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FFCP PHASE1:Mm9::chr4:91043006..91043021,-: Difference between revisions

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|id=chr4:91043006..91043021,-
|id=chr4:91043006..91043021,-
|ontology_enrichment_celltype=CL:0000117!1.40e-14!23;CL:0000337!1.40e-14!23;CL:0000540!1.59e-13!33;CL:0000047!1.59e-13!33;CL:0000031!1.59e-13!33;CL:0000404!1.59e-13!33;CL:0000393!3.84e-11!39;CL:0000211!3.84e-11!39;CL:0000221!8.04e-09!44;CL:0000133!8.04e-09!44;CL:0002319!9.26e-09!43;CL:0000055!4.53e-07!50
|ontology_enrichment_celltype=CL:0000117!1.40e-14!23;CL:0000337!1.40e-14!23;CL:0000540!1.59e-13!33;CL:0000047!1.59e-13!33;CL:0000031!1.59e-13!33;CL:0000404!1.59e-13!33;CL:0000393!3.84e-11!39;CL:0000211!3.84e-11!39;CL:0000221!8.04e-09!44;CL:0000133!8.04e-09!44;CL:0002319!9.26e-09!43;CL:0000055!4.53e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.46e-20,23;CL:0000337,7.46e-20,23;CL:0000540,1.39e-11,33;CL:0000047,1.39e-11,33;CL:0000031,1.39e-11,33;CL:0000404,1.39e-11,33;CL:0000393,9.55e-09,39;CL:0000211,9.55e-09,39;CL:0002319,2.48e-07,43;CL:0000221,5.05e-07,44;CL:0000133,5.05e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.42e-22!71;UBERON:0003075!3.42e-22!71;UBERON:0007284!3.42e-22!71;UBERON:0000073!8.07e-22!75;UBERON:0001016!8.07e-22!75;UBERON:0001017!2.63e-21!73;UBERON:0005743!2.63e-21!73;UBERON:0001049!1.04e-19!52;UBERON:0005068!1.04e-19!52;UBERON:0006241!1.04e-19!52;UBERON:0007135!1.04e-19!52;UBERON:0004121!5.30e-19!102;UBERON:0000924!5.30e-19!102;UBERON:0006601!5.30e-19!102;UBERON:0002020!1.26e-18!34;UBERON:0000955!2.21e-17!50;UBERON:0006238!2.21e-17!50;UBERON:0000033!3.20e-17!63;UBERON:0002616!6.79e-17!49;UBERON:0003056!1.70e-15!49;UBERON:0002791!1.45e-14!29;UBERON:0003528!1.45e-14!29;UBERON:0001893!1.45e-14!29;UBERON:0003080!2.07e-14!40;UBERON:0002780!7.60e-14!39;UBERON:0001890!7.60e-14!39;UBERON:0006240!7.60e-14!39;UBERON:0000956!1.38e-10!21;UBERON:0001869!1.38e-10!21;UBERON:0000203!1.38e-10!21;UBERON:0002619!1.88e-08!17;UBERON:0002021!4.58e-08!10;UBERON:0000411!4.58e-08!10;UBERON:0001950!4.58e-08!10;UBERON:0007811!3.30e-07!86
|ontology_enrichment_uberon=UBERON:0002346!3.42e-22!71;UBERON:0003075!3.42e-22!71;UBERON:0007284!3.42e-22!71;UBERON:0000073!8.07e-22!75;UBERON:0001016!8.07e-22!75;UBERON:0001017!2.63e-21!73;UBERON:0005743!2.63e-21!73;UBERON:0001049!1.04e-19!52;UBERON:0005068!1.04e-19!52;UBERON:0006241!1.04e-19!52;UBERON:0007135!1.04e-19!52;UBERON:0004121!5.30e-19!102;UBERON:0000924!5.30e-19!102;UBERON:0006601!5.30e-19!102;UBERON:0002020!1.26e-18!34;UBERON:0000955!2.21e-17!50;UBERON:0006238!2.21e-17!50;UBERON:0000033!3.20e-17!63;UBERON:0002616!6.79e-17!49;UBERON:0003056!1.70e-15!49;UBERON:0002791!1.45e-14!29;UBERON:0003528!1.45e-14!29;UBERON:0001893!1.45e-14!29;UBERON:0003080!2.07e-14!40;UBERON:0002780!7.60e-14!39;UBERON:0001890!7.60e-14!39;UBERON:0006240!7.60e-14!39;UBERON:0000956!1.38e-10!21;UBERON:0001869!1.38e-10!21;UBERON:0000203!1.38e-10!21;UBERON:0002619!1.88e-08!17;UBERON:0002021!4.58e-08!10;UBERON:0000411!4.58e-08!10;UBERON:0001950!4.58e-08!10;UBERON:0007811!3.30e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.57e-27,54;UBERON:0002020,6.53e-27,34;UBERON:0001049,1.65e-25,52;UBERON:0005068,1.65e-25,52;UBERON:0006241,1.65e-25,52;UBERON:0007135,1.65e-25,52;UBERON:0001017,7.61e-23,73;UBERON:0001016,8.03e-22,75;UBERON:0003528,8.72e-21,29;UBERON:0002791,8.72e-21,29;UBERON:0001893,8.72e-21,29;UBERON:0000955,1.70e-19,47;UBERON:0006238,1.70e-19,47;UBERON:0002616,8.33e-19,46;UBERON:0002346,3.35e-18,64;UBERON:0003075,3.35e-18,64;UBERON:0007284,3.35e-18,64;UBERON:0003080,4.11e-18,40;UBERON:0002780,2.71e-17,39;UBERON:0001890,2.71e-17,39;UBERON:0006240,2.71e-17,39;UBERON:0000956,8.78e-15,21;UBERON:0001869,8.78e-15,21;UBERON:0000203,8.78e-15,21;UBERON:0010371,2.29e-14,73;UBERON:0004121,4.57e-14,95;UBERON:0000924,4.57e-14,95;UBERON:0006601,4.57e-14,95;UBERON:0003056,5.64e-13,49;UBERON:0010314,2.31e-12,92;UBERON:0002619,1.42e-11,17;UBERON:0002021,2.17e-11,10;UBERON:0000411,2.17e-11,10;UBERON:0001950,2.17e-11,10;UBERON:0002240,8.43e-09,6;UBERON:0005174,8.43e-09,6;UBERON:0001137,8.43e-09,6;UBERON:0003076,5.41e-08,12;UBERON:0003057,5.41e-08,12;UBERON:0001948,1.41e-07,5;UBERON:0002315,1.41e-07,5;UBERON:0002420,3.56e-07,8;UBERON:0007245,3.56e-07,8;UBERON:0010009,3.56e-07,8;UBERON:0010011,3.56e-07,8;UBERON:0000454,3.56e-07,8
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,5.81890077199236,2.53532561402472,0,0,0,0,0,0,0,3.83651565541367,3.37514845829227,1.05162480675691,12.8542942981712,13.9147180799517,2.44981598429908,0.670918297127655,4.5960939330501,2.20231761998777,4.21368215681119,6.60508093001847,2.1101806036831,2.65314166446988,1.04182674111352,4.74611098302348,3.93933827022176,2.44477196442896,13.5529149317887,29.4709379254143,13.2343606535963,0.605809546665472,0.831287161174641,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,2.4287945747259,1.82679286987285,1.61430848079241,2.11011696773672,1.64624189989987,0,0,0.289198713839823,0,0,0,0,0,0.878342391034642,2.09446706813455,0,0,0,0,2.99581278809645,3.20250421973039,1.7591609295801,4.86708096538374,2.81287003063364,5.194701113989,3.24482526135515,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.900310649026746,0.452114453507145,0.544291993210623,0.768682321709099,0.374806898238915,0.517406741478031,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0,0,0,0,3.57492912559016,4.52780294468852,0.330418782983798,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0.667134131534611,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.913988100877831,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,8.99083303931635,7.61875962849321,0.327869890753351,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,2.24924921495265,0.283880170416537,0,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0,0,0,0.258428293168221,1.45413491791002,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.886701168211368,0.713475270408282,1.48094118541909,0,0,0,1.54369878638473,0,0,0,0,0,0,15.9465759729038,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.496375471371293,0.972255941720238,1.03327858782185,1.35164900392623,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0,0,0,0,3.3885110557024,6.90487854760765,6.87474616127276,3.60891682921744,4.11049511862385,3.0215755895588,3.37511250115903,6.75481804836331,4.98456649882625,3.62432218226274,2.38710899443606,6.78342284781753,2.56100408631201,1.94485373654635,4.40187641518763,4.04455718590031,1.55572709461131,2.88449080134452,2.24643446714271,2.27427490587418,1.77435509923168,3.58390048633545,2.06011316433741,1.6646539625266,1.66562859971278,0.952587382566147,2.20180219295225,3.08654752741928,1.23625770240992,1.61918812147837,2.74295401908332,1.77475806159337,1.90748951957857,2.61623549938191,1.88218760830661,2.5384382367503,0.914639864363863,2.36762740294059,2.44447404922551,2.80571135828869,1.42362021749009,1.77308068276014,0.818462086339379,2.16911577660352,1.92906610981141,0.999242311751784,0.701794825336225,1.71896843238639,1.72159498861959,1.10295709559758,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,5.81890077199236,2.53532561402472,0,0,0,0,0,0,0,3.83651565541367,3.37514845829227,1.05162480675691,12.8542942981712,13.9147180799517,2.44981598429908,0.670918297127655,4.5960939330501,2.20231761998777,4.21368215681119,6.60508093001847,2.1101806036831,2.65314166446988,1.04182674111352,4.74611098302348,3.93933827022176,2.44477196442896,13.5529149317887,29.4709379254143,13.2343606535963,0.605809546665472,0.831287161174641,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0,2.4287945747259,1.82679286987285,1.61430848079241,2.11011696773672,1.64624189989987,0,0,0.289198713839823,0,0,0,0,0,0.878342391034642,2.09446706813455,0,0,0,0,2.99581278809645,3.20250421973039,1.7591609295801,4.86708096538374,2.81287003063364,5.194701113989,3.24482526135515,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.900310649026746,0.452114453507145,0.544291993210623,0.768682321709099,0.374806898238915,0.517406741478031,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0,0,0,0,0,3.57492912559016,4.52780294468852,0.330418782983798,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0.667134131534611,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.913988100877831,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,8.99083303931635,7.61875962849321,0.327869890753351,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,2.24924921495265,0.283880170416537,0,0.488660878060728,0,0,0.242780636154981,0.604647113929502,0,0,0,0.258428293168221,1.45413491791002,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.886701168211368,0.713475270408282,1.48094118541909,0,0,0,1.54369878638473,0,0,0,0,0,0,15.9465759729038,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.496375471371293,0.972255941720238,1.03327858782185,1.35164900392623,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0,0,0,0,3.3885110557024,6.90487854760765,6.87474616127276,3.60891682921744,4.11049511862385,3.0215755895588,3.37511250115903,6.75481804836331,4.98456649882625,3.62432218226274,2.38710899443606,6.78342284781753,2.56100408631201,1.94485373654635,4.40187641518763,4.04455718590031,1.55572709461131,2.88449080134452,2.24643446714271,2.27427490587418,1.77435509923168,3.58390048633545,2.06011316433741,1.6646539625266,1.66562859971278,0.952587382566147,2.20180219295225,3.08654752741928,1.23625770240992,1.61918812147837,2.74295401908332,1.77475806159337,1.90748951957857,2.61623549938191,1.88218760830661,2.5384382367503,0.914639864363863,2.36762740294059,2.44447404922551,2.80571135828869,1.42362021749009,1.77308068276014,0.818462086339379,2.16911577660352,1.92906610981141,0.999242311751784,0.701794825336225,1.71896843238639,1.72159498861959,1.10295709559758,0.695603506861264
|short_description=p5@Elavl2
|short_description=p5@Elavl2
}}
}}

Revision as of 02:39, 14 November 2012

Short description:p5@Elavl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Elavl2_5end
Coexpression cluster:MCL_coexpression_mm9:2330
Association with transcript: 40bp_to_ENSMUST00000107124_5end
EntrezGene:Elavl2
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Elavl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.23
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A37.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.46e-2023
neuroblast (sensu Vertebrata)7.46e-2023
neuron1.39e-1133
neuronal stem cell1.39e-1133
neuroblast1.39e-1133
electrically signaling cell1.39e-1133
electrically responsive cell9.55e-0939
electrically active cell9.55e-0939
neural cell2.48e-0743
ectodermal cell5.05e-0744
neurectodermal cell5.05e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.57e-2754
gray matter6.53e-2734
neural tube1.65e-2552
neural rod1.65e-2552
future spinal cord1.65e-2552
neural keel1.65e-2552
central nervous system7.61e-2373
nervous system8.03e-2275
brain grey matter8.72e-2129
regional part of telencephalon8.72e-2129
telencephalon8.72e-2129
brain1.70e-1947
future brain1.70e-1947
regional part of brain8.33e-1946
neurectoderm3.35e-1864
neural plate3.35e-1864
presumptive neural plate3.35e-1864
anterior neural tube4.11e-1840
regional part of forebrain2.71e-1739
forebrain2.71e-1739
future forebrain2.71e-1739
cerebral cortex8.78e-1521
cerebral hemisphere8.78e-1521
pallium8.78e-1521
ecto-epithelium2.29e-1473
ectoderm-derived structure4.57e-1495
ectoderm4.57e-1495
presumptive ectoderm4.57e-1495
pre-chordal neural plate5.64e-1349
structure with developmental contribution from neural crest2.31e-1292
regional part of cerebral cortex1.42e-1117
occipital lobe2.17e-1110
visual cortex2.17e-1110
neocortex2.17e-1110
spinal cord8.43e-096
dorsal region element8.43e-096
dorsum8.43e-096
posterior neural tube5.41e-0812
chordal neural plate5.41e-0812
regional part of spinal cord1.41e-075
gray matter of spinal cord1.41e-075
basal ganglion3.56e-078
nuclear complex of neuraxis3.56e-078
aggregate regional part of brain3.56e-078
collection of basal ganglia3.56e-078
cerebral subcortex3.56e-078







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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