FFCP PHASE1:Mm9::chr13:88961548..88961581,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:88961548..88961581,+ | |id=chr13:88961548..88961581,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.11e-13!102;UBERON:0000924!1.11e-13!102;UBERON:0006601!1.11e-13!102;UBERON:0000073!4.60e-13!75;UBERON:0001016!4.60e-13!75;UBERON:0000033!5.39e-13!63;UBERON:0002346!9.49e-13!71;UBERON:0003075!9.49e-13!71;UBERON:0007284!9.49e-13!71;UBERON:0001017!2.49e-12!73;UBERON:0005743!2.49e-12!73;UBERON:0000955!5.40e-11!50;UBERON:0006238!5.40e-11!50;UBERON:0001049!5.82e-11!52;UBERON:0005068!5.82e-11!52;UBERON:0006241!5.82e-11!52;UBERON:0007135!5.82e-11!52;UBERON:0002616!1.68e-10!49;UBERON:0003056!2.14e-08!49;UBERON:0002048!9.00e-08!14;UBERON:0000117!9.00e-08!14;UBERON:0000171!9.00e-08!14;UBERON:0000170!9.00e-08!14;UBERON:0005597!9.00e-08!14;UBERON:0000118!9.00e-08!14;UBERON:0003080!5.18e-07!40 | |ontology_enrichment_uberon=UBERON:0004121!1.11e-13!102;UBERON:0000924!1.11e-13!102;UBERON:0006601!1.11e-13!102;UBERON:0000073!4.60e-13!75;UBERON:0001016!4.60e-13!75;UBERON:0000033!5.39e-13!63;UBERON:0002346!9.49e-13!71;UBERON:0003075!9.49e-13!71;UBERON:0007284!9.49e-13!71;UBERON:0001017!2.49e-12!73;UBERON:0005743!2.49e-12!73;UBERON:0000955!5.40e-11!50;UBERON:0006238!5.40e-11!50;UBERON:0001049!5.82e-11!52;UBERON:0005068!5.82e-11!52;UBERON:0006241!5.82e-11!52;UBERON:0007135!5.82e-11!52;UBERON:0002616!1.68e-10!49;UBERON:0003056!2.14e-08!49;UBERON:0002048!9.00e-08!14;UBERON:0000117!9.00e-08!14;UBERON:0000171!9.00e-08!14;UBERON:0000170!9.00e-08!14;UBERON:0005597!9.00e-08!14;UBERON:0000118!9.00e-08!14;UBERON:0003080!5.18e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.37e-13,14;UBERON:0000117,9.37e-13,14;UBERON:0000171,9.37e-13,14;UBERON:0000170,9.37e-13,14;UBERON:0005597,9.37e-13,14;UBERON:0000118,9.37e-13,14;UBERON:0000073,5.00e-12,54;UBERON:0001016,7.29e-12,75;UBERON:0001017,2.22e-11,73;UBERON:0001049,1.70e-10,52;UBERON:0005068,1.70e-10,52;UBERON:0006241,1.70e-10,52;UBERON:0007135,1.70e-10,52;UBERON:0005153,8.71e-10,17;UBERON:0005178,8.71e-10,17;UBERON:0005181,8.71e-10,17;UBERON:0002224,8.71e-10,17;UBERON:0000915,8.71e-10,17;UBERON:0008947,8.71e-10,17;UBERON:0003258,8.71e-10,17;UBERON:0000955,1.71e-09,47;UBERON:0006238,1.71e-09,47;UBERON:0004121,6.46e-09,95;UBERON:0000924,6.46e-09,95;UBERON:0006601,6.46e-09,95;UBERON:0002616,7.72e-09,46;UBERON:0002346,2.17e-08,64;UBERON:0003075,2.17e-08,64;UBERON:0007284,2.17e-08,64;UBERON:0000025,2.24e-08,114;UBERON:0005157,9.70e-08,20;UBERON:0004111,1.52e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,2.34717403304412,0,0,0,5.31948402176378,0,0,0,0,0,0,0,0,0,0.633831403506179,6.09920157724438,2.66788438833342,0,0,0,0,0,0.414758449233911,0.135005938331691,0.210324961351382,0.856952953211411,1.10434270475807,0.244981598429908,0,0.919218786610021,4.40463523997555,9.57655035638908,10.5988507946808,0.527545150920775,0.457438218012048,0,4.18774498502071,6.75315132038016,4.5839474333043,2.06240009831567,2.13557521198654,0.931997229126503,0.605809546665472,12.6204505378332,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,3.11728492036132,0,0.304465478312141,0.922461989024234,0.904335843315735,0.823120949949934,0.879666139307728,0,0.289198713839823,0,3.07357014900077,2.20841518460394,4.84875253135222,0,2.34224637609238,3.35114730901528,0.510914110417183,0.239630249011841,0,0.254140454146129,9.13722900369418,5.49000723382352,0.502617408451458,4.17178368461463,1.53429274398198,12.8828587626927,6.97637431191358,0,2.36373244159177,0.252722758433675,1.05220927943237,0.650602214813519,0.919608417733892,0.360124259610698,0.90422890701429,0.680364991513279,0.512454881139399,0.468508622798644,2.84573707812917,0,0,0.351902248327898,0.219195732427575,0.556094498451196,1.74126083261083,1.4404749548556,0.796137067273973,0.702213187313235,0,0,2.07125772535502,1.40715635988658,0.540186184383045,0.946978942340841,0.983821158737019,0.308534225774757,0.232533944750408,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.268412837520744,5.04695876553905,0.411618449517138,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.494096864172033,1.00534083520108,0.795825888164603,0.38992817423824,0,0,0,0.189667900953082,0.571242563048644,1.1270773567308,0.203651327845314,0,0.561086559122548,1.13825766823663,1.03327103585722,0,0.740382983530803,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,4.0645701836653,0,1.79261474086228,1.01847051465113,2.81628297946203,4.02015017860358,8.09348379012447,4.48807390072937,6.14777062014145,8.19419351700467,8.6105575075043,8.1931657357869,7.59813920209941,7.23245292907558,1.50791283939272,0,0,0,12.36239542906,10.6662634798905,0.983609672260053,0.252470927204373,0,0.390438744296638,0.646270193198397,0.955875191810208,0.891194696329576,1.13230612315533,1.61924280669958,2.33804686329049,0.395287777946524,3.85585579706168,0.141940085208269,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,7.48967132658334,0.900305470156551,0,1.28602221018955,1.24138163549592,0.891844088010353,0.658196082408484,0,1.40803024838226,0,0.441056796109924,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0,0,13.9068976507882,0,0,0.370389054739423,0,0,0,0.339956859987711,0.139951452323658,0,0.954670618015114,0,0.406638934253697,0.324016022465404,0,0.87345025498471,0,0.495920734352016,0.523511883968059,0.388844919875379,1.24267862617385,0,0.598066184175915,0.496375471371293,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0.920650473014354,2.86447756719698,1.3748254587495,4.11049511862385,2.2661816921691,3.37511250115903,0.45032120322422,2.71885445390523,4.14208249401456,0.31136204275253,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.919217542250071,1.33348036680969,0.412070114477788,0.962757628775446,0.505394423527595,1.01391719956096,2.26351609663291,0.561849044819294,0.89635213366817,0.746661096422973,0,0.231768651889711,1.15745532278223,0.412085900803307,0.883193520806384,2.40008476669791,0.354951612318675,1.1921809497366,0.581385666529314,1.12931256498397,0.592302255241736,1.64635175585495,1.05227884575137,0.814824683075171,0,0.711810108745045,0.394017929502254,0.409231043169689,1.70430525304563,1.15743966588685,0.499621155875892,1.87145286756327,0.644613162144895,1.14772999241306,1.32354851471709,1.85494268496337 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,2.34717403304412,0,0,0,5.31948402176378,0,0,0,0,0,0,0,0,0,0.633831403506179,6.09920157724438,2.66788438833342,0,0,0,0,0,0.414758449233911,0.135005938331691,0.210324961351382,0.856952953211411,1.10434270475807,0.244981598429908,0,0.919218786610021,4.40463523997555,9.57655035638908,10.5988507946808,0.527545150920775,0.457438218012048,0,4.18774498502071,6.75315132038016,4.5839474333043,2.06240009831567,2.13557521198654,0.931997229126503,0.605809546665472,12.6204505378332,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,3.11728492036132,0,0.304465478312141,0.922461989024234,0.904335843315735,0.823120949949934,0.879666139307728,0,0.289198713839823,0,3.07357014900077,2.20841518460394,4.84875253135222,0,2.34224637609238,3.35114730901528,0.510914110417183,0.239630249011841,0,0.254140454146129,9.13722900369418,5.49000723382352,0.502617408451458,4.17178368461463,1.53429274398198,12.8828587626927,6.97637431191358,0,2.36373244159177,0.252722758433675,1.05220927943237,0.650602214813519,0.919608417733892,0.360124259610698,0.90422890701429,0.680364991513279,0.512454881139399,0.468508622798644,2.84573707812917,0,0,0.351902248327898,0.219195732427575,0.556094498451196,1.74126083261083,1.4404749548556,0.796137067273973,0.702213187313235,0,0,2.07125772535502,1.40715635988658,0.540186184383045,0.946978942340841,0.983821158737019,0.308534225774757,0.232533944750408,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.268412837520744,5.04695876553905,0.411618449517138,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.494096864172033,1.00534083520108,0.795825888164603,0.38992817423824,0,0,0,0.189667900953082,0.571242563048644,1.1270773567308,0.203651327845314,0,0.561086559122548,1.13825766823663,1.03327103585722,0,0.740382983530803,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,4.0645701836653,0,1.79261474086228,1.01847051465113,2.81628297946203,4.02015017860358,8.09348379012447,4.48807390072937,6.14777062014145,8.19419351700467,8.6105575075043,8.1931657357869,7.59813920209941,7.23245292907558,1.50791283939272,0,0,0,12.36239542906,10.6662634798905,0.983609672260053,0.252470927204373,0,0.390438744296638,0.646270193198397,0.955875191810208,0.891194696329576,1.13230612315533,1.61924280669958,2.33804686329049,0.395287777946524,3.85585579706168,0.141940085208269,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,7.48967132658334,0.900305470156551,0,1.28602221018955,1.24138163549592,0.891844088010353,0.658196082408484,0,1.40803024838226,0,0.441056796109924,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0,0,13.9068976507882,0,0,0.370389054739423,0,0,0,0.339956859987711,0.139951452323658,0,0.954670618015114,0,0.406638934253697,0.324016022465404,0,0.87345025498471,0,0.495920734352016,0.523511883968059,0.388844919875379,1.24267862617385,0,0.598066184175915,0.496375471371293,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0.920650473014354,2.86447756719698,1.3748254587495,4.11049511862385,2.2661816921691,3.37511250115903,0.45032120322422,2.71885445390523,4.14208249401456,0.31136204275253,0.798049746802062,0.512200817262403,0.729320151204882,0.209613162627982,0.919217542250071,1.33348036680969,0.412070114477788,0.962757628775446,0.505394423527595,1.01391719956096,2.26351609663291,0.561849044819294,0.89635213366817,0.746661096422973,0,0.231768651889711,1.15745532278223,0.412085900803307,0.883193520806384,2.40008476669791,0.354951612318675,1.1921809497366,0.581385666529314,1.12931256498397,0.592302255241736,1.64635175585495,1.05227884575137,0.814824683075171,0,0.711810108745045,0.394017929502254,0.409231043169689,1.70430525304563,1.15743966588685,0.499621155875892,1.87145286756327,0.644613162144895,1.14772999241306,1.32354851471709,1.85494268496337 | ||
|short_description=p6@Edil3 | |short_description=p6@Edil3 | ||
}} | }} |
Revision as of 11:02, 14 November 2012
Short description: | p6@Edil3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Edil3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2876 |
Association with transcript: | 301bp_to_ENSMUST00000043111_5end |
EntrezGene: | Edil3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 9.37e-13 | 14 |
respiratory tube | 9.37e-13 | 14 |
respiration organ | 9.37e-13 | 14 |
pair of lungs | 9.37e-13 | 14 |
lung primordium | 9.37e-13 | 14 |
lung bud | 9.37e-13 | 14 |
regional part of nervous system | 5.00e-12 | 54 |
nervous system | 7.29e-12 | 75 |
central nervous system | 2.22e-11 | 73 |
neural tube | 1.70e-10 | 52 |
neural rod | 1.70e-10 | 52 |
future spinal cord | 1.70e-10 | 52 |
neural keel | 1.70e-10 | 52 |
epithelial bud | 8.71e-10 | 17 |
thoracic cavity element | 8.71e-10 | 17 |
thoracic segment organ | 8.71e-10 | 17 |
thoracic cavity | 8.71e-10 | 17 |
thoracic segment of trunk | 8.71e-10 | 17 |
respiratory primordium | 8.71e-10 | 17 |
endoderm of foregut | 8.71e-10 | 17 |
brain | 1.71e-09 | 47 |
future brain | 1.71e-09 | 47 |
ectoderm-derived structure | 6.46e-09 | 95 |
ectoderm | 6.46e-09 | 95 |
presumptive ectoderm | 6.46e-09 | 95 |
regional part of brain | 7.72e-09 | 46 |
neurectoderm | 2.17e-08 | 64 |
neural plate | 2.17e-08 | 64 |
presumptive neural plate | 2.17e-08 | 64 |
tube | 2.24e-08 | 114 |
epithelial fold | 9.70e-08 | 20 |
anatomical conduit | 1.52e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.