e-16!102;UBERON:0006601!1.26e-16!102;UBERON:0002780!6.81e-16!39;UBERON:0001890!6.81e-16!39;UBERON:0006240!6.81e-16!39;UBERON:0000956!2.73e-13!21;UBERON:0001869!2.73e-13!21;UBERON:0000203!2.73e-13!21;UBERON:0002619!1.74e-11!17;UBERON:0007811!2.50e-11!86;UBERON:0000153!1.92e-10!94;UBERON:0002021!2.35e-10!10;UBERON:0000411!2.35e-10!10;UBERON:0001950!2.35e-10!10;UBERON:0003076!1.08e-07!12;UBERON:0003057!1.08e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.37e-29,54;UBERON:0002020,1.89e-27,34;UBERON:0001049,5.24e-27,52;UBERON:0005068,5.24e-27,52;UBERON:0006241,5.24e-27,52;UBERON:0007135,5.24e-27,52;UBERON:0001017,5.17e-25,73;UBERON:0001016,5.86e-24,75;UBERON:0002346,7.95e-22,64;UBERON:0003075,7.95e-22,64;UBERON:0007284,7.95e-22,64;UBERON:0003528,1.13e-21,29;UBERON:0002791,1.13e-21,29;UBERON:0001893,1.13e-21,29;UBERON:0000955,1.57e-21,47;UBERON:0006238,1.57e-21,47;UBERON:0002616,1.27e-20,46;UBERON:0003080,3.09e-18,40;UBERON:0004121,1.19e-17,95;UBERON:0000924,1.19e-17,95;UBERON:0006601,1.19e-17,95;UBERON:0010371,1.45e-17,73;UBERON:0002780,3.02e-17,39;UBERON:0001890,3.02e-17,39;UBERON:0006240,3.02e-17,39;UBERON:0003056,2.87e-15,49;UBERON:0002619,7.43e-15,17;UBERON:0000956,1.63e-14,21;UBERON:0001869,1.63e-14,21;UBERON:0000203,1.63e-14,21;UBERON:0002021,4.00e-14,10;UBERON:0000411,4.00e-14,10;UBERON:0001950,4.00e-14,10;UBERON:0010314,1.98e-11,92;UBERON:0003076,1.89e-09,12;UBERON:0003057,1.89e-09,12;UBERON:0002420,2.09e-08,8;UBERON:0007245,2.09e-08,8;UBERON:0010009,2.09e-08,8;UBERON:0010011,2.09e-08,8;UBERON:0000454,2.09e-08,8;UBERON:0002240,4.79e-08,6;UBERON:0005174,4.79e-08,6;UBERON:0001137,4.79e-08,6;UBERON:0001948,4.31e-07,5;UBERON:0002315,4.31e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,4.45096213891115,5.81890077199236,3.80298842103708,0,0,0,0,0,0,0,0.725827286159344,1.62007125998029,0.630974884054146,4.85606673486466,7.95126747425809,1.95985278743926,1.15014565221884,1.83843757322004,4.40463523997555,3.70293280447044,4.14737639791857,3.03338461779446,2.74462930807229,1.56274011167028,3.07101298901519,2.25105044012672,3.51435969886663,13.8475435172624,14.0947963991112,6.71038004971082,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,3.22058876712702,3.77004072264219,0,0,0,0,5.54225365797844,25.6200337578431,25.1308704225729,24.1615805067264,24.0372529890511,8.51930982694196,14.7639549391659,0.509196819251581,0,0,0.210441855886474,0,0.919608417733892,0.360124259610698,0.30140963567143,0.95251098811859,1.2811372028485,1.68663104207512,0.517406741478031,0,0,0.527853372491847,0,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,6.09840850835969,3.60166143327496,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,5.50894926983355,0,0,0,0,0,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0.322928853391811,0,0,0,0,3.8939313422207,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0.627264888043406,0.436725127492355,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,19.7663144915973,19.7939851698086,25.7802981047728,14.4356673168698,22.6077231524312,35.5035131773159,22.9507650078814,29.7211994127986,28.5479717660049,23.2992140288319,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,1.25767897576789,1.65459157605013,3.33370091702423,3.91466608753899,0.962757628775446,1.26348605881899,3.04175159868288,3.2066478035633,2.71560371662659,2.4969809437899,2.64203157195821,2.38146845641537,1.97003354106254,3.08654752741928,0.412085900803307,2.35518272215036,2.40008476669791,1.95223386775271,2.38436189947321,3.34296758254356,1.97629698872194,2.11536519729191,2.0122077016005,1.8414879800649,2.71608227691724,1.68342681497322,2.13543032623513,1.97008964751127,3.27384834535751,2.47898945897546,1.54325288784913,3.99696924700713,2.10538447600868,3.22306581072447,1.14772999241306,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Grm3 | |||
}} |
Revision as of 20:10, 4 August 2015
Short description: | p1@Grm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -442bp_to_ENSMUST00000004076, NM_181850, uc008wll.1_5end |
EntrezGene: | 108069 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.53e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-17 | 23 |
neuron | 3.47e-10 | 33 |
neuronal stem cell | 3.47e-10 | 33 |
neuroblast | 3.47e-10 | 33 |
electrically signaling cell | 3.47e-10 | 33 |
electrically responsive cell | 9.76e-08 | 39 |
electrically active cell | 9.76e-08 | 39 |