FFCP PHASE1:Hg19::chr1:185014712..185014725,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!8.22e-15!42;CL:0000860!3.30e-13!45;CL:0000763!3.72e-13!112;CL:0000049!3.72e-13!112;CL:0000839!1.00e-09!70;CL:0002009!1.80e-09!65;CL:0000766!3.45e-09!76;CL:0002194!4.75e-09!63;CL:0000576!4.75e-09!63;CL:0000040!4.75e-09!63;CL:0000559!4.75e-09!63;CL:0000557!4.92e-09!71 | |ontology_enrichment_celltype=CL:0002057!8.22e-15!42;CL:0000860!3.30e-13!45;CL:0000763!3.72e-13!112;CL:0000049!3.72e-13!112;CL:0000839!1.00e-09!70;CL:0002009!1.80e-09!65;CL:0000766!3.45e-09!76;CL:0002194!4.75e-09!63;CL:0000576!4.75e-09!63;CL:0000040!4.75e-09!63;CL:0000559!4.75e-09!63;CL:0000557!4.92e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.35e-24;33!CL:0002057;2.35e-24;33!CL:0000473;1.67e-16;39!CL:0000234;1.67e-16;39!CL:0000576;9.56e-13;48!CL:0000766;3.71e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;2.35e-24;33!CL:0002057;2.35e-24;33!CL:0000473;1.67e-16;39!CL:0000234;1.67e-16;39!CL:0000576;9.56e-13;48!CL:0000766;3.71e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.70e-20,42;CL:0002057,3.70e-20,42;CL:0000473,7.90e-17,48;CL:0000234,7.90e-17,48;CL:0000763,2.90e-16,108;CL:0000049,2.90e-16,108;CL:0000839,2.35e-13,66;CL:0000766,8.16e-13,72;CL:0002009,1.56e-12,61;CL:0002194,2.29e-12,59;CL:0000576,2.29e-12,59;CL:0000040,2.29e-12,59;CL:0000559,2.29e-12,59;CL:0000557,2.73e-12,67;CL:0000047,1.67e-08,8;CL:0002032,5.15e-07,161;CL:0000837,5.15e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.26e-15;42 | |ontology_enrichment_development_v019=CL:0002057;3.26e-15;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.37e-08;22!DOID:2994;1.37e-08;22 | |ontology_enrichment_disease_v019=DOID:3095;1.37e-08;22!DOID:2994;1.37e-08;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.07e-08,22;DOID:2994,1.07e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.83e-11!94;UBERON:0001016!5.83e-11!94;UBERON:0001017!1.32e-10!82;UBERON:0005743!1.56e-10!86;UBERON:0002780!9.00e-08!41;UBERON:0001890!9.00e-08!41;UBERON:0006240!9.00e-08!41;UBERON:0001869!1.57e-07!32;UBERON:0002020!1.84e-07!34;UBERON:0003528!1.84e-07!34;UBERON:0001049!2.17e-07!57;UBERON:0005068!2.17e-07!57;UBERON:0006241!2.17e-07!57;UBERON:0007135!2.17e-07!57;UBERON:0002346!2.29e-07!90;UBERON:0002371!2.81e-07!80;UBERON:0003080!3.84e-07!42;UBERON:0000955!4.87e-07!69;UBERON:0006238!4.87e-07!69;UBERON:0000956!6.18e-07!25;UBERON:0000203!6.18e-07!25;UBERON:0002390!8.23e-07!102;UBERON:0003061!8.23e-07!102 | |ontology_enrichment_uberon=UBERON:0000073!5.83e-11!94;UBERON:0001016!5.83e-11!94;UBERON:0001017!1.32e-10!82;UBERON:0005743!1.56e-10!86;UBERON:0002780!9.00e-08!41;UBERON:0001890!9.00e-08!41;UBERON:0006240!9.00e-08!41;UBERON:0001869!1.57e-07!32;UBERON:0002020!1.84e-07!34;UBERON:0003528!1.84e-07!34;UBERON:0001049!2.17e-07!57;UBERON:0005068!2.17e-07!57;UBERON:0006241!2.17e-07!57;UBERON:0007135!2.17e-07!57;UBERON:0002346!2.29e-07!90;UBERON:0002371!2.81e-07!80;UBERON:0003080!3.84e-07!42;UBERON:0000955!4.87e-07!69;UBERON:0006238!4.87e-07!69;UBERON:0000956!6.18e-07!25;UBERON:0000203!6.18e-07!25;UBERON:0002390!8.23e-07!102;UBERON:0003061!8.23e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.26e-08;49!UBERON:0000956;2.23e-07;25!UBERON:0000203;2.23e-07;25!UBERON:0003135;4.12e-07;11!UBERON:0000473;5.06e-07;8!UBERON:0002619;5.56e-07;22!UBERON:0001869;6.32e-07;32!UBERON:0000991;9.01e-07;21!UBERON:0003528;9.25e-07;34!UBERON:0002020;9.25e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0000922;5.26e-08;49!UBERON:0000956;2.23e-07;25!UBERON:0000203;2.23e-07;25!UBERON:0003135;4.12e-07;11!UBERON:0000473;5.06e-07;8!UBERON:0002619;5.56e-07;22!UBERON:0001869;6.32e-07;32!UBERON:0000991;9.01e-07;21!UBERON:0003528;9.25e-07;34!UBERON:0002020;9.25e-07;34 | ||
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| ||
|short_description=p5@RNF2 | |short_description=p5@RNF2 | ||
}} | }} | ||
Revision as of 00:39, 16 November 2012
| Short description: | p5@RNF2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_RNF2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 44bp_to_ENST00000498201_5end |
| EntrezGene: | RNF2 |
| HGNC: | 10061 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 3.70e-20 | 42 |
| CD14-positive, CD16-negative classical monocyte | 3.70e-20 | 42 |
| defensive cell | 7.90e-17 | 48 |
| phagocyte | 7.90e-17 | 48 |
| myeloid cell | 2.90e-16 | 108 |
| common myeloid progenitor | 2.90e-16 | 108 |
| myeloid lineage restricted progenitor cell | 2.35e-13 | 66 |
| myeloid leukocyte | 8.16e-13 | 72 |
| macrophage dendritic cell progenitor | 1.56e-12 | 61 |
| monopoietic cell | 2.29e-12 | 59 |
| monocyte | 2.29e-12 | 59 |
| monoblast | 2.29e-12 | 59 |
| promonocyte | 2.29e-12 | 59 |
| granulocyte monocyte progenitor cell | 2.73e-12 | 67 |
| neuronal stem cell | 1.67e-08 | 8 |
| hematopoietic oligopotent progenitor cell | 5.15e-07 | 161 |
| hematopoietic multipotent progenitor cell | 5.15e-07 | 161 |
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 1.07e-08 | 22 |
| germ cell cancer | 1.07e-08 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
