FFCP PHASE1:Hg19::chr11:9088284..9088330,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57758|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30425|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000531429_5end|coexpression_cluster_id=C115|description=CAGE_peak_4_at_SCUBE2_5end|id=chr11:9088284..9088330,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;1.54e-29;1|ontology_enrichment_celltype_v019_2=CL:0002553,1.33e-29,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.81e-70!57;UBERON:0005068!1.81e-70!57;UBERON:0006241!1.81e-70!57;UBERON:0007135!1.81e-70!57;UBERON:0002780!2.84e-64!41;UBERON:0001890!2.84e-64!41;UBERON:0006240!2.84e-64!41;UBERON:0002616!6.10e-64!59;UBERON:0003080!1.35e-62!42;UBERON:0002020!5.01e-53!34;UBERON:0003528!5.01e-53!34;UBERON:0000955!1.24e-52!69;UBERON:0006238!1.24e-52!69;UBERON:0001893!1.90e-52!34;UBERON:0001869!3.23e-51!32;UBERON:0002791!9.00e-50!33;UBERON:0003075!1.90e-49!86;UBERON:0007284!1.90e-49!86;UBERON:0005743!8.91e-49!86;UBERON:0001017!1.22e-48!82;UBERON:0000073!2.07e-48!94;UBERON:0001016!2.07e-48!94;UBERON:0002346!7.48e-47!90;UBERON:0003056!4.09e-44!61;UBERON:0007023!1.13e-41!115;UBERON:0000033!1.67e-35!123;UBERON:0002619!1.74e-35!22;UBERON:0000153!2.00e-33!129;UBERON:0007811!2.00e-33!129;UBERON:0000956!6.42e-31!25;UBERON:0000203!6.42e-31!25;UBERON:0001950!1.70e-29!20;UBERON:0004121!5.06e-26!169;UBERON:0002420!2.21e-25!9;UBERON:0007245!2.21e-25!9;UBERON:0010009!2.21e-25!9;UBERON:0010011!2.21e-25!9;UBERON:0000454!2.21e-25!9;UBERON:0002308!2.67e-25!9;UBERON:0000125!2.67e-25!9;UBERON:0000924!3.36e-25!173;UBERON:0006601!3.36e-25!173;UBERON:0000349!1.24e-18!5;UBERON:0009663!1.35e-18!7;UBERON:0000025!4.52e-18!194;UBERON:0004111!9.53e-16!241;UBERON:0000369!2.88e-15!4;UBERON:0002435!2.88e-15!4;UBERON:0000204!2.88e-15!4;UBERON:0010082!2.88e-15!4;UBERON:0000200!2.37e-14!6;UBERON:0001894!6.32e-13!7;UBERON:0006222!6.32e-13!7;UBERON:0000477!1.43e-12!286;UBERON:0005383!4.56e-12!3;UBERON:0005382!4.56e-12!3;UBERON:0000988!2.20e-11!3;UBERON:0001871!2.78e-11!7;UBERON:0001872!4.95e-11!5;UBERON:0002298!7.70e-11!8;UBERON:0003076!2.72e-10!15;UBERON:0003057!2.72e-10!15;UBERON:0004733!8.22e-10!12;UBERON:0002028!8.22e-10!12;UBERON:0007277!8.22e-10!12;UBERON:0000483!2.39e-09!309;UBERON:0000064!2.88e-09!219;UBERON:0000119!3.61e-09!312;UBERON:0004732!5.27e-09!13;UBERON:0000475!5.40e-09!365;UBERON:0000007!7.39e-09!2;UBERON:0001876!1.20e-08!2;UBERON:0001873!1.49e-08!2;UBERON:0002148!1.49e-08!2;UBERON:0009662!1.49e-08!2;UBERON:0010122!1.49e-08!2;UBERON:0001954!1.72e-08!2;UBERON:0003022!1.72e-08!2;UBERON:0002421!1.72e-08!2;UBERON:0002600!1.72e-08!2;UBERON:0001870!2.85e-08!2;UBERON:0001875!2.85e-08!2;UBERON:0006514!2.85e-08!2;UBERON:0001897!4.69e-08!2|ontology_enrichment_uberon_v019=UBERON:0000007;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0001874;3.16e-29;1!UBERON:0000349;1.71e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0001954;1.66e-15;2!UBERON:0003022;1.66e-15;2!UBERON:0002421;1.66e-15;2!UBERON:0002600;1.66e-15;2!UBERON:0001876;2.37e-15;2!UBERON:0002148;2.37e-15;2!UBERON:0006331;2.37e-15;2!UBERON:0009662;2.37e-15;2!UBERON:0000073;8.61e-14;53!UBERON:0002616;8.61e-14;53!UBERON:0002780;1.25e-13;41!UBERON:0001890;1.25e-13;41!UBERON:0002420;1.80e-13;9!UBERON:0000125;1.80e-13;9!UBERON:0007245;1.80e-13;9!UBERON:0002308;1.80e-13;9!UBERON:0010009;1.80e-13;9!UBERON:0010011;1.80e-13;9!UBERON:0000454;1.80e-13;9!UBERON:0003528;2.48e-12;34!UBERON:0002020;2.48e-12;34!UBERON:0000988;1.09e-10;3!UBERON:0005383;1.09e-10;3!UBERON:0005382;1.09e-10;3!UBERON:0002791;1.02e-08;32!UBERON:0000369;2.43e-08;4!UBERON:0002435;2.43e-08;4!UBERON:0000204;2.43e-08;4!UBERON:0001869;8.03e-08;32!UBERON:0000955;1.63e-07;68!UBERON:0001893;2.27e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0001874,3.16e-29,1;UBERON:0000349,2.02e-23,5;UBERON:0000073,4.54e-19,53;UBERON:0002616,4.54e-19,53;UBERON:0001049,4.39e-18,56;UBERON:0005068,4.39e-18,56;UBERON:0006241,4.39e-18,56;UBERON:0007135,4.39e-18,56;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0002780,3.58e-17,41;UBERON:0001890,3.58e-17,41;UBERON:0003080,3.58e-17,41;UBERON:0006240,3.58e-17,41;UBERON:0001954,1.78e-15,2;UBERON:0003022,1.78e-15,2;UBERON:0002421,1.78e-15,2;UBERON:0002600,1.78e-15,2;UBERON:0002148,2.05e-15,2;UBERON:0006331,2.05e-15,2;UBERON:0009662,2.05e-15,2;UBERON:0001876,2.74e-15,2;UBERON:0000955,8.76e-15,68;UBERON:0006238,8.76e-15,68;UBERON:0000125,1.69e-13,9;UBERON:0002308,1.69e-13,9;UBERON:0002420,1.91e-13,9;UBERON:0007245,1.91e-13,9;UBERON:0010009,1.91e-13,9;UBERON:0010011,1.91e-13,9;UBERON:0000454,1.91e-13,9;UBERON:0003528,2.34e-13,34;UBERON:0002020,2.34e-13,34;UBERON:0001017,1.64e-12,81;UBERON:0003075,1.64e-12,82;UBERON:0007284,1.64e-12,82;UBERON:0002346,6.03e-12,86;UBERON:0003056,9.34e-12,61;UBERON:0001016,2.61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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57758 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30425 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000531429_5end | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_4_at_SCUBE2_5end | |||
|id=chr11:9088284..9088330,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.54e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.33e-29,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@SCUBE2 | |||
}} |
Revision as of 20:08, 10 September 2013
Short description: | p4@SCUBE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SCUBE2_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 0bp_to_ENST00000531429_5end |
EntrezGene: | SCUBE2 |
HGNC: | 30425 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.33e-29 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.