FFCP PHASE1:Mm9::chrX:35605706..35605718,-: Difference between revisions
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{{FFCP|EntrezGene=245386|HGNC=|MCL_coexpression_id=20|UniProt=A2A3Y5,Q8BHW5,A2A3Y6|association_with_transcript=-48bp_to_NM_172930,uc009szr.2,uc009szs.2_5end|description=CAGE_peak_3_at_Fam70a_5end|id=chrX:35605706..35605718,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,4.13e-15,3;CL:0000117,4.32e-15,23;CL:0000337,4.32e-15,23;CL:0000540,3.75e-10,33;CL:0000047,3.75e-10,33;CL:0000031,3.75e-10,33;CL:0000404,3.75e-10,33;CL:0002611,6.44e-10,2;CL:0000393,2.11e-08,39;CL:0000211,2.11e-08,39;CL:0002319,1.66e-07,43;CL:0000221,2.63e-07,44;CL:0000133,2.63e-07,44;CL:0002610,4.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.67e-08!71;UBERON:0003075!2.67e-08!71;UBERON:0007284!2.67e-08!71;UBERON:0002298!9.88e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002950,8.59e-20,4;UBERON:0001891,8.59e-20,4;UBERON:0009616,8.59e-20,4;UBERON:0010286,8.59e-20,4;UBERON:0003076,1.65e-18,12;UBERON:0003057,1.65e-18,12;UBERON:0000073,2.34e-17,54;UBERON:0001017,3.19e-16,73;UBERON:0001049,9.40e-16,52;UBERON:0005068,9.40e-16,52;UBERON:0006241,9.40e-16,52;UBERON:0007135,9.40e-16,52;UBERON:0001016,1.01e-15,75;UBERON:0002038,4.13e-15,3;UBERON:0009663,4.13e-15,3;UBERON:0009661,4.13e-15,3;UBERON:0000125,4.13e-15,3;UBERON:0002308,4.13e-15,3;UBERON:0002240,1.11e-12,6;UBERON:0005174,1.11e-12,6;UBERON:0001137,1.11e-12,6;UBERON:0002346,2.18e-12,64;UBERON:0003075,2.18e-12,64;UBERON:0007284,2.18e-12,64;UBERON:0004121,7.03e-12,95;UBERON:0000924,7.03e-12,95;UBERON:0006601,7.03e-12,95;UBERON:0001896,9.28e-11,2;UBERON:0002298,9.28e-11,2;UBERON:0005290,9.28e-11,2;UBERON:0010096,9.28e-11,2;UBERON:0010371,1.38e-10,73;UBERON:0002256,6.44e-10,2;UBERON:0002616,6.12e-09,46;UBERON:0000955,1.02e-08,47;UBERON:0006238,1.02e-08,47;UBERON:0001948,1.07e-08,5;UBERON:0002315,1.07e-08,5;UBERON:0010314,6.24e-08,92;UBERON:0004733,1.09e-07,6;UBERON:0004732,1.09e-07,6;UBERON:0002028,1.09e-07,6;UBERON:0007277,1.09e-07,6;UBERON:0004684,4.17e-07,3;UBERON:0002275,4.17e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,1.32521124570968,0,0,0,1.10115880999389,0.893811366596314,2.30409799884365,0.263772575460388,0.457438218012048,0,1.95428099300967,1.68828783009504,2.75036845998258,0.883885756421003,1.42371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,1.25668024088073,0,0,0,0,2.84602214869163,0.457500602818626,0.125654352112864,0.347648640384553,0,2.49345653471472,1.94689515681309,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.452114453507145,0.136072998302656,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.617068451549513,0,0.268273401399619,0.467061369468678,0.493679549740441,0.492502392237286,0.0810688095458557,0,0,0,1.05144974282064,0.205809224758569,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,0,0,0,0.379335801906163,0.456994050438915,0,0.407302655690628,0.387904974335251,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0.952174563544055,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.53211297973142,1.75817529888305,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.534196811001766,0.488660878060728,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0.913394847343798,0,0,0.220528398054962,0,0.484393280087717,0,0,0,0,4.45020724825223,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0,0.209718688851422,0.483168241652012,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0,0,0,0,0.192423683280659,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0.758091635291392,1.52087579934144,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,1.90517476513229,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0.474540072496697,0.197008964751127,0,0.77468420592983,0.578719832943424,0,0.701794825336225,0.429742108096597,0.191288332068843,0.441182838239031,0|short_description=p3@Fam70a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:245386 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A3Y5,uniprot:Q8BHW5,uniprot:A2A3Y6 | |||
|association_with_transcript=-48bp_to_NM_172930,uc009szr.2,uc009szs.2_5end | |||
|cluster_id=chrX:35605706..35605718,- | |||
|description=CAGE_peak_3_at_Fam70a_5end | |||
|id=chrX:35605706..35605718,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,4.13e-15,3;CL:0000117,4.32e-15,23;CL:0000337,4.32e-15,23;CL:0000540,3.75e-10,33;CL:0000047,3.75e-10,33;CL:0000031,3.75e-10,33;CL:0000404,3.75e-10,33;CL:0002611,6.44e-10,2;CL:0000393,2.11e-08,39;CL:0000211,2.11e-08,39;CL:0002319,1.66e-07,43;CL:0000221,2.63e-07,44;CL:0000133,2.63e-07,44;CL:0002610,4.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.67e-08!71;UBERON:0003075!2.67e-08!71;UBERON:0007284!2.67e-08!71;UBERON:0002298!9.88e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,8.59e-20,4;UBERON:0001891,8.59e-20,4;UBERON:0009616,8.59e-20,4;UBERON:0010286,8.59e-20,4;UBERON:0003076,1.65e-18,12;UBERON:0003057,1.65e-18,12;UBERON:0000073,2.34e-17,54;UBERON:0001017,3.19e-16,73;UBERON:0001049,9.40e-16,52;UBERON:0005068,9.40e-16,52;UBERON:0006241,9.40e-16,52;UBERON:0007135,9.40e-16,52;UBERON:0001016,1.01e-15,75;UBERON:0002038,4.13e-15,3;UBERON:0009663,4.13e-15,3;UBERON:0009661,4.13e-15,3;UBERON:0000125,4.13e-15,3;UBERON:0002308,4.13e-15,3;UBERON:0002240,1.11e-12,6;UBERON:0005174,1.11e-12,6;UBERON:0001137,1.11e-12,6;UBERON:0002346,2.18e-12,64;UBERON:0003075,2.18e-12,64;UBERON:0007284,2.18e-12,64;UBERON:0004121,7.03e-12,95;UBERON:0000924,7.03e-12,95;UBERON:0006601,7.03e-12,95;UBERON:0001896,9.28e-11,2;UBERON:0002298,9.28e-11,2;UBERON:0005290,9.28e-11,2;UBERON:0010096,9.28e-11,2;UBERON:0010371,1.38e-10,73;UBERON:0002256,6.44e-10,2;UBERON:0002616,6.12e-09,46;UBERON:0000955,1.02e-08,47;UBERON:0006238,1.02e-08,47;UBERON:0001948,1.07e-08,5;UBERON:0002315,1.07e-08,5;UBERON:0010314,6.24e-08,92;UBERON:0004733,1.09e-07,6;UBERON:0004732,1.09e-07,6;UBERON:0002028,1.09e-07,6;UBERON:0007277,1.09e-07,6;UBERON:0004684,4.17e-07,3;UBERON:0002275,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,1.32521124570968,0,0,0,1.10115880999389,0.893811366596314,2.30409799884365,0.263772575460388,0.457438218012048,0,1.95428099300967,1.68828783009504,2.75036845998258,0.883885756421003,1.42371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,1.25668024088073,0,0,0,0,2.84602214869163,0.457500602818626,0.125654352112864,0.347648640384553,0,2.49345653471472,1.94689515681309,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.452114453507145,0.136072998302656,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.617068451549513,0,0.268273401399619,0.467061369468678,0.493679549740441,0.492502392237286,0.0810688095458557,0,0,0,1.05144974282064,0.205809224758569,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0,0,0,0,0.379335801906163,0.456994050438915,0,0.407302655690628,0.387904974335251,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0.952174563544055,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.53211297973142,1.75817529888305,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.534196811001766,0.488660878060728,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0.913394847343798,0,0,0.220528398054962,0,0.484393280087717,0,0,0,0,4.45020724825223,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0,0.209718688851422,0.483168241652012,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0,0,0,0,0.192423683280659,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0.758091635291392,1.52087579934144,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,1.90517476513229,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0.474540072496697,0.197008964751127,0,0.77468420592983,0.578719832943424,0,0.701794825336225,0.429742108096597,0.191288332068843,0.441182838239031,0 | |||
|short_description=p3@Fam70a | |||
}} |
Revision as of 06:29, 6 August 2015
Short description: | p3@Fam70a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam70a_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -48bp_to_NM_172930, uc009szr.2, uc009szs.2_5end |
EntrezGene: | 245386 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 4.13e-15 | 3 |
CNS neuron (sensu Vertebrata) | 4.32e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.32e-15 | 23 |
neuron | 3.75e-10 | 33 |
neuronal stem cell | 3.75e-10 | 33 |
neuroblast | 3.75e-10 | 33 |
electrically signaling cell | 3.75e-10 | 33 |
neuron of the dorsal spinal cord | 6.44e-10 | 2 |
electrically responsive cell | 2.11e-08 | 39 |
electrically active cell | 2.11e-08 | 39 |
neural cell | 1.66e-07 | 43 |
ectodermal cell | 2.63e-07 | 44 |
neurectodermal cell | 2.63e-07 | 44 |
raphe nuclei neuron | 4.17e-07 | 3 |