FFCP PHASE1:Hg19::chr2:17773375..17773392,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7447|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12722|TSSclassifier=S|UniProt=|association_with_transcript=33bp_to_AB528541,DQ890800,DQ893955_5end|coexpression_cluster_id=C16|description=CAGE_peak_9_at_VSNL1_5end|id=chr2:17773375..17773392,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.74e-59!57;UBERON:0005068!5.74e-59!57;UBERON:0006241!5.74e-59!57;UBERON:0007135!5.74e-59!57;UBERON:0001893!3.35e-57!34;UBERON:0002619!1.47e-56!22;UBERON:0001869!3.31e-56!32;UBERON:0001950!1.06e-55!20;UBERON:0002780!7.65e-55!41;UBERON:0001890!7.65e-55!41;UBERON:0006240!7.65e-55!41;UBERON:0002791!5.90e-54!33;UBERON:0003080!2.08e-53!42;UBERON:0001017!3.30e-53!82;UBERON:0002616!5.68e-53!59;UBERON:0002020!1.88e-52!34;UBERON:0003528!1.88e-52!34;UBERON:0005743!2.24e-50!86;UBERON:0000955!3.18e-50!69;UBERON:0006238!3.18e-50!69;UBERON:0000956!1.88e-49!25;UBERON:0000203!1.88e-49!25;UBERON:0000073!1.69e-47!94;UBERON:0001016!1.69e-47!94;UBERON:0003075!4.63e-42!86;UBERON:0007284!4.63e-42!86;UBERON:0007023!3.73e-41!115;UBERON:0002346!7.73e-40!90;UBERON:0003056!5.87e-35!61;UBERON:0000033!1.19e-30!123;UBERON:0004121!4.68e-29!169;UBERON:0000153!7.65e-29!129;UBERON:0007811!7.65e-29!129;UBERON:0000924!3.57e-28!173;UBERON:0006601!3.57e-28!173;UBERON:0000200!1.35e-23!6;UBERON:0001871!4.00e-23!7;UBERON:0000025!2.01e-17!194;UBERON:0004111!2.47e-13!241;UBERON:0002771!4.53e-13!3;UBERON:0002021!6.71e-13!5;UBERON:0001872!9.08e-13!5;UBERON:0000349!3.66e-12!5;UBERON:0000477!9.87e-11!286;UBERON:0000064!1.08e-10!219;UBERON:0002420!4.68e-10!9;UBERON:0007245!4.68e-10!9;UBERON:0010009!4.68e-10!9;UBERON:0010011!4.68e-10!9;UBERON:0000454!4.68e-10!9;UBERON:0000483!3.09e-09!309;UBERON:0000475!4.13e-09!365;UBERON:0000119!4.60e-09!312;UBERON:0000369!7.99e-09!4;UBERON:0002435!7.99e-09!4;UBERON:0000204!7.99e-09!4;UBERON:0010082!7.99e-09!4;UBERON:0001870!9.09e-09!2;UBERON:0001876!2.01e-08!2;UBERON:0003076!3.13e-08!15;UBERON:0003057!3.13e-08!15;UBERON:0000062!1.36e-07!511;UBERON:0004733!2.12e-07!12;UBERON:0002028!2.12e-07!12;UBERON:0007277!2.12e-07!12;UBERON:0002298!2.63e-07!8;UBERON:0000481!3.10e-07!347;UBERON:0004732!8.30e-07!13|ontology_enrichment_uberon_v019=UBERON:0002619;7.65e-42;22!UBERON:0000956;5.72e-37;25!UBERON:0000203;5.72e-37;25!UBERON:0001950;2.79e-35;20!UBERON:0002771;4.96e-32;2!UBERON:0002021;8.80e-28;5!UBERON:0002791;2.11e-25;32!UBERON:0001869;2.11e-25;32!UBERON:0000200;6.70e-24;6!UBERON:0001893;1.30e-23;34!UBERON:0003528;3.20e-20;34!UBERON:0002020;3.20e-20;34!UBERON:0003112;1.78e-16;1!UBERON:0011158;1.78e-16;1!UBERON:0003128;1.78e-16;1!UBERON:0001703;1.78e-16;1!UBERON:0002241;1.78e-16;1!UBERON:0002780;2.09e-16;41!UBERON:0001890;2.09e-16;41!UBERON:0001017;1.37e-11;75!UBERON:0000073;1.72e-11;53!UBERON:0002616;1.72e-11;53!UBERON:0001871;7.15e-10;6!UBERON:0002702;4.52e-09;2!UBERON:0002360;6.67e-09;2!UBERON:0001954;6.67e-09;2!UBERON:0000094;6.67e-09;2!UBERON:0003022;6.67e-09;2!UBERON:0002421;6.67e-09;2!UBERON:0002600;6.67e-09;2!UBERON:0010743;6.67e-09;2!UBERON:0000955;1.08e-07;68!UBERON:0011216;5.01e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.53e-42,22;UBERON:0000956,6.30e-37,25;UBERON:0000203,6.30e-37,25;UBERON:0001950,3.17e-35,20;UBERON:0002771,5.37e-32,2;UBERON:0002791,5.32e-29,32;UBERON:0001869,5.32e-29,32;UBERON:0002021,1.11e-27,5;UBERON:0003528,2.57e-27,34;UBERON:0002020,2.57e-27,34;UBERON:0001893,2.57e-27,34;UBERON:0001017,2.07e-25,81;UBERON:0000200,6.70e-24,6;UBERON:0001016,7.84e-23,89;UBERON:0002780,1.11e-22,41;UBERON:0001890,1.11e-22,41;UBERON:0003080,1.11e-22,41;UBERON:0006240,1.11e-22,41;UBERON:0000073,4.12e-22,53;UBERON:0002616,4.12e-22,53;UBERON:0000955,6.13e-21,68;UBERON:0006238,6.13e-21,68;UBERON:0001049,6.53e-21,56;UBERON:0005068,6.53e-21,56;UBERON:0006241,6.53e-21,56;UBERON:0007135,6.53e-21,56;UBERON:0003112,1.21e-16,1;UBERON:0011158,1.21e-16,1;UBERON:0003128,1.21e-16,1;UBERON:0001703,1.21e-16,1;UBERON:0002241,1.21e-16,1;UBERON:0004761,1.21e-16,1;UBERON:0009617,1.21e-16,1;UBERON:0007023,3.16e-15,114;UBERON:0003056,3.49e-15,61;UBERON:0003075,3.95e-14,82;UBERON:0007284,3.95e-14,82;UBERON:0002346,1.92e-13,86;UBERON:0004121,1.43e-11,171;UBERON:0000924,1.43e-11,171;UBERON:0006601,1.43e-11,171;UBERON:0010371,5.33e-11,104;UBERON:0010314,1.44e-10,132;UBERON:0011216,2.85e-10,223;UBERON:0001871,7.31e-10,6;UBERON:0002702,4.34e-09,2;UBERON:0002360,5.08e-09,2;UBERON:0000094,5.08e-09,2;UBERON:0010743,5.08e-09,2;UBERON:0005253,5.49e-09,2;UBERON:0001954,6.42e-09,2;UBERON:0003022,6.42e-09,2;UBERON:0002421,6.42e-09,2;UBERON:0002600,6.42e-09,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12722 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=33bp_to_AB528541,DQ890800,DQ893955_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_9_at_VSNL1_5end | |||
|id=chr2:17773375..17773392,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.74e-59!57;UBERON:0005068!5.74e-59!57;UBERON:0006241!5.74e-59!57;UBERON:0007135!5.74e-59!57;UBERON:0001893!3.35e-57!34;UBERON:0002619!1.47e-56!22;UBERON:0001869!3.31e-56!32;UBERON:0001950!1.06e-55!20;UBERON:0002780!7.65e-55!41;UBERON:0001890!7.65e-55!41;UBERON:0006240!7.65e-55!41;UBERON:0002791!5.90e-54!33;UBERON:0003080!2.08e-53!42;UBERON:0001017!3.30e-53!82;UBERON:0002616!5.68e-53!59;UBERON:0002020!1.88e-52!34;UBERON:0003528!1.88e-52!34;UBERON:0005743!2.24e-50!86;UBERON:0000955!3.18e-50!69;UBERON:0006238!3.18e-50!69;UBERON:0000956!1.88e-49!25;UBERON:0000203!1.88e-49!25;UBERON:0000073!1.69e-47!94;UBERON:0001016!1.69e-47!94;UBERON:0003075!4.63e-42!86;UBERON:0007284!4.63e-42!86;UBERON:0007023!3.73e-41!115;UBERON:0002346!7.73e-40!90;UBERON:0003056!5.87e-35!61;UBERON:0000033!1.19e-30!123;UBERON:0004121!4.68e-29!169;UBERON:0000153!7.65e-29!129;UBERON:0007811!7.65e-29!129;UBERON:0000924!3.57e-28!173;UBERON:0006601!3.57e-28!173;UBERON:0000200!1.35e-23!6;UBERON:0001871!4.00e-23!7;UBERON:0000025!2.01e-17!194;UBERON:0004111!2.47e-13!241;UBERON:0002771!4.53e-13!3;UBERON:0002021!6.71e-13!5;UBERON:0001872!9.08e-13!5;UBERON:0000349!3.66e-12!5;UBERON:0000477!9.87e-11!286;UBERON:0000064!1.08e-10!219;UBERON:0002420!4.68e-10!9;UBERON:0007245!4.68e-10!9;UBERON:0010009!4.68e-10!9;UBERON:0010011!4.68e-10!9;UBERON:0000454!4.68e-10!9;UBERON:0000483!3.09e-09!309;UBERON:0000475!4.13e-09!365;UBERON:0000119!4.60e-09!312;UBERON:0000369!7.99e-09!4;UBERON:0002435!7.99e-09!4;UBERON:0000204!7.99e-09!4;UBERON:0010082!7.99e-09!4;UBERON:0001870!9.09e-09!2;UBERON:0001876!2.01e-08!2;UBERON:0003076!3.13e-08!15;UBERON:0003057!3.13e-08!15;UBERON:0000062!1.36e-07!511;UBERON:0004733!2.12e-07!12;UBERON:0002028!2.12e-07!12;UBERON:0007277!2.12e-07!12;UBERON:0002298!2.63e-07!8;UBERON:0000481!3.10e-07!347;UBERON:0004732!8.30e-07!13 | |||
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|short_description=p9@VSNL1 | |||
}} |
Revision as of 14:52, 12 September 2013
Short description: | p9@VSNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_VSNL1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 33bp_to_AB528541, DQ890800, DQ893955_5end |
EntrezGene: | VSNL1 |
HGNC: | 12722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.