FFCP PHASE1:Hg19::chr1:154581182..154581204,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.47e-28;5!CL:0000540;3.76e-09;6!CL:0000404;3.76e-09;6!CL:0002321;4.24e-09;15 | |ontology_enrichment_celltype_v019=CL:0002322;8.47e-28;5!CL:0000540;3.76e-09;6!CL:0000404;3.76e-09;6!CL:0002321;4.24e-09;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.89e-28,5;CL:0000540,3.87e-09,6;CL:0000031,3.87e-09,6;CL:0000404,3.87e-09,6;CL:0000047,5.99e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;3.76e-09;6 | |ontology_enrichment_development_v019=CL:0000031;3.76e-09;6 | ||
|ontology_enrichment_disease=DOID:305!3.69e-09!106;DOID:0050687!2.79e-07!143 | |ontology_enrichment_disease=DOID:305!3.69e-09!106;DOID:0050687!2.79e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.52e-24!82;UBERON:0005743!9.65e-24!86;UBERON:0000073!1.36e-22!94;UBERON:0001016!1.36e-22!94;UBERON:0000955!8.56e-22!69;UBERON:0006238!8.56e-22!69;UBERON:0001049!2.95e-18!57;UBERON:0005068!2.95e-18!57;UBERON:0006241!2.95e-18!57;UBERON:0007135!2.95e-18!57;UBERON:0002616!1.15e-17!59;UBERON:0002346!2.73e-15!90;UBERON:0003075!3.05e-15!86;UBERON:0007284!3.05e-15!86;UBERON:0002780!2.34e-14!41;UBERON:0001890!2.34e-14!41;UBERON:0006240!2.34e-14!41;UBERON:0000033!2.61e-14!123;UBERON:0003080!9.98e-14!42;UBERON:0000153!1.53e-13!129;UBERON:0007811!1.53e-13!129;UBERON:0003056!3.23e-12!61;UBERON:0002020!1.46e-11!34;UBERON:0003528!1.46e-11!34;UBERON:0000924!2.39e-11!173;UBERON:0006601!2.39e-11!173;UBERON:0001893!3.74e-11!34;UBERON:0004121!3.87e-11!169;UBERON:0002791!7.07e-11!33;UBERON:0001869!9.66e-10!32;UBERON:0002308!7.88e-08!9;UBERON:0000125!7.88e-08!9 | |ontology_enrichment_uberon=UBERON:0001017!7.52e-24!82;UBERON:0005743!9.65e-24!86;UBERON:0000073!1.36e-22!94;UBERON:0001016!1.36e-22!94;UBERON:0000955!8.56e-22!69;UBERON:0006238!8.56e-22!69;UBERON:0001049!2.95e-18!57;UBERON:0005068!2.95e-18!57;UBERON:0006241!2.95e-18!57;UBERON:0007135!2.95e-18!57;UBERON:0002616!1.15e-17!59;UBERON:0002346!2.73e-15!90;UBERON:0003075!3.05e-15!86;UBERON:0007284!3.05e-15!86;UBERON:0002780!2.34e-14!41;UBERON:0001890!2.34e-14!41;UBERON:0006240!2.34e-14!41;UBERON:0000033!2.61e-14!123;UBERON:0003080!9.98e-14!42;UBERON:0000153!1.53e-13!129;UBERON:0007811!1.53e-13!129;UBERON:0003056!3.23e-12!61;UBERON:0002020!1.46e-11!34;UBERON:0003528!1.46e-11!34;UBERON:0000924!2.39e-11!173;UBERON:0006601!2.39e-11!173;UBERON:0001893!3.74e-11!34;UBERON:0004121!3.87e-11!169;UBERON:0002791!7.07e-11!33;UBERON:0001869!9.66e-10!32;UBERON:0002308!7.88e-08!9;UBERON:0000125!7.88e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000125;2.84e-14;9!UBERON:0002308;2.84e-14;9!UBERON:0002298;4.52e-14;6!UBERON:0002148;2.22e-11;2!UBERON:0001875;2.22e-11;2!UBERON:0006331;2.22e-11;2!UBERON:0009662;2.22e-11;2!UBERON:0006514;2.22e-11;2!UBERON:0000988;7.19e-08;3!UBERON:0001896;7.19e-08;3!UBERON:0005290;7.19e-08;3!UBERON:0000073;2.05e-07;53!UBERON:0002616;2.05e-07;53!UBERON:0009663;3.21e-07;7!UBERON:0004733;4.31e-07;12!UBERON:0002028;4.31e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0000125;2.84e-14;9!UBERON:0002308;2.84e-14;9!UBERON:0002298;4.52e-14;6!UBERON:0002148;2.22e-11;2!UBERON:0001875;2.22e-11;2!UBERON:0006331;2.22e-11;2!UBERON:0009662;2.22e-11;2!UBERON:0006514;2.22e-11;2!UBERON:0000988;7.19e-08;3!UBERON:0001896;7.19e-08;3!UBERON:0005290;7.19e-08;3!UBERON:0000073;2.05e-07;53!UBERON:0002616;2.05e-07;53!UBERON:0009663;3.21e-07;7!UBERON:0004733;4.31e-07;12!UBERON:0002028;4.31e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,4.37e-14,9;UBERON:0002308,4.37e-14,9;UBERON:0002298,7.35e-14,6;UBERON:0001875,3.23e-11,2;UBERON:0006514,3.23e-11,2;UBERON:0002148,3.98e-11,2;UBERON:0006331,3.98e-11,2;UBERON:0009662,3.98e-11,2;UBERON:0001017,6.44e-11,81;UBERON:0001049,1.66e-10,56;UBERON:0005068,1.66e-10,56;UBERON:0006241,1.66e-10,56;UBERON:0007135,1.66e-10,56;UBERON:0001016,1.50e-09,89;UBERON:0000073,2.41e-09,53;UBERON:0002616,2.41e-09,53;UBERON:0003076,2.36e-08,15;UBERON:0003057,2.36e-08,15;UBERON:0003075,7.98e-08,82;UBERON:0007284,7.98e-08,82;UBERON:0001896,8.00e-08,3;UBERON:0005290,8.00e-08,3;UBERON:0010096,8.00e-08,3;UBERON:0000988,1.06e-07,3;UBERON:0002346,2.37e-07,86;UBERON:0009663,3.51e-07,7;UBERON:0004733,5.44e-07,12;UBERON:0002028,5.44e-07,12;UBERON:0007277,5.44e-07,12;UBERON:0000955,9.19e-07,68;UBERON:0006238,9.19e-07,68;UBERON:0010371,9.99e-07,104 | |||
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| ||
|short_description=p7@ADAR | |short_description=p7@ADAR | ||
}} | }} |
Revision as of 07:08, 21 November 2012
Short description: | p7@ADAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ADAR_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -458bp_to_NM_001111, NM_015840, NM_015841_5end |
EntrezGene: | ADAR |
HGNC: | 225 |
UniProt: | P55265 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.89e-28 | 5 |
neuron | 3.87e-09 | 6 |
neuroblast | 3.87e-09 | 6 |
electrically signaling cell | 3.87e-09 | 6 |
neuronal stem cell | 5.99e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neural nucleus | 4.37e-14 | 9 |
nucleus of brain | 4.37e-14 | 9 |
brainstem | 7.35e-14 | 6 |
globus pallidus | 3.23e-11 | 2 |
pallidum | 3.23e-11 | 2 |
locus ceruleus | 3.98e-11 | 2 |
brainstem nucleus | 3.98e-11 | 2 |
hindbrain nucleus | 3.98e-11 | 2 |
central nervous system | 6.44e-11 | 81 |
neural tube | 1.66e-10 | 56 |
neural rod | 1.66e-10 | 56 |
future spinal cord | 1.66e-10 | 56 |
neural keel | 1.66e-10 | 56 |
nervous system | 1.50e-09 | 89 |
regional part of nervous system | 2.41e-09 | 53 |
regional part of brain | 2.41e-09 | 53 |
posterior neural tube | 2.36e-08 | 15 |
chordal neural plate | 2.36e-08 | 15 |
neural plate | 7.98e-08 | 82 |
presumptive neural plate | 7.98e-08 | 82 |
medulla oblongata | 8.00e-08 | 3 |
myelencephalon | 8.00e-08 | 3 |
future myelencephalon | 8.00e-08 | 3 |
pons | 1.06e-07 | 3 |
neurectoderm | 2.37e-07 | 86 |
telencephalic nucleus | 3.51e-07 | 7 |
segmental subdivision of hindbrain | 5.44e-07 | 12 |
hindbrain | 5.44e-07 | 12 |
presumptive hindbrain | 5.44e-07 | 12 |
brain | 9.19e-07 | 68 |
future brain | 9.19e-07 | 68 |
ecto-epithelium | 9.99e-07 | 104 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.