FFCP PHASE1:Mm9::chr7:144505942..144505949,-: Difference between revisions
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|id=chr7:144505942..144505949,- | |id=chr7:144505942..144505949,- | ||
|ontology_enrichment_celltype=CL:0000117!2.16e-10!23;CL:0000337!2.16e-10!23;CL:0000540!9.42e-08!33;CL:0000047!9.42e-08!33;CL:0000031!9.42e-08!33;CL:0000404!9.42e-08!33 | |ontology_enrichment_celltype=CL:0000117!2.16e-10!23;CL:0000337!2.16e-10!23;CL:0000540!9.42e-08!33;CL:0000047!9.42e-08!33;CL:0000031!9.42e-08!33;CL:0000404!9.42e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.99e-36,23;CL:0000337,4.99e-36,23;CL:0000540,1.01e-24,33;CL:0000047,1.01e-24,33;CL:0000031,1.01e-24,33;CL:0000404,1.01e-24,33;CL:0000393,1.04e-20,39;CL:0000211,1.04e-20,39;CL:0000120,3.93e-19,3;CL:0002612,7.84e-19,3;CL:0002319,1.18e-18,43;CL:0002613,2.04e-18,3;CL:0000221,3.37e-18,44;CL:0000133,3.37e-18,44;CL:0002611,8.36e-13,2;CL:0002321,6.80e-11,70;CL:0000723,5.10e-08,91;CL:0000048,5.10e-08,91;CL:0000034,2.01e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.13e-08!6;UBERON:0005174!1.13e-08!6;UBERON:0001137!1.13e-08!6;UBERON:0001948!1.15e-07!5;UBERON:0002315!1.15e-07!5;UBERON:0003076!1.99e-07!12;UBERON:0003057!1.99e-07!12 | |ontology_enrichment_uberon=UBERON:0002240!1.13e-08!6;UBERON:0005174!1.13e-08!6;UBERON:0001137!1.13e-08!6;UBERON:0001948!1.15e-07!5;UBERON:0002315!1.15e-07!5;UBERON:0003076!1.99e-07!12;UBERON:0003057!1.99e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.82e-30,5;UBERON:0002315,5.82e-30,5;UBERON:0002240,5.55e-25,6;UBERON:0005174,5.55e-25,6;UBERON:0001137,5.55e-25,6;UBERON:0002257,7.84e-19,3;UBERON:0002020,3.75e-13,34;UBERON:0002256,8.36e-13,2;UBERON:0003076,1.73e-12,12;UBERON:0003057,1.73e-12,12;UBERON:0002420,5.75e-12,8;UBERON:0007245,5.75e-12,8;UBERON:0010009,5.75e-12,8;UBERON:0010011,5.75e-12,8;UBERON:0000454,5.75e-12,8;UBERON:0000369,2.72e-11,5;UBERON:0002435,2.72e-11,5;UBERON:0000204,2.72e-11,5;UBERON:0010082,2.72e-11,5;UBERON:0001017,2.20e-10,73;UBERON:0001016,4.58e-10,75;UBERON:0001049,3.08e-08,52;UBERON:0005068,3.08e-08,52;UBERON:0006241,3.08e-08,52;UBERON:0007135,3.08e-08,52;UBERON:0000073,6.82e-08,54;UBERON:0004121,1.30e-07,95;UBERON:0000924,1.30e-07,95;UBERON:0006601,1.30e-07,95;UBERON:0000489,4.33e-07,21 | |||
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|short_description=p10@Ebf3 | |short_description=p10@Ebf3 | ||
}} | }} |
Revision as of 04:35, 15 November 2012
Short description: | p10@Ebf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Ebf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:618 |
Association with transcript: | 147bp_to_ENSMUST00000168203_5end |
EntrezGene: | Ebf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.99e-36 | 23 |
neuroblast (sensu Vertebrata) | 4.99e-36 | 23 |
neuron | 1.01e-24 | 33 |
neuronal stem cell | 1.01e-24 | 33 |
neuroblast | 1.01e-24 | 33 |
electrically signaling cell | 1.01e-24 | 33 |
electrically responsive cell | 1.04e-20 | 39 |
electrically active cell | 1.04e-20 | 39 |
granule cell | 3.93e-19 | 3 |
neuron of the ventral spinal cord | 7.84e-19 | 3 |
neural cell | 1.18e-18 | 43 |
striatum neuron | 2.04e-18 | 3 |
ectodermal cell | 3.37e-18 | 44 |
neurectodermal cell | 3.37e-18 | 44 |
neuron of the dorsal spinal cord | 8.36e-13 | 2 |
embryonic cell | 6.80e-11 | 70 |
somatic stem cell | 5.10e-08 | 91 |
multi fate stem cell | 5.10e-08 | 91 |
stem cell | 2.01e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 5.82e-30 | 5 |
gray matter of spinal cord | 5.82e-30 | 5 |
spinal cord | 5.55e-25 | 6 |
dorsal region element | 5.55e-25 | 6 |
dorsum | 5.55e-25 | 6 |
ventral horn of spinal cord | 7.84e-19 | 3 |
gray matter | 3.75e-13 | 34 |
dorsal horn of spinal cord | 8.36e-13 | 2 |
posterior neural tube | 1.73e-12 | 12 |
chordal neural plate | 1.73e-12 | 12 |
basal ganglion | 5.75e-12 | 8 |
nuclear complex of neuraxis | 5.75e-12 | 8 |
aggregate regional part of brain | 5.75e-12 | 8 |
collection of basal ganglia | 5.75e-12 | 8 |
cerebral subcortex | 5.75e-12 | 8 |
corpus striatum | 2.72e-11 | 5 |
striatum | 2.72e-11 | 5 |
ventral part of telencephalon | 2.72e-11 | 5 |
future corpus striatum | 2.72e-11 | 5 |
central nervous system | 2.20e-10 | 73 |
nervous system | 4.58e-10 | 75 |
neural tube | 3.08e-08 | 52 |
neural rod | 3.08e-08 | 52 |
future spinal cord | 3.08e-08 | 52 |
neural keel | 3.08e-08 | 52 |
regional part of nervous system | 6.82e-08 | 54 |
ectoderm-derived structure | 1.30e-07 | 95 |
ectoderm | 1.30e-07 | 95 |
presumptive ectoderm | 1.30e-07 | 95 |
cavitated compound organ | 4.33e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.