FFCP PHASE1:Hg19::chr13:44794616..44794621,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3373|description=CAGE_peak_at_chr13:44794616..44794621,+|id=chr13:44794616..44794621,+|ontology_enrichment_celltype=CL:0000569!1.48e-17!4;CL:0000011!1.48e-17!4|ontology_enrichment_celltype_v019=CL:0000569;1.51e-57;4!CL:0000134;1.15e-16;55!CL:0000723;4.95e-16;61!CL:0000319;2.56e-15;1!CL:0002494;1.04e-14;16!CL:0000048;3.03e-13;58!CL:0000034;4.92e-11;69!CL:0000159;2.57e-08;2|ontology_enrichment_celltype_v019_2=CL:0000569,1.88e-57,4;CL:0000011,1.88e-57,4;CL:0000319,2.75e-15,1;CL:0002494,1.10e-14,16;CL:0000159,2.67e-08,2|ontology_enrichment_development_v019=CL:0000011;1.51e-57;4!UBERON:0003099;8.63e-16;1!UBERON:0003852;8.63e-16;1|ontology_enrichment_disease=DOID:2394!2.39e-33!14;DOID:120!3.96e-16!27;DOID:193!7.48e-15!29|ontology_enrichment_disease_v019=DOID:2394;9.25e-36;14!DOID:120;1.73e-18;27!DOID:193;3.36e-17;29!DOID:3030;2.56e-15;1|ontology_enrichment_disease_v019_2=DOID:2394,7.71e-36,14;DOID:120,1.58e-18,27;DOID:193,3.08e-17,29;DOID:3030,2.75e-15,1|ontology_enrichment_uberon=UBERON:0000992!8.55e-24!13;UBERON:0002118!1.14e-20!5;UBERON:0004532!1.14e-20!5;UBERON:0000991!4.49e-14!21;UBERON:0009196!4.49e-14!21;UBERON:0009117!4.49e-14!21;UBERON:0005564!4.49e-14!21;UBERON:0004176!2.34e-13!22;UBERON:0002119!6.68e-10!4;UBERON:0004531!6.68e-10!4;UBERON:0003134!5.62e-09!37;UBERON:0000474!5.62e-09!37;UBERON:0003100!6.51e-08!41;UBERON:0001048!1.15e-07!168;UBERON:0005156!3.43e-07!59;UBERON:0000990!3.43e-07!59|ontology_enrichment_uberon_v019=UBERON:0002118;6.31e-26;5!UBERON:0000992;1.35e-17;13!UBERON:0005705;8.63e-16;1!UBERON:0008193;8.63e-16;1!UBERON:0010912;8.63e-16;1!UBERON:0002514;8.63e-16;1!UBERON:0003457;8.63e-16;1!UBERON:0008907;8.63e-16;1!UBERON:0008001;8.63e-16;1!UBERON:0007213;8.63e-16;1!UBERON:0009891;8.63e-16;1!UBERON:0007914;8.63e-16;1!UBERON:0007375;8.63e-16;1!UBERON:0003323;8.63e-16;1!UBERON:0010258;8.63e-16;1!UBERON:0005253;8.63e-16;1!UBERON:0007842;8.63e-16;1!UBERON:0002397;8.63e-16;1!UBERON:0003113;8.63e-16;1!UBERON:0003277;8.63e-16;1!UBERON:0001709;8.63e-16;1!UBERON:0002244;8.63e-16;1!UBERON:0005620;8.63e-16;1!UBERON:0010364;8.63e-16;1!UBERON:0004288;8.63e-16;1!UBERON:0000991;5.13e-11;21!UBERON:0000948;8.95e-11;22!UBERON:0007100;1.64e-09;25!UBERON:0004089;1.50e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002118,4.68e-26,5;UBERON:0000992,1.08e-17,13;UBERON:0005705,8.63e-16,1;UBERON:0008193,8.63e-16,1;UBERON:0010912,8.63e-16,1;UBERON:0002514,8.63e-16,1;UBERON:0003457,8.63e-16,1;UBERON:0008907,8.63e-16,1;UBERON:0008001,8.63e-16,1;UBERON:0007213,8.63e-16,1;UBERON:0009891,8.63e-16,1;UBERON:0007914,8.63e-16,1;UBERON:0009292,8.63e-16,1;UBERON:0003099,8.63e-16,1;UBERON:0007375,8.63e-16,1;UBERON:0003323,8.63e-16,1;UBERON:0010258,8.63e-16,1;UBERON:0007842,8.63e-16,1;UBERON:0009494,8.63e-16,1;UBERON:0010042,8.63e-16,1;UBERON:0010045,8.63e-16,1;UBERON:0010259,8.63e-16,1;UBERON:0010359,8.63e-16,1;UBERON:0009526,8.63e-16,1;UBERON:0002397,8.63e-16,1;UBERON:0003113,8.63e-16,1;UBERON:0003277,8.63e-16,1;UBERON:0001709,8.63e-16,1;UBERON:0004066,8.63e-16,1;UBERON:0002244,8.63e-16,1;UBERON:0005620,8.63e-16,1;UBERON:0004362,8.63e-16,1;UBERON:0010364,8.63e-16,1;UBERON:0010046,8.63e-16,1;UBERON:0005868,8.63e-16,1;UBERON:0007238,8.63e-16,1;UBERON:0004288,8.63e-16,1;UBERON:0004068,8.63e-16,1;UBERON:0010334,8.63e-16,1;UBERON:0003852,8.63e-16,1;UBERON:0010253,8.63e-16,1;UBERON:0000991,4.50e-11,21;UBERON:0009196,4.50e-11,21;UBERON:0009117,4.50e-11,21;UBERON:0005564,4.50e-11,21;UBERON:0004176,1.39e-10,22;UBERON:0000948,6.98e-10,24;UBERON:0005498,6.98e-10,24;UBERON:0004140,6.98e-10,24;UBERON:0009881,6.98e-10,24;UBERON:0004141,6.98e-10,24;UBERON:0003084,6.98e-10,24;UBERON:0007005,6.98e-10,24;UBERON:0004139,6.98e-10,24;UBERON:0004291,6.98e-10,24;UBERON:0007100,8.24e-09,27;UBERON:0005253,1.50e-08,2;UBERON:0004089,1.50e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57504788195691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.572499546967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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3373 | |||
|description=CAGE_peak_at_chr13:44794616..44794621,+ | |||
|id=chr13:44794616..44794621,+ | |||
|ontology_enrichment_celltype=CL:0000569!1.48e-17!4;CL:0000011!1.48e-17!4 | |||
|ontology_enrichment_celltype_v019=CL:0000569;1.51e-57;4!CL:0000134;1.15e-16;55!CL:0000723;4.95e-16;61!CL:0000319;2.56e-15;1!CL:0002494;1.04e-14;16!CL:0000048;3.03e-13;58!CL:0000034;4.92e-11;69!CL:0000159;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,1.88e-57,4;CL:0000011,1.88e-57,4;CL:0000319,2.75e-15,1;CL:0002494,1.10e-14,16;CL:0000159,2.67e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000011;1.51e-57;4!UBERON:0003099;8.63e-16;1!UBERON:0003852;8.63e-16;1 | |||
|ontology_enrichment_disease=DOID:2394!2.39e-33!14;DOID:120!3.96e-16!27;DOID:193!7.48e-15!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.25e-36;14!DOID:120;1.73e-18;27!DOID:193;3.36e-17;29!DOID:3030;2.56e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.71e-36,14;DOID:120,1.58e-18,27;DOID:193,3.08e-17,29;DOID:3030,2.75e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0000992!8.55e-24!13;UBERON:0002118!1.14e-20!5;UBERON:0004532!1.14e-20!5;UBERON:0000991!4.49e-14!21;UBERON:0009196!4.49e-14!21;UBERON:0009117!4.49e-14!21;UBERON:0005564!4.49e-14!21;UBERON:0004176!2.34e-13!22;UBERON:0002119!6.68e-10!4;UBERON:0004531!6.68e-10!4;UBERON:0003134!5.62e-09!37;UBERON:0000474!5.62e-09!37;UBERON:0003100!6.51e-08!41;UBERON:0001048!1.15e-07!168;UBERON:0005156!3.43e-07!59;UBERON:0000990!3.43e-07!59 | |||
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|short_description=p@chr13:44794616..44794621,+ | |||
}} |
Revision as of 02:18, 11 September 2013
Short description: | p@chr13:44794616..44794621, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:44794616..44794621, + |
Coexpression cluster: | C3373_mesenchymal_Fibroblast_normal_Smooth_mucinous_Preadipocyte_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 1.88e-57 | 4 |
migratory trunk neural crest cell | 1.88e-57 | 4 |
mucus secreting cell | 2.75e-15 | 1 |
cardiocyte | 1.10e-14 | 16 |
seromucus secreting cell | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.71e-36 | 14 |
female reproductive organ cancer | 1.58e-18 | 27 |
reproductive organ cancer | 3.08e-17 | 29 |
mucinous adenocarcinoma | 2.75e-15 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.