FFCP PHASE1:Hg19::chr12:111471962..111471975,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23316|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19347|TSSclassifier=S|UniProt=O14529|association_with_transcript=133bp_to_uc001tsa.1_5end|coexpression_cluster_id=C10|description=CAGE_peak_2_at_CUX2_5end|id=chr12:111471962..111471975,+|ontology_enrichment_celltype=CL:0000540!3.94e-12!6;CL:0000031!3.94e-12!6;CL:0000404!3.94e-12!6;CL:0000047!1.55e-11!8;CL:0002322!2.36e-10!5;CL:0002319!1.14e-07!25|ontology_enrichment_celltype_v019=CL:0002322;6.50e-16;5!CL:0002321;7.72e-15;15!CL:0000540;1.39e-13;6!CL:0000404;1.39e-13;6!CL:0000333;4.87e-09;5|ontology_enrichment_celltype_v019_2=CL:0002322,9.26e-16,5;CL:0000540,1.43e-13,6;CL:0000031,1.43e-13,6;CL:0000404,1.43e-13,6;CL:0000047,3.37e-10,8;CL:0000133,1.60e-07,59|ontology_enrichment_development_v019=CL:0000031;1.39e-13;6!UBERON:0006601;3.26e-09;82|ontology_enrichment_disease=DOID:3095!1.92e-09!22;DOID:2994!1.92e-09!22|ontology_enrichment_disease_v019=DOID:169;1.32e-07;6|ontology_enrichment_disease_v019_2=DOID:169,7.84e-08,6|ontology_enrichment_uberon=UBERON:0001017!8.03e-41!82;UBERON:0000073!1.31e-40!94;UBERON:0001016!1.31e-40!94;UBERON:0005743!5.74e-40!86;UBERON:0001869!2.72e-35!32;UBERON:0002780!2.96e-35!41;UBERON:0001890!2.96e-35!41;UBERON:0006240!2.96e-35!41;UBERON:0001893!2.96e-35!34;UBERON:0003080!3.35e-34!42;UBERON:0001049!1.04e-33!57;UBERON:0005068!1.04e-33!57;UBERON:0006241!1.04e-33!57;UBERON:0007135!1.04e-33!57;UBERON:0002791!1.24e-33!33;UBERON:0001950!6.62e-33!20;UBERON:0002619!1.14e-32!22;UBERON:0002020!1.45e-32!34;UBERON:0003528!1.45e-32!34;UBERON:0000955!4.49e-31!69;UBERON:0006238!4.49e-31!69;UBERON:0000956!1.07e-30!25;UBERON:0000203!1.07e-30!25;UBERON:0002616!4.39e-30!59;UBERON:0002346!1.10e-26!90;UBERON:0003056!1.23e-25!61;UBERON:0003075!1.59e-25!86;UBERON:0007284!1.59e-25!86;UBERON:0000924!5.15e-21!173;UBERON:0006601!5.15e-21!173;UBERON:0004121!6.32e-20!169;UBERON:0000033!2.33e-17!123;UBERON:0000153!6.43e-17!129;UBERON:0007811!6.43e-17!129;UBERON:0007023!8.48e-15!115;UBERON:0000200!2.61e-11!6;UBERON:0001871!4.88e-11!7;UBERON:0001872!2.85e-10!5;UBERON:0002021!7.86e-10!5;UBERON:0000473!1.30e-07!8;UBERON:0000922!2.21e-07!612;UBERON:0003101!3.23e-07!22;UBERON:0000079!3.23e-07!22;UBERON:0003135!4.27e-07!11|ontology_enrichment_uberon_v019=UBERON:0001950;4.11e-36;20!UBERON:0002619;9.95e-33;22!UBERON:0000956;1.25e-28;25!UBERON:0000203;1.25e-28;25!UBERON:0001869;6.85e-27;32!UBERON:0001893;5.33e-25;34!UBERON:0002791;8.96e-24;32!UBERON:0003528;2.50e-22;34!UBERON:0002020;2.50e-22;34!UBERON:0002780;7.17e-21;41!UBERON:0001890;7.17e-21;41!UBERON:0001872;1.05e-15;5!UBERON:0001870;9.81e-15;3!UBERON:0000073;5.85e-13;53!UBERON:0002616;5.85e-13;53!UBERON:0001017;3.20e-11;75!UBERON:0000955;6.34e-11;68!UBERON:0001016;7.75e-11;83!UBERON:0001905;2.13e-10;2!UBERON:0002702;2.13e-10;2!UBERON:0002757;2.13e-10;2!UBERON:0010134;2.13e-10;2!UBERON:0005408;2.13e-10;2!UBERON:0001899;2.13e-10;2!UBERON:0002021;1.51e-09;5!UBERON:0000922;3.90e-09;49!UBERON:0000013;4.87e-09;5!UBERON:0002410;4.87e-09;5!UBERON:0000200;1.32e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.50e-35,20;UBERON:0001016,1.08e-34,89;UBERON:0002619,3.22e-32,22;UBERON:0001017,1.99e-30,81;UBERON:0001869,5.86e-29,32;UBERON:0002780,8.24e-29,41;UBERON:0001890,8.24e-29,41;UBERON:0003080,8.24e-29,41;UBERON:0006240,8.24e-29,41;UBERON:0000956,3.51e-28,25;UBERON:0000203,3.51e-28,25;UBERON:0001893,4.10e-27,34;UBERON:0002791,3.60e-25,32;UBERON:0003528,1.48e-23,34;UBERON:0002020,1.48e-23,34;UBERON:0001049,8.18e-23,56;UBERON:0005068,8.18e-23,56;UBERON:0006241,8.18e-23,56;UBERON:0007135,8.18e-23,56;UBERON:0000073,1.50e-21,53;UBERON:0002616,1.50e-21,53;UBERON:0000955,2.63e-20,68;UBERON:0006238,2.63e-20,68;UBERON:0004121,2.71e-18,171;UBERON:0000924,2.71e-18,171;UBERON:0006601,2.71e-18,171;UBERON:0003056,2.82e-18,61;UBERON:0001872,2.14e-15,5;UBERON:0001870,1.22e-14,3;UBERON:0003075,2.13e-14,82;UBERON:0007284,2.13e-14,82;UBERON:0002346,1.49e-13,86;UBERON:0011216,1.56e-12,223;UBERON:0010371,5.49e-12,104;UBERON:0001905,8.96e-11,2;UBERON:0002757,8.96e-11,2;UBERON:0010134,8.96e-11,2;UBERON:0005408,8.96e-11,2;UBERON:0001899,8.96e-11,2;UBERON:0002702,2.36e-10,2;UBERON:0002021,1.78e-09,5;UBERON:0000013,2.59e-09,5;UBERON:0002410,2.59e-09,5;UBERON:0010314,1.42e-08,132;UBERON:0000200,1.65e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,3.04818467139416,1.16193942869518,0.621966330092223,1.51392510525377,3.28479623168247,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19347 | |||
|TSSclassifier=S | |||
|UniProt=O14529 | |||
|association_with_transcript=133bp_to_uc001tsa.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_CUX2_5end | |||
|id=chr12:111471962..111471975,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.94e-12!6;CL:0000031!3.94e-12!6;CL:0000404!3.94e-12!6;CL:0000047!1.55e-11!8;CL:0002322!2.36e-10!5;CL:0002319!1.14e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.50e-16;5!CL:0002321;7.72e-15;15!CL:0000540;1.39e-13;6!CL:0000404;1.39e-13;6!CL:0000333;4.87e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.26e-16,5;CL:0000540,1.43e-13,6;CL:0000031,1.43e-13,6;CL:0000404,1.43e-13,6;CL:0000047,3.37e-10,8;CL:0000133,1.60e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.39e-13;6!UBERON:0006601;3.26e-09;82 | |||
|ontology_enrichment_disease=DOID:3095!1.92e-09!22;DOID:2994!1.92e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:169;1.32e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.84e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.03e-41!82;UBERON:0000073!1.31e-40!94;UBERON:0001016!1.31e-40!94;UBERON:0005743!5.74e-40!86;UBERON:0001869!2.72e-35!32;UBERON:0002780!2.96e-35!41;UBERON:0001890!2.96e-35!41;UBERON:0006240!2.96e-35!41;UBERON:0001893!2.96e-35!34;UBERON:0003080!3.35e-34!42;UBERON:0001049!1.04e-33!57;UBERON:0005068!1.04e-33!57;UBERON:0006241!1.04e-33!57;UBERON:0007135!1.04e-33!57;UBERON:0002791!1.24e-33!33;UBERON:0001950!6.62e-33!20;UBERON:0002619!1.14e-32!22;UBERON:0002020!1.45e-32!34;UBERON:0003528!1.45e-32!34;UBERON:0000955!4.49e-31!69;UBERON:0006238!4.49e-31!69;UBERON:0000956!1.07e-30!25;UBERON:0000203!1.07e-30!25;UBERON:0002616!4.39e-30!59;UBERON:0002346!1.10e-26!90;UBERON:0003056!1.23e-25!61;UBERON:0003075!1.59e-25!86;UBERON:0007284!1.59e-25!86;UBERON:0000924!5.15e-21!173;UBERON:0006601!5.15e-21!173;UBERON:0004121!6.32e-20!169;UBERON:0000033!2.33e-17!123;UBERON:0000153!6.43e-17!129;UBERON:0007811!6.43e-17!129;UBERON:0007023!8.48e-15!115;UBERON:0000200!2.61e-11!6;UBERON:0001871!4.88e-11!7;UBERON:0001872!2.85e-10!5;UBERON:0002021!7.86e-10!5;UBERON:0000473!1.30e-07!8;UBERON:0000922!2.21e-07!612;UBERON:0003101!3.23e-07!22;UBERON:0000079!3.23e-07!22;UBERON:0003135!4.27e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.11e-36;20!UBERON:0002619;9.95e-33;22!UBERON:0000956;1.25e-28;25!UBERON:0000203;1.25e-28;25!UBERON:0001869;6.85e-27;32!UBERON:0001893;5.33e-25;34!UBERON:0002791;8.96e-24;32!UBERON:0003528;2.50e-22;34!UBERON:0002020;2.50e-22;34!UBERON:0002780;7.17e-21;41!UBERON:0001890;7.17e-21;41!UBERON:0001872;1.05e-15;5!UBERON:0001870;9.81e-15;3!UBERON:0000073;5.85e-13;53!UBERON:0002616;5.85e-13;53!UBERON:0001017;3.20e-11;75!UBERON:0000955;6.34e-11;68!UBERON:0001016;7.75e-11;83!UBERON:0001905;2.13e-10;2!UBERON:0002702;2.13e-10;2!UBERON:0002757;2.13e-10;2!UBERON:0010134;2.13e-10;2!UBERON:0005408;2.13e-10;2!UBERON:0001899;2.13e-10;2!UBERON:0002021;1.51e-09;5!UBERON:0000922;3.90e-09;49!UBERON:0000013;4.87e-09;5!UBERON:0002410;4.87e-09;5!UBERON:0000200;1.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.50e-35,20;UBERON:0001016,1.08e-34,89;UBERON:0002619,3.22e-32,22;UBERON:0001017,1.99e-30,81;UBERON:0001869,5.86e-29,32;UBERON:0002780,8.24e-29,41;UBERON:0001890,8.24e-29,41;UBERON:0003080,8.24e-29,41;UBERON:0006240,8.24e-29,41;UBERON:0000956,3.51e-28,25;UBERON:0000203,3.51e-28,25;UBERON:0001893,4.10e-27,34;UBERON:0002791,3.60e-25,32;UBERON:0003528,1.48e-23,34;UBERON:0002020,1.48e-23,34;UBERON:0001049,8.18e-23,56;UBERON:0005068,8.18e-23,56;UBERON:0006241,8.18e-23,56;UBERON:0007135,8.18e-23,56;UBERON:0000073,1.50e-21,53;UBERON:0002616,1.50e-21,53;UBERON:0000955,2.63e-20,68;UBERON:0006238,2.63e-20,68;UBERON:0004121,2.71e-18,171;UBERON:0000924,2.71e-18,171;UBERON:0006601,2.71e-18,171;UBERON:0003056,2.82e-18,61;UBERON:0001872,2.14e-15,5;UBERON:0001870,1.22e-14,3;UBERON:0003075,2.13e-14,82;UBERON:0007284,2.13e-14,82;UBERON:0002346,1.49e-13,86;UBERON:0011216,1.56e-12,223;UBERON:0010371,5.49e-12,104;UBERON:0001905,8.96e-11,2;UBERON:0002757,8.96e-11,2;UBERON:0010134,8.96e-11,2;UBERON:0005408,8.96e-11,2;UBERON:0001899,8.96e-11,2;UBERON:0002702,2.36e-10,2;UBERON:0002021,1.78e-09,5;UBERON:0000013,2.59e-09,5;UBERON:0002410,2.59e-09,5;UBERON:0010314,1.42e-08,132;UBERON:0000200,1.65e-07,6 | |||
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|short_description=p2@CUX2 | |||
}} |
Revision as of 20:53, 10 September 2013
Short description: | p2@CUX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CUX2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 133bp_to_uc001tsa.1_5end |
EntrezGene: | CUX2 |
HGNC: | 19347 |
UniProt: | O14529 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.26e-16 | 5 |
neuron | 1.43e-13 | 6 |
neuroblast | 1.43e-13 | 6 |
electrically signaling cell | 1.43e-13 | 6 |
neuronal stem cell | 3.37e-10 | 8 |
neurectodermal cell | 1.60e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.84e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.