Coexpression cluster:C2867: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|tfbs_overrepresentation=0.191353,0.0774498,0.50138,0.0631091,0.257053,0.0761719,0.0569281,0.510252,0.043387,0.0341265,0.181435,0.00510754,0.243414,0.164339,0.193153,0.0816702,0.00119189,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.268949,0.119094,0.186914,0.122514,0.00379621,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.0130526,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.00227875,0.439574,0.0792005,0.113084,0.216289,0.0267205,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,0.131915,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.114558,0.199405,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.280878,0.0541957,0.0883058,0.105785,0.00127811,0.34189,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.0296391,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.0117613,0.0530169,0.166112,0.0534404,0.0142968,0.2321,0.179282,0.0103372,0.0715212,0.105131,0.118265,0.0177884,0.234755,0.230552,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.108938,0.224443,0.140245,0.241581,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.329956,0.346995,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.0220395,0.0234783,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.309911,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.463127,0.15291,0.206234,0.238926,0.239646,0.128521,0.00864814,0.207017,0.14037,0.0370757,0.0916845,0.324438,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.0711631,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.690367,0.495926,0.869559,0.73998,0.668426,0.901171,0.376043,0.104083,0.73391,0.332539,0.186966,0.464128,0.389374,0.0631104,0.414547,0.146105,0.017023,0.00397825,0.364388,0.34505,0.0785304,0.153719,0.49089,0.323639,0.0348478,0.241524,0.0232022,0.234628,0.0386001,0.143893,0.41477,0.279946,0.524104,0.467825,0.201843,0.751064,0.632838,0.076794,0.127765,0.511459,0.221488,0.322903,0.350886,0.380582,0.0590382,0.398372,0.286293,0.606558,0.708425,0.359128,0.395864,0.318966,0.0782875,0.547291,0.682118,0.512763,0.00131544,0.214221,0.181193,0.464342,0.109673,0.714007,0.235444,0.48585,0.402752,0.840703,0.349116,0.005939,0.239545,0.432689,0.640367,0.343881,0.0442147,0.606382,0.0167268,0.258511,0.316925,0.0728506,0.573659,0.211506,0.0883859,0.0962508,0.238465,0.0346954,0.571578,0.323783,0.508325,0.187096,0.284591,0.093482,0.046332,0.280307,0.393583,0.469888,0.0596868,0.0984075,0.293026,0.16661,0.694744,0.605423,0.372182,0.109146,0.578951,0.0112154,0.41035,0.199377,0.35234,0.644643,0.0071728,0.291917,0.421082,0.25441,0.202782,0.307342,0.517933,0.584705,0.517001,0.0746589,0.73448,0.419676,0.188259,0.0191441,0.477589,0.46699,0.546448,0.560187,0.00727521,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.0904061,0.370995,0.360161,0.0194906,0.386216,0.0133933,0.706685,0.606408,0.00345961,0.360203,0.333725,0.119902,0.289666,0.500627,0.0365674,0.452694,0.00168732,0.0414975,0.265037,0.0791459,0.0543569,0.00784981,0.341771,0.424526,0.0939249,0.356381,0.184395,0.55524,0.256884,0.206945,0.304719,0.462531,0.296994,0.244339,0.117049,0.0786167,0.629381,0.729876,0.111753,0.276604,0.436806,0.576549,0.152784,0.744662,0.734628,0.397546,0.0919254,0.0735469,0.248103,0.102621,0.00296492,0.187642,0.286156,0.261868,0.541583,0.540322,0.0334242,0.146385,0.365815,0.0576261,0.382413,0.164977,0.175633,0.139918,0.34669,0.0828344,0.0272905,0.0238089,0.383126,0.0719157,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.00318269,0.432751,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.417003,0.251882,0.172263,0.243319,0.0637178,0.257309,0.500692,0.166608,0.227224,0.238082,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,5.99943e-05,0.00419343,0.03989,0.171436,0.05892,0.0691994,0.00402689,0.00153936,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.254051,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.245002,0.170848,0.487259,0.302909,0.363016,0.100188,0.223102,0.107653,9.38741e-06,0.00237223,0.191914,0.184022,0.00201985,0.00118257,0.116818,0.389792,0.36316,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.458838,0.548036,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,0.351199,0.833813,0.758305,0.278645,0.365775,0.155708,0.248017,0.22995,0.285695,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.012683,0.0939463,0.00500232,0.0779623,0.0471607,0.163865,0.226359,0.404165,0.499775,0.265324,0.279778,0.141699,0.00406251,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.0117528,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,0.608002,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.335582,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.690952,0.21618,0.0323312,0.107021,0.238657,0.20272,0.392453,0.0164195,0.0780061,0.315336,0.230477,0.279823,0.0487563,0.502112,0.140541,0.0478217,0.507599,0.0155059,0.0575231,0.174063,0.163504,0.459091,0.189333,0.0338476,0.296013,0.0895871,0.537932,0.459994,0.523209,0.548059,0.25423,0.490559,0.45013,0.153911,0.472542,0.322168,0.0510811,0.0074346,0.509113,0.483077,0.061678,0.0147688,0.541914,0.627201,0.938109,0.934991,0.290703,0.622694,0.722684,0.478691,0.360199,0.608176,0.290133,0.824761,0.365494,0.212703,0.201391,0.364079,0.680099,0.579886,0.421038,0.206595,0.328518,0.545608,0.310552,0.324103,0.483764,0.261345,0.19941,0.209437,0.11765,0.748403,0.0651244,0.361291,0.464001,0.336867,0.579004,0.334776,0.278028,0.586133,0.0376583,0.257956,0.264245,0.379063,0.326516,0.0391986,0.436016,0.475063,0.202522,0.183837,0.507324,0.126097,0.3955,0.0215868,0.212239,0.294954,0.156999,0.35974,0.0999766,0.39549,0.234254,0.0103854,0.328421,0.721266,0.000785185,0.0171443,0.0158343,0.172147,0.424691,0.715362,0.139684,0.077723,0.635682,0.274432,0.284496,0.000881831,0.512178,0.563206,0.527709,0.684899,0.263302,0.552023,0.180735,0.775168,0.216102,0.254659,0.109605,0.0924199,0.0585759,0.226491,0.0175854,0.463987,0.0782409,0.503881,0.454761,0.000658711,0.483658,0.452129,0.301581,0.261657,0.346776,0.466529,0.187223,0.438176,0.349112,0.741477,0.385425,0.000569773,0.0250382,0.386339,0.0849889,0.598787,0.478745,0.611661,0.319747,0.136743,0.197104,0.608127,0.282281,0.0710918,0.2536,0.246827,0.564333,0.00168296,0.387134,0.559969,0.358813,0.0261538,0.574252,0.0317703,0.0685505,0.457747,0.348802,0.476541,0.215342,0.447581,0.0187686,0.254628,0.00183295,0.139532,0.416962,0.0806585,0.378333,0.738545,0.264038,0.22798,0.102495,0.350933,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.00849027,0.0239343,0.246234,0.211271,0.281295,0.0394002,0.118257,0.125087,0.215123,0.321224,0.469461,0.00757805,0.00394708,0.187728,0.231754,0.249415,0.283107,0.285648,0.427316,0.391071,0.279553,0.25563,0.240967,0.160955,0.036192,0.0432189,0.122439,0.16188,0.23235,0.0469743,0.0713545,0.112422,0.170886,0.267687,0.00686166,0.284866,0.0887542,0.0395756,0.338547,0.147872,0.189388,0.293546,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.259328,0.113839,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,1.3342e-05,0.162089,0.330223,0.0136966,0.000167787,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.266687,0.184534,0.248707,0.00699456,0.15156,2.82045e-05,0.313858,0.223773,0.036547,0.181895,0.253768,0.30702,0.202977,0.170837,0.327002,0.28543,0.222656,0.00239762,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.0371525,0.139723,0.0708274,0.0710478,0.196248,0.00545806,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.00571761,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.00173808,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.0755696,0.433518,0.184359,0.334474,0.325785,0.0364266,0.291176,0.0123861,0.322827,0.229571,0.359036,0.0641033,0.171704,0.208256,0.265058,0.256405,0.362898,0.302133,0.40806,0.151361,0.000371318,0.286696,0.150674,0.00325002,0.246177,0.35674,0.0737175,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.343425,0.132374,0.285122,0.22741,0.203996,0.276721,0.321965,0.264707,0.121257 | |tfbs_overrepresentation=0.191353,0.0774498,0.50138,0.0631091,0.257053,0.0761719,0.0569281,0.510252,0.043387,0.0341265,0.181435,0.00510754,0.243414,0.164339,0.193153,0.0816702,0.00119189,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.268949,0.119094,0.186914,0.122514,0.00379621,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.0130526,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.00227875,0.439574,0.0792005,0.113084,0.216289,0.0267205,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,0.131915,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.114558,0.199405,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.280878,0.0541957,0.0883058,0.105785,0.00127811,0.34189,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.0296391,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.0117613,0.0530169,0.166112,0.0534404,0.0142968,0.2321,0.179282,0.0103372,0.0715212,0.105131,0.118265,0.0177884,0.234755,0.230552,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.108938,0.224443,0.140245,0.241581,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.329956,0.346995,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.0220395,0.0234783,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.309911,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.463127,0.15291,0.206234,0.238926,0.239646,0.128521,0.00864814,0.207017,0.14037,0.0370757,0.0916845,0.324438,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.0711631,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.690367,0.495926,0.869559,0.73998,0.668426,0.901171,0.376043,0.104083,0.73391,0.332539,0.186966,0.464128,0.389374,0.0631104,0.414547,0.146105,0.017023,0.00397825,0.364388,0.34505,0.0785304,0.153719,0.49089,0.323639,0.0348478,0.241524,0.0232022,0.234628,0.0386001,0.143893,0.41477,0.279946,0.524104,0.467825,0.201843,0.751064,0.632838,0.076794,0.127765,0.511459,0.221488,0.322903,0.350886,0.380582,0.0590382,0.398372,0.286293,0.606558,0.708425,0.359128,0.395864,0.318966,0.0782875,0.547291,0.682118,0.512763,0.00131544,0.214221,0.181193,0.464342,0.109673,0.714007,0.235444,0.48585,0.402752,0.840703,0.349116,0.005939,0.239545,0.432689,0.640367,0.343881,0.0442147,0.606382,0.0167268,0.258511,0.316925,0.0728506,0.573659,0.211506,0.0883859,0.0962508,0.238465,0.0346954,0.571578,0.323783,0.508325,0.187096,0.284591,0.093482,0.046332,0.280307,0.393583,0.469888,0.0596868,0.0984075,0.293026,0.16661,0.694744,0.605423,0.372182,0.109146,0.578951,0.0112154,0.41035,0.199377,0.35234,0.644643,0.0071728,0.291917,0.421082,0.25441,0.202782,0.307342,0.517933,0.584705,0.517001,0.0746589,0.73448,0.419676,0.188259,0.0191441,0.477589,0.46699,0.546448,0.560187,0.00727521,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.0904061,0.370995,0.360161,0.0194906,0.386216,0.0133933,0.706685,0.606408,0.00345961,0.360203,0.333725,0.119902,0.289666,0.500627,0.0365674,0.452694,0.00168732,0.0414975,0.265037,0.0791459,0.0543569,0.00784981,0.341771,0.424526,0.0939249,0.356381,0.184395,0.55524,0.256884,0.206945,0.304719,0.462531,0.296994,0.244339,0.117049,0.0786167,0.629381,0.729876,0.111753,0.276604,0.436806,0.576549,0.152784,0.744662,0.734628,0.397546,0.0919254,0.0735469,0.248103,0.102621,0.00296492,0.187642,0.286156,0.261868,0.541583,0.540322,0.0334242,0.146385,0.365815,0.0576261,0.382413,0.164977,0.175633,0.139918,0.34669,0.0828344,0.0272905,0.0238089,0.383126,0.0719157,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.00318269,0.432751,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.417003,0.251882,0.172263,0.243319,0.0637178,0.257309,0.500692,0.166608,0.227224,0.238082,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,5.99943e-05,0.00419343,0.03989,0.171436,0.05892,0.0691994,0.00402689,0.00153936,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.254051,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.245002,0.170848,0.487259,0.302909,0.363016,0.100188,0.223102,0.107653,9.38741e-06,0.00237223,0.191914,0.184022,0.00201985,0.00118257,0.116818,0.389792,0.36316,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.458838,0.548036,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,0.351199,0.833813,0.758305,0.278645,0.365775,0.155708,0.248017,0.22995,0.285695,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.012683,0.0939463,0.00500232,0.0779623,0.0471607,0.163865,0.226359,0.404165,0.499775,0.265324,0.279778,0.141699,0.00406251,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.0117528,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,0.608002,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.335582,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.690952,0.21618,0.0323312,0.107021,0.238657,0.20272,0.392453,0.0164195,0.0780061,0.315336,0.230477,0.279823,0.0487563,0.502112,0.140541,0.0478217,0.507599,0.0155059,0.0575231,0.174063,0.163504,0.459091,0.189333,0.0338476,0.296013,0.0895871,0.537932,0.459994,0.523209,0.548059,0.25423,0.490559,0.45013,0.153911,0.472542,0.322168,0.0510811,0.0074346,0.509113,0.483077,0.061678,0.0147688,0.541914,0.627201,0.938109,0.934991,0.290703,0.622694,0.722684,0.478691,0.360199,0.608176,0.290133,0.824761,0.365494,0.212703,0.201391,0.364079,0.680099,0.579886,0.421038,0.206595,0.328518,0.545608,0.310552,0.324103,0.483764,0.261345,0.19941,0.209437,0.11765,0.748403,0.0651244,0.361291,0.464001,0.336867,0.579004,0.334776,0.278028,0.586133,0.0376583,0.257956,0.264245,0.379063,0.326516,0.0391986,0.436016,0.475063,0.202522,0.183837,0.507324,0.126097,0.3955,0.0215868,0.212239,0.294954,0.156999,0.35974,0.0999766,0.39549,0.234254,0.0103854,0.328421,0.721266,0.000785185,0.0171443,0.0158343,0.172147,0.424691,0.715362,0.139684,0.077723,0.635682,0.274432,0.284496,0.000881831,0.512178,0.563206,0.527709,0.684899,0.263302,0.552023,0.180735,0.775168,0.216102,0.254659,0.109605,0.0924199,0.0585759,0.226491,0.0175854,0.463987,0.0782409,0.503881,0.454761,0.000658711,0.483658,0.452129,0.301581,0.261657,0.346776,0.466529,0.187223,0.438176,0.349112,0.741477,0.385425,0.000569773,0.0250382,0.386339,0.0849889,0.598787,0.478745,0.611661,0.319747,0.136743,0.197104,0.608127,0.282281,0.0710918,0.2536,0.246827,0.564333,0.00168296,0.387134,0.559969,0.358813,0.0261538,0.574252,0.0317703,0.0685505,0.457747,0.348802,0.476541,0.215342,0.447581,0.0187686,0.254628,0.00183295,0.139532,0.416962,0.0806585,0.378333,0.738545,0.264038,0.22798,0.102495,0.350933,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.00849027,0.0239343,0.246234,0.211271,0.281295,0.0394002,0.118257,0.125087,0.215123,0.321224,0.469461,0.00757805,0.00394708,0.187728,0.231754,0.249415,0.283107,0.285648,0.427316,0.391071,0.279553,0.25563,0.240967,0.160955,0.036192,0.0432189,0.122439,0.16188,0.23235,0.0469743,0.0713545,0.112422,0.170886,0.267687,0.00686166,0.284866,0.0887542,0.0395756,0.338547,0.147872,0.189388,0.293546,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.259328,0.113839,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,1.3342e-05,0.162089,0.330223,0.0136966,0.000167787,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.266687,0.184534,0.248707,0.00699456,0.15156,2.82045e-05,0.313858,0.223773,0.036547,0.181895,0.253768,0.30702,0.202977,0.170837,0.327002,0.28543,0.222656,0.00239762,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.0371525,0.139723,0.0708274,0.0710478,0.196248,0.00545806,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.00571761,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.00173808,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.0755696,0.433518,0.184359,0.334474,0.325785,0.0364266,0.291176,0.0123861,0.322827,0.229571,0.359036,0.0641033,0.171704,0.208256,0.265058,0.256405,0.362898,0.302133,0.40806,0.151361,0.000371318,0.286696,0.150674,0.00325002,0.246177,0.35674,0.0737175,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.343425,0.132374,0.285122,0.22741,0.203996,0.276721,0.321965,0.264707,0.121257 | ||
|tfbs_overrepresentation_for_novel_motifs=0.590005,0.0888524,0.581696,0.741427,1.32255,0.739643,0.821651,0.395818,0.392841,0.151681,0.706765,0.867962,0.341754,0.809319,0.532789,0.559384,1.05593,0.471262,0.356737,0.223552,0.581762,0.169357,0.731221,0.528529,0.632849,0.892087,0.316693,0.728867,0.537869,0.806311,0.682839,1.09415,0.433165,0.911389,0.49475,0.0842336,0.491074,0.740899,0.463978,0.371755,0.493145,0.66492,1.63146,0.53106,0.0946706,1.49501,0.822818,0.694903,0.99221,0.538016,0.90714,0.83543,0.25073,1.17354,1.33024,0.812467,3.3832,0.777235,0.297448,0.776148,1.13655,0.825354,0.393426,1.02706,0.844545,0.991076,1.42026,1.79268,1.08337,1.62905,0.650393,0.402607,0.692875,1.32819,0.336329,0.321165,0.305238,1.00941,1.08,0.62601,0.362435,1.02594,0.844168,0.399165,1.27559,0.109222,0.6318,0.291738,0.934646,1.89266,1.51507,1.24792,1.11156,0.441618,0.535192,0.456994,0.354969,1.15558,0.939507,0.272395,0.465545,1.1057,1.14983,1.05974,0.979006,0.701817,1.04326,0.805616,0.632569,1.28386,0.594299,1.14697,0.575476,0.717043,1.46636,0.489254,0.12452,0.681522,0.988625,0.444962,1.31973,0.932085,0.736652,0.856196,1.57854,1.0102,0.814847,1.11673,1.36323,0.458105,1.24863,0.68598,1.37788,0.852645,1.52813,0.283547,0.676268,0.729481,1.48509,2.34913,1.94535,1.44718,0.8167,1.15194,0.980848,0.768101,0.963351,2.1895,0.661255,0.437774,1.23342,0.175846,1.24902,1.76758,0.824835,1.65997,0.917558,0.518428,0.632914,0.600782,1.44595,1.23002,1.07918,0.604379,0.997702,0.843324,0.423521,0.820225,0.0401987 | |tfbs_overrepresentation_for_novel_motifs=0.590005,0.0888524,0.581696,0.741427,1.32255,0.739643,0.821651,0.395818,0.392841,0.151681,0.706765,0.867962,0.341754,0.809319,0.532789,0.559384,1.05593,0.471262,0.356737,0.223552,0.581762,0.169357,0.731221,0.528529,0.632849,0.892087,0.316693,0.728867,0.537869,0.806311,0.682839,1.09415,0.433165,0.911389,0.49475,0.0842336,0.491074,0.740899,0.463978,0.371755,0.493145,0.66492,1.63146,0.53106,0.0946706,1.49501,0.822818,0.694903,0.99221,0.538016,0.90714,0.83543,0.25073,1.17354,1.33024,0.812467,3.3832,0.777235,0.297448,0.776148,1.13655,0.825354,0.393426,1.02706,0.844545,0.991076,1.42026,1.79268,1.08337,1.62905,0.650393,0.402607,0.692875,1.32819,0.336329,0.321165,0.305238,1.00941,1.08,0.62601,0.362435,1.02594,0.844168,0.399165,1.27559,0.109222,0.6318,0.291738,0.934646,1.89266,1.51507,1.24792,1.11156,0.441618,0.535192,0.456994,0.354969,1.15558,0.939507,0.272395,0.465545,1.1057,1.14983,1.05974,0.979006,0.701817,1.04326,0.805616,0.632569,1.28386,0.594299,1.14697,0.575476,0.717043,1.46636,0.489254,0.12452,0.681522,0.988625,0.444962,1.31973,0.932085,0.736652,0.856196,1.57854,1.0102,0.814847,1.11673,1.36323,0.458105,1.24863,0.68598,1.37788,0.852645,1.52813,0.283547,0.676268,0.729481,1.48509,2.34913,1.94535,1.44718,0.8167,1.15194,0.980848,0.768101,0.963351,2.1895,0.661255,0.437774,1.23342,0.175846,1.24902,1.76758,0.824835,1.65997,0.917558,0.518428,0.632914,0.600782,1.44595,1.23002,1.07918,0.604379,0.997702,0.843324,0.423521,0.820225,0.0401987 | ||
|tfbs_overrepresentation_jaspar=MA0003.1;0.0214529,MA0004.1;0.71247,MA0006.1;0.532262,MA0007.1;0.6918,MA0009.1;1.20602,MA0014.1;0.244769,MA0017.1;0.577281,MA0019.1;0.873355,MA0024.1;1.09684,MA0025.1;1.34373,MA0027.1;2.83281,MA0028.1;0.550763,MA0029.1;1.11704,MA0030.1;1.10506,MA0031.1;1.03735,MA0038.1;0.824639,MA0040.1;1.12314,MA0041.1;0.732902,MA0042.1;0.697662,MA0043.1;1.20635,MA0046.1;2.68101,MA0048.1;0.25531,MA0050.1;0.69864,MA0051.1;0.820063,MA0052.1;1.12718,MA0055.1;0.125954,MA0056.1;0,MA0057.1;0.248209,MA0058.1;0.605914,MA0059.1;0.604454,MA0060.1;0.393285,MA0061.1;0.360128,MA0063.1;0,MA0066.1;0.825101,MA0067.1;1.53181,MA0068.1;0.313194,MA0069.1;1.19071,MA0070.1;1.17908,MA0071.1;0.782546,MA0072.1;1.1744,MA0073.1;0.00636811,MA0074.1;0.819248,MA0076.1;0.623864,MA0077.1;1.16637,MA0078.1;0.926725,MA0081.1;0.604638,MA0083.1;1.21381,MA0084.1;1.72172,MA0087.1;1.17185,MA0088.1;0.182167,MA0089.1;0,MA0090.1;0.640115,MA0091.1;0.715356,MA0092.1;0.673508,MA0093.1;0.535768,MA0095.1;0,MA0098.1;0,MA0100.1;1.9583,MA0101.1;0.539569,MA0103.1;0.521546,MA0105.1;0.232357,MA0106.1;0.869173,MA0107.1;0.453492,MA0108.2;1.03412,MA0109.1;0,MA0111.1;0.655276,MA0113.1;0.886811,MA0114.1;0.447443,MA0115.1;1.45393,MA0116.1;0.457606,MA0117.1;1.24497,MA0119.1;0.586221,MA0122.1;1.27173,MA0124.1;1.41151,MA0125.1;1.32534,MA0130.1;0,MA0131.1;0.94608,MA0132.1;0,MA0133.1;0,MA0135.1;1.23748,MA0136.1;0.832277,MA0139.1;0.344952,MA0140.1;0.779643,MA0141.1;0.602484,MA0142.1;1.00381,MA0143.1;0.887001,MA0144.1;0.430413,MA0145.1;0.195821,MA0146.1;0.061409,MA0147.1;0.46175,MA0148.1;0.739888,MA0149.1;0.769072,MA0062.2;0.353589,MA0035.2;0.778873,MA0039.2;0.0247757,MA0138.2;0.928035,MA0002.2;0.379056,MA0137.2;0.558189,MA0104.2;0.392359,MA0047.2;0.856092,MA0112.2;0.187982,MA0065.2;0.199162,MA0150.1;0.633493,MA0151.1;0,MA0152.1;0.78681,MA0153.1;1.30799,MA0154.1;0.229241,MA0155.1;0.180766,MA0156.1;0.560797,MA0157.1;0.97481,MA0158.1;0,MA0159.1;0.462502,MA0160.1;0.756582,MA0161.1;0,MA0162.1;0.0928415,MA0163.1;0.253219,MA0164.1;0.90014,MA0080.2;0.535868,MA0018.2;0.870662,MA0099.2;0.7872,MA0079.2;0.0270533,MA0102.2;1.75932,MA0258.1;0.418966,MA0259.1;0.471671,MA0442.1;0 | |||
}} | }} |
Revision as of 20:58, 22 January 2013
Full id: C2867_neuroectodermal_CD19_smooth_carcinoid_cerebellum_umbilical_appendix
Phase1 CAGE Peaks
Hg19::chr6:70576369..70576372,+ | p9@COL19A1 |
Hg19::chr6:70576438..70576454,+ | p1@COL19A1 |
Hg19::chr6:70576457..70576468,+ | p2@COL19A1 |
Hg19::chr6:70917090..70917094,+ | p@chr6:70917090..70917094 + |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.08e-17 | 24 |
pro-B cell | 5.08e-17 | 24 |
B cell | 1.09e-14 | 14 |
circulating cell | 9.09e-07 | 6 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.0214529 |
MA0004.1 | 0.71247 |
MA0006.1 | 0.532262 |
MA0007.1 | 0.6918 |
MA0009.1 | 1.20602 |
MA0014.1 | 0.244769 |
MA0017.1 | 0.577281 |
MA0019.1 | 0.873355 |
MA0024.1 | 1.09684 |
MA0025.1 | 1.34373 |
MA0027.1 | 2.83281 |
MA0028.1 | 0.550763 |
MA0029.1 | 1.11704 |
MA0030.1 | 1.10506 |
MA0031.1 | 1.03735 |
MA0038.1 | 0.824639 |
MA0040.1 | 1.12314 |
MA0041.1 | 0.732902 |
MA0042.1 | 0.697662 |
MA0043.1 | 1.20635 |
MA0046.1 | 2.68101 |
MA0048.1 | 0.25531 |
MA0050.1 | 0.69864 |
MA0051.1 | 0.820063 |
MA0052.1 | 1.12718 |
MA0055.1 | 0.125954 |
MA0056.1 | 0 |
MA0057.1 | 0.248209 |
MA0058.1 | 0.605914 |
MA0059.1 | 0.604454 |
MA0060.1 | 0.393285 |
MA0061.1 | 0.360128 |
MA0063.1 | 0 |
MA0066.1 | 0.825101 |
MA0067.1 | 1.53181 |
MA0068.1 | 0.313194 |
MA0069.1 | 1.19071 |
MA0070.1 | 1.17908 |
MA0071.1 | 0.782546 |
MA0072.1 | 1.1744 |
MA0073.1 | 0.00636811 |
MA0074.1 | 0.819248 |
MA0076.1 | 0.623864 |
MA0077.1 | 1.16637 |
MA0078.1 | 0.926725 |
MA0081.1 | 0.604638 |
MA0083.1 | 1.21381 |
MA0084.1 | 1.72172 |
MA0087.1 | 1.17185 |
MA0088.1 | 0.182167 |
MA0089.1 | 0 |
MA0090.1 | 0.640115 |
MA0091.1 | 0.715356 |
MA0092.1 | 0.673508 |
MA0093.1 | 0.535768 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 1.9583 |
MA0101.1 | 0.539569 |
MA0103.1 | 0.521546 |
MA0105.1 | 0.232357 |
MA0106.1 | 0.869173 |
MA0107.1 | 0.453492 |
MA0108.2 | 1.03412 |
MA0109.1 | 0 |
MA0111.1 | 0.655276 |
MA0113.1 | 0.886811 |
MA0114.1 | 0.447443 |
MA0115.1 | 1.45393 |
MA0116.1 | 0.457606 |
MA0117.1 | 1.24497 |
MA0119.1 | 0.586221 |
MA0122.1 | 1.27173 |
MA0124.1 | 1.41151 |
MA0125.1 | 1.32534 |
MA0130.1 | 0 |
MA0131.1 | 0.94608 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.23748 |
MA0136.1 | 0.832277 |
MA0139.1 | 0.344952 |
MA0140.1 | 0.779643 |
MA0141.1 | 0.602484 |
MA0142.1 | 1.00381 |
MA0143.1 | 0.887001 |
MA0144.1 | 0.430413 |
MA0145.1 | 0.195821 |
MA0146.1 | 0.061409 |
MA0147.1 | 0.46175 |
MA0148.1 | 0.739888 |
MA0149.1 | 0.769072 |
MA0062.2 | 0.353589 |
MA0035.2 | 0.778873 |
MA0039.2 | 0.0247757 |
MA0138.2 | 0.928035 |
MA0002.2 | 0.379056 |
MA0137.2 | 0.558189 |
MA0104.2 | 0.392359 |
MA0047.2 | 0.856092 |
MA0112.2 | 0.187982 |
MA0065.2 | 0.199162 |
MA0150.1 | 0.633493 |
MA0151.1 | 0 |
MA0152.1 | 0.78681 |
MA0153.1 | 1.30799 |
MA0154.1 | 0.229241 |
MA0155.1 | 0.180766 |
MA0156.1 | 0.560797 |
MA0157.1 | 0.97481 |
MA0158.1 | 0 |
MA0159.1 | 0.462502 |
MA0160.1 | 0.756582 |
MA0161.1 | 0 |
MA0162.1 | 0.0928415 |
MA0163.1 | 0.253219 |
MA0164.1 | 0.90014 |
MA0080.2 | 0.535868 |
MA0018.2 | 0.870662 |
MA0099.2 | 0.7872 |
MA0079.2 | 0.0270533 |
MA0102.2 | 1.75932 |
MA0258.1 | 0.418966 |
MA0259.1 | 0.471671 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
SRF#6722 | 3 | 10.3478836966259 | 0.00143989377840126 | 0.00924284365841729 |
TRIM28#10155 | 3 | 13.9428937839469 | 0.000597285818425842 | 0.0049979916345306 |
ZNF263#10127 | 3 | 6.16638122775801 | 0.00653981434797598 | 0.0279945762229799 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.