FFCP PHASE1:Mm9::chr10:74429872..74429907,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14687|HGNC=|MCL_coexpression_id=1|UniProt=O70443|association_with_transcript=-14bp_to_ENSMUST00000037813_5end|description=CAGE_peak_1_at_Gnaz_5end|id=chr10:74429872..74429907,+|ontology_enrichment_celltype=CL:0000117!6.19e-13!23;CL:0000337!6.19e-13!23;CL:0000221!5.62e-12!44;CL:0000133!5.62e-12!44;CL:0002319!1.30e-11!43;CL:0000540!1.80e-11!33;CL:0000047!1.80e-11!33;CL:0000031!1.80e-11!33;CL:0000404!1.80e-11!33;CL:0000055!7.99e-10!50;CL:0000393!2.49e-09!39;CL:0000211!2.49e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-16,23;CL:0000337,1.03e-16,23;CL:0000540,3.19e-13,33;CL:0000047,3.19e-13,33;CL:0000031,3.19e-13,33;CL:0000404,3.19e-13,33;CL:0000221,3.54e-13,44;CL:0000133,3.54e-13,44;CL:0002319,1.03e-12,43;CL:0000393,1.38e-09,39;CL:0000211,1.38e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.75e-30!73;UBERON:0005743!1.75e-30!73;UBERON:0000073!6.99e-30!75;UBERON:0001016!6.99e-30!75;UBERON:0002346!1.98e-27!71;UBERON:0003075!1.98e-27!71;UBERON:0007284!1.98e-27!71;UBERON:0001049!2.59e-27!52;UBERON:0005068!2.59e-27!52;UBERON:0006241!2.59e-27!52;UBERON:0007135!2.59e-27!52;UBERON:0000033!1.09e-26!63;UBERON:0000955!8.19e-26!50;UBERON:0006238!8.19e-26!50;UBERON:0002616!3.26e-25!49;UBERON:0004121!3.66e-25!102;UBERON:0000924!3.66e-25!102;UBERON:0006601!3.66e-25!102;UBERON:0003056!5.36e-23!49;UBERON:0003080!1.58e-21!40;UBERON:0002780!5.73e-21!39;UBERON:0001890!5.73e-21!39;UBERON:0006240!5.73e-21!39;UBERON:0002020!2.81e-20!34;UBERON:0002791!3.89e-17!29;UBERON:0003528!3.89e-17!29;UBERON:0001893!3.89e-17!29;UBERON:0000956!2.61e-12!21;UBERON:0001869!2.61e-12!21;UBERON:0000203!2.61e-12!21;UBERON:0002619!6.56e-11!17;UBERON:0007811!3.36e-10!86;UBERON:0000153!8.08e-09!94;UBERON:0002021!2.95e-08!10;UBERON:0000411!2.95e-08!10;UBERON:0001950!2.95e-08!10;UBERON:0004111!3.05e-07!122;UBERON:0000025!3.89e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.75e-38,73;UBERON:0000073,7.86e-37,54;UBERON:0001016,2.70e-36,75;UBERON:0001049,4.26e-35,52;UBERON:0005068,4.26e-35,52;UBERON:0006241,4.26e-35,52;UBERON:0007135,4.26e-35,52;UBERON:0002346,5.31e-35,64;UBERON:0003075,5.31e-35,64;UBERON:0007284,5.31e-35,64;UBERON:0004121,5.39e-32,95;UBERON:0000924,5.39e-32,95;UBERON:0006601,5.39e-32,95;UBERON:0000955,1.13e-30,47;UBERON:0006238,1.13e-30,47;UBERON:0010371,3.27e-30,73;UBERON:0002616,6.89e-30,46;UBERON:0003056,2.46e-29,49;UBERON:0003080,3.46e-28,40;UBERON:0002780,1.94e-27,39;UBERON:0001890,1.94e-27,39;UBERON:0006240,1.94e-27,39;UBERON:0002020,1.62e-26,34;UBERON:0003528,2.54e-22,29;UBERON:0002791,2.54e-22,29;UBERON:0001893,2.54e-22,29;UBERON:0010314,7.30e-20,92;UBERON:0000956,7.00e-16,21;UBERON:0001869,7.00e-16,21;UBERON:0000203,7.00e-16,21;UBERON:0002619,5.14e-14,17;UBERON:0002021,1.74e-10,10;UBERON:0000411,1.74e-10,10;UBERON:0001950,1.74e-10,10;UBERON:0000025,3.06e-08,114;UBERON:0004111,4.40e-08,122;UBERON:0002420,1.40e-07,8;UBERON:0007245,1.40e-07,8;UBERON:0010009,1.40e-07,8;UBERON:0010011,1.40e-07,8;UBERON:0000454,1.40e-07,8;UBERON:0003076,3.06e-07,12;UBERON:0003057,3.06e-07,12|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0,0,2.38121212422995,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0.367093504323363,0.782391344348039,1.30815093828268,2.85592037554813,1.1665793944457,1.25987779462826,0,0,0,0,0.514518872071894,0,0.515672092277442,7.89034197352431,8.46385566835253,6.33831403506179,0.677689064138264,1.77858959222228,0,0,0.7104801149461,1.79760066311043,3.84218305321555,1.14058573539325,2.56511282830212,3.15487442027073,8.56952953211411,8.61387309711293,3.30725157880376,2.20444583341944,4.5960939330501,5.50579404996943,6.76742891851495,5.22262213071228,11.6059933202571,11.4359554503012,9.37644067002168,6.42120897703176,3.93933827022176,5.50073691996516,6.77645746589436,9.25415925194169,10.6247684120421,0.227178579999552,0.982430281388212,0.579728977403356,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0.258937883647172,1.92974780784272,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0.940709657085638,0.753999547978053,0,0.86759614151947,2.65383165584962,0.161766849947409,0.441683036920787,1.45462575940567,0,3.51336956413857,2.72280718857492,0,0.239630249011841,0.599902730993408,0,4.79330046095433,11.4375150704657,14.0732874366408,15.8180131374972,19.9458056717658,4.57133698031032,8.4365456795234,1.12023300235348,0.870848794270651,0,0.841767423545896,1.04096354370163,1.14951052216736,1.62055916824814,1.05493372485001,1.97305847538851,1.5373646434182,1.87403449119458,3.3631438196072,1.5089759505299,0.567318240503458,0.703804496655795,0.876782929710299,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0.710234206755631,0.787056926989615,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| ||
|EntrezGene=14687 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=O70443 | |||
|association_with_transcript=-14bp_to_ENSMUST00000037813_5end | |||
|description=CAGE_peak_1_at_Gnaz_5end | |||
|id=chr10:74429872..74429907,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.19e-13!23;CL:0000337!6.19e-13!23;CL:0000221!5.62e-12!44;CL:0000133!5.62e-12!44;CL:0002319!1.30e-11!43;CL:0000540!1.80e-11!33;CL:0000047!1.80e-11!33;CL:0000031!1.80e-11!33;CL:0000404!1.80e-11!33;CL:0000055!7.99e-10!50;CL:0000393!2.49e-09!39;CL:0000211!2.49e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-16,23;CL:0000337,1.03e-16,23;CL:0000540,3.19e-13,33;CL:0000047,3.19e-13,33;CL:0000031,3.19e-13,33;CL:0000404,3.19e-13,33;CL:0000221,3.54e-13,44;CL:0000133,3.54e-13,44;CL:0002319,1.03e-12,43;CL:0000393,1.38e-09,39;CL:0000211,1.38e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.75e-30!73;UBERON:0005743!1.75e-30!73;UBERON:0000073!6.99e-30!75;UBERON:0001016!6.99e-30!75;UBERON:0002346!1.98e-27!71;UBERON:0003075!1.98e-27!71;UBERON:0007284!1.98e-27!71;UBERON:0001049!2.59e-27!52;UBERON:0005068!2.59e-27!52;UBERON:0006241!2.59e-27!52;UBERON:0007135!2.59e-27!52;UBERON:0000033!1.09e-26!63;UBERON:0000955!8.19e-26!50;UBERON:0006238!8.19e-26!50;UBERON:0002616!3.26e-25!49;UBERON:0004121!3.66e-25!102;UBERON:0000924!3.66e-25!102;UBERON:0006601!3.66e-25!102;UBERON:0003056!5.36e-23!49;UBERON:0003080!1.58e-21!40;UBERON:0002780!5.73e-21!39;UBERON:0001890!5.73e-21!39;UBERON:0006240!5.73e-21!39;UBERON:0002020!2.81e-20!34;UBERON:0002791!3.89e-17!29;UBERON:0003528!3.89e-17!29;UBERON:0001893!3.89e-17!29;UBERON:0000956!2.61e-12!21;UBERON:0001869!2.61e-12!21;UBERON:0000203!2.61e-12!21;UBERON:0002619!6.56e-11!17;UBERON:0007811!3.36e-10!86;UBERON:0000153!8.08e-09!94;UBERON:0002021!2.95e-08!10;UBERON:0000411!2.95e-08!10;UBERON:0001950!2.95e-08!10;UBERON:0004111!3.05e-07!122;UBERON:0000025!3.89e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.75e-38,73;UBERON:0000073,7.86e-37,54;UBERON:0001016,2.70e-36,75;UBERON:0001049,4.26e-35,52;UBERON:0005068,4.26e-35,52;UBERON:0006241,4.26e-35,52;UBERON:0007135,4.26e-35,52;UBERON:0002346,5.31e-35,64;UBERON:0003075,5.31e-35,64;UBERON:0007284,5.31e-35,64;UBERON:0004121,5.39e-32,95;UBERON:0000924,5.39e-32,95;UBERON:0006601,5.39e-32,95;UBERON:0000955,1.13e-30,47;UBERON:0006238,1.13e-30,47;UBERON:0010371,3.27e-30,73;UBERON:0002616,6.89e-30,46;UBERON:0003056,2.46e-29,49;UBERON:0003080,3.46e-28,40;UBERON:0002780,1.94e-27,39;UBERON:0001890,1.94e-27,39;UBERON:0006240,1.94e-27,39;UBERON:0002020,1.62e-26,34;UBERON:0003528,2.54e-22,29;UBERON:0002791,2.54e-22,29;UBERON:0001893,2.54e-22,29;UBERON:0010314,7.30e-20,92;UBERON:0000956,7.00e-16,21;UBERON:0001869,7.00e-16,21;UBERON:0000203,7.00e-16,21;UBERON:0002619,5.14e-14,17;UBERON:0002021,1.74e-10,10;UBERON:0000411,1.74e-10,10;UBERON:0001950,1.74e-10,10;UBERON:0000025,3.06e-08,114;UBERON:0004111,4.40e-08,122;UBERON:0002420,1.40e-07,8;UBERON:0007245,1.40e-07,8;UBERON:0010009,1.40e-07,8;UBERON:0010011,1.40e-07,8;UBERON:0000454,1.40e-07,8;UBERON:0003076,3.06e-07,12;UBERON:0003057,3.06e-07,12 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0,0,2.38121212422995,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0.367093504323363,0.782391344348039,1.30815093828268,2.85592037554813,1.1665793944457,1.25987779462826,0,0,0,0,0.514518872071894,0,0.515672092277442,7.89034197352431,8.46385566835253,6.33831403506179,0.677689064138264,1.77858959222228,0,0,0.7104801149461,1.79760066311043,3.84218305321555,1.14058573539325,2.56511282830212,3.15487442027073,8.56952953211411,8.61387309711293,3.30725157880376,2.20444583341944,4.5960939330501,5.50579404996943,6.76742891851495,5.22262213071228,11.6059933202571,11.4359554503012,9.37644067002168,6.42120897703176,3.93933827022176,5.50073691996516,6.77645746589436,9.25415925194169,10.6247684120421,0.227178579999552,0.982430281388212,0.579728977403356,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0.258937883647172,1.92974780784272,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0.940709657085638,0.753999547978053,0,0.86759614151947,2.65383165584962,0.161766849947409,0.441683036920787,1.45462575940567,0,3.51336956413857,2.72280718857492,0,0.239630249011841,0.599902730993408,0,4.79330046095433,11.4375150704657,14.0732874366408,15.8180131374972,19.9458056717658,4.57133698031032,8.4365456795234,1.12023300235348,0.870848794270651,0,0.841767423545896,1.04096354370163,1.14951052216736,1.62055916824814,1.05493372485001,1.97305847538851,1.5373646434182,1.87403449119458,3.3631438196072,1.5089759505299,0.567318240503458,0.703804496655795,0.876782929710299,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0.710234206755631,0.787056926989615,0,0,0.536546802799238,0.116765342367169,0,0.164167464079095,0.891756905004413,0.438599962275997,0.439100230582101,0.805238512562231,9.46304768538573,7.20332286654991,0,0,0.639864751605702,1.16118335930219,0.77320476793256,0.201683524623343,0.22237804384487,0.380451252225118,0,0.164698954724011,0.754005626400808,0.198956472041151,0.974820435595601,0.898819408654221,0.216138049874694,0,0.948339504765408,0.571242563048644,1.1270773567308,0.610953983535943,0.775809948670503,1.19230893813542,1.13825766823663,0.590440591918409,0.784993639206874,0.863780147452604,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,1.47802552133284,0.568474235311454,0.651859905768103,1.01847051465113,0,0.335012514883631,1.19021820443007,0.195133647857799,0.472905432318573,1.32878813789265,0.956728611944923,1.14704320301017,0.690739927463582,0.144649058581512,0,0,0,0.551873492609465,2.72936002979246,4.33683240391152,0,0.504941854408746,0.631016438832513,0.780877488593277,1.50796378412959,1.43381278771531,0,1.13230612315533,0.404810701674894,0.876767573733936,1.18586333383957,5.46246237917072,1.27746076687442,0.890328018336276,1.46598263418218,1.15479086080775,0,0.485561272309963,0.302323556964751,0.188605079755898,1.18120757152309,1.84461088766356,0.516856586336442,0.727067458955011,0.356497378384721,0.632073515871632,0,2.06271086496374,1.70219802876894,1.08036656418786,3.10460841078611,1.92903331528433,2.48276327099183,3.21063871683727,2.63278432963394,3.04464949114599,0,0.21183207086382,0.661585194164886,0.16488625294148,0,0.422190474497091,0.119372344003136,0,0.582961673259701,4.07935664423121,0.341741761595705,1.65109494370578,0,0.188368457004691,0.683471138605126,0.228778173206523,0.169978429993855,0.279902904647316,0.552799895217695,0,0.316335993581135,1.21991680276109,1.40406943068342,0.627264888043406,0.87345025498471,1.34864346384821,0.991841468704031,1.30877970992015,0.388844919875379,0,2.25477175473676,0.598066184175915,0.496375471371293,1.36115831840833,0.258319646955462,0.506868376472335,0.704143431874524,2.0832701575032,2.51662426621706,0.966336483304024,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0.192423683280659,0,0.453460767230423,0.221985953374065,0.448569283047378,0.335769232728157,1.9318959403219,1.50145980360946,1.64836461840539,0.214368379079066,0.501572104035363,17.5073071211291,23.0162618253588,17.7597609166213,15.9823459579629,14.3867329151835,21.9064230243013,20.925697507186,14.4102785031751,12.6879874515577,18.6393712230655,0.93408612825759,2.39414924040619,0.853668028770671,0.729320151204882,1.25767897576789,3.8607136774503,0.888986911206461,1.23621034343337,2.24643446714271,1.51618327058278,1.52087579934144,1.32038438970253,0.936415074698824,1.28050304809739,1.20614484806788,2.38146845641537,2.20180219295225,1.54327376370964,1.23625770240992,0.588795680537589,1.37147700954166,2.12970967391205,1.43061713968393,1.30811774969096,1.03520318456864,1.35383372626682,1.82927972872773,1.05227884575137,0.814824683075171,1.12228454331548,2.60997039873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| |||
|short_description=p1@Gnaz | |||
}} |
Revision as of 17:20, 12 September 2013
Short description: | p1@Gnaz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gnaz_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -14bp_to_ENSMUST00000037813_5end |
EntrezGene: | Gnaz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.03e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.03e-16 | 23 |
neuron | 3.19e-13 | 33 |
neuronal stem cell | 3.19e-13 | 33 |
neuroblast | 3.19e-13 | 33 |
electrically signaling cell | 3.19e-13 | 33 |
ectodermal cell | 3.54e-13 | 44 |
neurectodermal cell | 3.54e-13 | 44 |
neural cell | 1.03e-12 | 43 |
electrically responsive cell | 1.38e-09 | 39 |
electrically active cell | 1.38e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.