FFCP PHASE1:Hg19::chr11:57335677..57335699,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9246|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12490|TSSclassifier=S|UniProt=|association_with_transcript=57bp_to_ENST00000340573_5end|description=CAGE_peak_5_at_UBE2L6_5end|id=chr11:57335677..57335699,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;1.95e-08;5!CL:0000540;6.40e-08;6!CL:0000404;6.40e-08;6|ontology_enrichment_celltype_v019_2=CL:0000047,4.32e-11,8;CL:0002322,4.45e-09,5;CL:0000540,6.29e-08,6;CL:0000031,6.29e-08,6;CL:0000404,6.29e-08,6|ontology_enrichment_development_v019=CL:0000031;6.40e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.56e-20!82;UBERON:0005743!2.20e-18!86;UBERON:0000073!2.81e-18!94;UBERON:0001016!2.81e-18!94;UBERON:0000955!4.90e-14!69;UBERON:0006238!4.90e-14!69;UBERON:0002616!1.10e-13!59;UBERON:0001049!2.72e-13!57;UBERON:0005068!2.72e-13!57;UBERON:0006241!2.72e-13!57;UBERON:0007135!2.72e-13!57;UBERON:0002780!7.55e-10!41;UBERON:0001890!7.55e-10!41;UBERON:0006240!7.55e-10!41;UBERON:0002020!1.13e-09!34;UBERON:0003528!1.13e-09!34;UBERON:0001893!1.20e-09!34;UBERON:0001869!2.32e-09!32;UBERON:0003080!3.14e-09!42;UBERON:0003075!3.60e-09!86;UBERON:0007284!3.60e-09!86;UBERON:0002791!4.53e-09!33;UBERON:0002619!5.94e-09!22;UBERON:0000956!3.31e-08!25;UBERON:0000203!3.31e-08!25;UBERON:0001950!6.68e-08!20;UBERON:0002346!1.00e-07!90;UBERON:0004121!1.72e-07!169;UBERON:0000153!5.62e-07!129;UBERON:0007811!5.62e-07!129|ontology_enrichment_uberon_v019=UBERON:0002619;1.30e-25;22!UBERON:0001869;4.69e-23;32!UBERON:0001950;1.03e-22;20!UBERON:0000956;5.93e-22;25!UBERON:0000203;5.93e-22;25!UBERON:0002791;1.81e-21;32!UBERON:0001893;8.01e-21;34!UBERON:0003528;1.79e-20;34!UBERON:0002020;1.79e-20;34!UBERON:0002780;2.15e-16;41!UBERON:0001890;2.15e-16;41!UBERON:0000073;2.02e-15;53!UBERON:0002616;2.02e-15;53!UBERON:0001017;1.93e-12;75!UBERON:0000200;1.37e-11;6!UBERON:0000955;2.79e-11;68!UBERON:0001016;3.20e-11;83!UBERON:0001871;6.12e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.80e-33,81;UBERON:0001016,1.38e-31,89;UBERON:0001869,4.37e-27,32;UBERON:0000073,1.24e-26,53;UBERON:0002616,1.24e-26,53;UBERON:0001049,1.63e-26,56;UBERON:0005068,1.63e-26,56;UBERON:0006241,1.63e-26,56;UBERON:0007135,1.63e-26,56;UBERON:0002619,1.07e-25,22;UBERON:0001893,4.34e-25,34;UBERON:0003528,9.39e-25,34;UBERON:0002020,9.39e-25,34;UBERON:0002791,1.78e-24,32;UBERON:0000955,2.24e-24,68;UBERON:0006238,2.24e-24,68;UBERON:0002780,1.41e-23,41;UBERON:0001890,1.41e-23,41;UBERON:0003080,1.41e-23,41;UBERON:0006240,1.41e-23,41;UBERON:0001950,7.61e-23,20;UBERON:0000956,5.01e-22,25;UBERON:0000203,5.01e-22,25;UBERON:0003075,3.25e-17,82;UBERON:0007284,3.25e-17,82;UBERON:0002346,6.01e-16,86;UBERON:0003056,9.47e-16,61;UBERON:0011216,2.34e-14,223;UBERON:0004121,6.13e-13,171;UBERON:0000924,6.13e-13,171;UBERON:0006601,6.13e-13,171;UBERON:0000200,1.06e-11,6;UBERON:0010371,1.64e-11,104;UBERON:0010314,1.69e-10,132;UBERON:0007023,3.55e-09,114;UBERON:0000025,1.13e-07,192;UBERON:0001871,7.70e-07,6|phase1_expression=0,0,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,1.04474251279935,0.491467873003018,0,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0.975865597581014,0.984968464614303,0.408001382488506,0.626909442956176,0,0.684372125364421,0.251085279189606,0.764134057479513,0.410502947249729,0.708397031823113,0.786728553697808,0.767658796194425,0.928896739896456,0,0,0,1.23947520928483,0.426507697462265,0.587200878669695,0.553995408531877,0.601633342410425,0.217010870715852,0.447830948479849,0.32389366601898,0,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0,1.5369642391746,0.47296445977717,0,0,0,0.752969358170419,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0.989553900560148,0.797854630486527,3.83602275479425,0.290209238628584,0.56738522469114,1.24564449799115,1.25624332628372,1.0429658368404,0.217188844705117,1.21079900526674,0,0.949387162322653,0.422510572623884,0.212604299965044,0.209658645508376,0.561643155732475,0.150176892841506,0,0.285012743741249,0.59675003159727,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,1.68152568894461,0,1.180258620683,1.96505381374582,1.02800749499755,0,0.651844533267181,0.473447805734733,1.94826728407911,0,0.589211814949674,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0.296573126324121,0.535081656179426,0,0.113309342697566,1.53288197440768,0.68725489096526,0.506039384039006,0.318565414324097,0.651083453856419,0,0.451725357233318,0.127986611154418,0,0,0,2.82249440514625,2.40696176205157,2.02754165435919,0,0,0.767175371061182,0,0,0.144846518960824,0,0.486634870302636,1.22895262313288,0.221729397462564,0.351339142772504,0.785874452986276,0,0,0.97364218096405,0.174129737299267,0.132957960518865,0,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0.367663080345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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12490 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=57bp_to_ENST00000340573_5end | |||
|description=CAGE_peak_5_at_UBE2L6_5end | |||
|id=chr11:57335677..57335699,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.95e-08;5!CL:0000540;6.40e-08;6!CL:0000404;6.40e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.32e-11,8;CL:0002322,4.45e-09,5;CL:0000540,6.29e-08,6;CL:0000031,6.29e-08,6;CL:0000404,6.29e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.40e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;1.30e-25;22!UBERON:0001869;4.69e-23;32!UBERON:0001950;1.03e-22;20!UBERON:0000956;5.93e-22;25!UBERON:0000203;5.93e-22;25!UBERON:0002791;1.81e-21;32!UBERON:0001893;8.01e-21;34!UBERON:0003528;1.79e-20;34!UBERON:0002020;1.79e-20;34!UBERON:0002780;2.15e-16;41!UBERON:0001890;2.15e-16;41!UBERON:0000073;2.02e-15;53!UBERON:0002616;2.02e-15;53!UBERON:0001017;1.93e-12;75!UBERON:0000200;1.37e-11;6!UBERON:0000955;2.79e-11;68!UBERON:0001016;3.20e-11;83!UBERON:0001871;6.12e-07;6 | |||
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| |||
|short_description=p5@UBE2L6 | |||
}} |
Revision as of 18:10, 10 September 2013
Short description: | p5@UBE2L6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_UBE2L6_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENST00000340573_5end |
EntrezGene: | UBE2L6 |
HGNC: | 12490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.32e-11 | 8 |
embryonic stem cell | 4.45e-09 | 5 |
neuron | 6.29e-08 | 6 |
neuroblast | 6.29e-08 | 6 |
electrically signaling cell | 6.29e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.