FFCP PHASE1:Mm9::chr11:16951979..16951999,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=380686|HGNC=|MCL_coexpression_id=2|UniProt=Q5M8N0|association_with_transcript=42bp_to_NM_029861,uc007iby.1_5end|description=CAGE_peak_3_at_Cnrip1_5end|id=chr11:16951979..16951999,+|ontology_enrichment_celltype=CL:0000540!1.46e-16!33;CL:0000047!1.46e-16!33;CL:0000031!1.46e-16!33;CL:0000404!1.46e-16!33;CL:0000393!3.83e-16!39;CL:0000211!3.83e-16!39;CL:0000221!1.87e-15!44;CL:0000133!1.87e-15!44;CL:0002319!2.49e-15!43;CL:0000055!1.55e-14!50;CL:0000117!7.11e-14!23;CL:0000337!7.11e-14!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-22,23;CL:0000337,4.54e-22,23;CL:0000540,1.80e-21,33;CL:0000047,1.80e-21,33;CL:0000031,1.80e-21,33;CL:0000404,1.80e-21,33;CL:0000393,1.19e-16,39;CL:0000211,1.19e-16,39;CL:0002319,1.23e-16,43;CL:0000221,4.99e-16,44;CL:0000133,4.99e-16,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.23e-31!73;UBERON:0005743!1.23e-31!73;UBERON:0000073!3.36e-31!75;UBERON:0001016!3.36e-31!75;UBERON:0004121!5.91e-27!102;UBERON:0000924!5.91e-27!102;UBERON:0006601!5.91e-27!102;UBERON:0002346!3.83e-24!71;UBERON:0003075!3.83e-24!71;UBERON:0007284!3.83e-24!71;UBERON:0001049!8.82e-23!52;UBERON:0005068!8.82e-23!52;UBERON:0006241!8.82e-23!52;UBERON:0007135!8.82e-23!52;UBERON:0000033!3.03e-21!63;UBERON:0000955!3.46e-21!50;UBERON:0006238!3.46e-21!50;UBERON:0002616!1.51e-20!49;UBERON:0002020!2.40e-20!34;UBERON:0003056!2.94e-18!49;UBERON:0003080!1.50e-17!40;UBERON:0002780!5.47e-17!39;UBERON:0001890!5.47e-17!39;UBERON:0006240!5.47e-17!39;UBERON:0002791!7.20e-17!29;UBERON:0003528!7.20e-17!29;UBERON:0001893!7.20e-17!29;UBERON:0000956!2.71e-12!21;UBERON:0001869!2.71e-12!21;UBERON:0000203!2.71e-12!21;UBERON:0002619!1.88e-10!17;UBERON:0007811!6.24e-09!86;UBERON:0002021!1.62e-08!10;UBERON:0000411!1.62e-08!10;UBERON:0001950!1.62e-08!10;UBERON:0000153!2.44e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.10e-40,73;UBERON:0001016,3.06e-38,75;UBERON:0000073,1.36e-33,54;UBERON:0002346,1.77e-33,64;UBERON:0003075,1.77e-33,64;UBERON:0007284,1.77e-33,64;UBERON:0004121,4.19e-33,95;UBERON:0000924,4.19e-33,95;UBERON:0006601,4.19e-33,95;UBERON:0001049,1.83e-31,52;UBERON:0005068,1.83e-31,52;UBERON:0006241,1.83e-31,52;UBERON:0007135,1.83e-31,52;UBERON:0002020,1.05e-30,34;UBERON:0010371,3.01e-27,73;UBERON:0000955,5.13e-26,47;UBERON:0006238,5.13e-26,47;UBERON:0002616,5.10e-25,46;UBERON:0003528,5.80e-25,29;UBERON:0002791,5.80e-25,29;UBERON:0001893,5.80e-25,29;UBERON:0003056,4.05e-24,49;UBERON:0003080,4.25e-23,40;UBERON:0002780,3.35e-22,39;UBERON:0001890,3.35e-22,39;UBERON:0006240,3.35e-22,39;UBERON:0010314,3.27e-18,92;UBERON:0000956,2.14e-17,21;UBERON:0001869,2.14e-17,21;UBERON:0000203,2.14e-17,21;UBERON:0002619,2.53e-14,17;UBERON:0002021,3.82e-13,10;UBERON:0000411,3.82e-13,10;UBERON:0001950,3.82e-13,10;UBERON:0002420,1.15e-08,8;UBERON:0007245,1.15e-08,8;UBERON:0010009,1.15e-08,8;UBERON:0010011,1.15e-08,8;UBERON:0000454,1.15e-08,8;UBERON:0003076,1.17e-08,12;UBERON:0003057,1.17e-08,12;UBERON:0002240,1.21e-07,6;UBERON:0005174,1.21e-07,6;UBERON:0001137,1.21e-07,6;UBERON:0000025,2.06e-07,114;UBERON:0001948,7.00e-07,5;UBERON:0002315,7.00e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,1.87095238332354,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.734187008646726,0,0.436050312760893,0.659058548203415,0.388859798148567,0.279972843250725,2.87505128729943,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,5.05791152148994,7.93486468908049,3.80298842103708,0.677689064138264,0,0.449949858640699,0,1.4209602298922,1.19840044207362,0.384218305321555,1.55534418462716,1.89008313664367,1.68259969081106,9.14083150092171,11.0434270475807,1.71487118900936,1.43768206527355,1.83843757322004,3.30347642998166,5.61824287574826,3.99376986466233,5.67111037239834,5.30628332893976,8.85552729946492,3.62937898701795,4.50210088025344,6.26472815884921,14.142172102736,10.2507610175354,5.96478226640962,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,0.823120949949934,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,3.80615036115011,3.56059401582874,0,0.11981512450592,0,0,3.44518470631092,2.74500361691176,1.7591609295801,9.73416193076748,13.2972037811772,3.1168206683934,4.86723789203273,1.12023300235348,0.497627882440372,0,0,0.390361328888111,0.229902104433473,1.26043490863744,1.20563854268572,1.49680298132921,1.0249097622788,1.40552586839593,1.55222022443409,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0.243206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| ||
|EntrezGene=380686 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q5M8N0 | |||
|association_with_transcript=42bp_to_NM_029861,uc007iby.1_5end | |||
|description=CAGE_peak_3_at_Cnrip1_5end | |||
|id=chr11:16951979..16951999,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.46e-16!33;CL:0000047!1.46e-16!33;CL:0000031!1.46e-16!33;CL:0000404!1.46e-16!33;CL:0000393!3.83e-16!39;CL:0000211!3.83e-16!39;CL:0000221!1.87e-15!44;CL:0000133!1.87e-15!44;CL:0002319!2.49e-15!43;CL:0000055!1.55e-14!50;CL:0000117!7.11e-14!23;CL:0000337!7.11e-14!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-22,23;CL:0000337,4.54e-22,23;CL:0000540,1.80e-21,33;CL:0000047,1.80e-21,33;CL:0000031,1.80e-21,33;CL:0000404,1.80e-21,33;CL:0000393,1.19e-16,39;CL:0000211,1.19e-16,39;CL:0002319,1.23e-16,43;CL:0000221,4.99e-16,44;CL:0000133,4.99e-16,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-31!73;UBERON:0005743!1.23e-31!73;UBERON:0000073!3.36e-31!75;UBERON:0001016!3.36e-31!75;UBERON:0004121!5.91e-27!102;UBERON:0000924!5.91e-27!102;UBERON:0006601!5.91e-27!102;UBERON:0002346!3.83e-24!71;UBERON:0003075!3.83e-24!71;UBERON:0007284!3.83e-24!71;UBERON:0001049!8.82e-23!52;UBERON:0005068!8.82e-23!52;UBERON:0006241!8.82e-23!52;UBERON:0007135!8.82e-23!52;UBERON:0000033!3.03e-21!63;UBERON:0000955!3.46e-21!50;UBERON:0006238!3.46e-21!50;UBERON:0002616!1.51e-20!49;UBERON:0002020!2.40e-20!34;UBERON:0003056!2.94e-18!49;UBERON:0003080!1.50e-17!40;UBERON:0002780!5.47e-17!39;UBERON:0001890!5.47e-17!39;UBERON:0006240!5.47e-17!39;UBERON:0002791!7.20e-17!29;UBERON:0003528!7.20e-17!29;UBERON:0001893!7.20e-17!29;UBERON:0000956!2.71e-12!21;UBERON:0001869!2.71e-12!21;UBERON:0000203!2.71e-12!21;UBERON:0002619!1.88e-10!17;UBERON:0007811!6.24e-09!86;UBERON:0002021!1.62e-08!10;UBERON:0000411!1.62e-08!10;UBERON:0001950!1.62e-08!10;UBERON:0000153!2.44e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.10e-40,73;UBERON:0001016,3.06e-38,75;UBERON:0000073,1.36e-33,54;UBERON:0002346,1.77e-33,64;UBERON:0003075,1.77e-33,64;UBERON:0007284,1.77e-33,64;UBERON:0004121,4.19e-33,95;UBERON:0000924,4.19e-33,95;UBERON:0006601,4.19e-33,95;UBERON:0001049,1.83e-31,52;UBERON:0005068,1.83e-31,52;UBERON:0006241,1.83e-31,52;UBERON:0007135,1.83e-31,52;UBERON:0002020,1.05e-30,34;UBERON:0010371,3.01e-27,73;UBERON:0000955,5.13e-26,47;UBERON:0006238,5.13e-26,47;UBERON:0002616,5.10e-25,46;UBERON:0003528,5.80e-25,29;UBERON:0002791,5.80e-25,29;UBERON:0001893,5.80e-25,29;UBERON:0003056,4.05e-24,49;UBERON:0003080,4.25e-23,40;UBERON:0002780,3.35e-22,39;UBERON:0001890,3.35e-22,39;UBERON:0006240,3.35e-22,39;UBERON:0010314,3.27e-18,92;UBERON:0000956,2.14e-17,21;UBERON:0001869,2.14e-17,21;UBERON:0000203,2.14e-17,21;UBERON:0002619,2.53e-14,17;UBERON:0002021,3.82e-13,10;UBERON:0000411,3.82e-13,10;UBERON:0001950,3.82e-13,10;UBERON:0002420,1.15e-08,8;UBERON:0007245,1.15e-08,8;UBERON:0010009,1.15e-08,8;UBERON:0010011,1.15e-08,8;UBERON:0000454,1.15e-08,8;UBERON:0003076,1.17e-08,12;UBERON:0003057,1.17e-08,12;UBERON:0002240,1.21e-07,6;UBERON:0005174,1.21e-07,6;UBERON:0001137,1.21e-07,6;UBERON:0000025,2.06e-07,114;UBERON:0001948,7.00e-07,5;UBERON:0002315,7.00e-07,5 | |||
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|short_description=p3@Cnrip1 | |||
}} |
Revision as of 19:11, 12 September 2013
Short description: | p3@Cnrip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cnrip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 42bp_to_NM_029861, uc007iby.1_5end |
EntrezGene: | Cnrip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.54e-22 | 23 |
neuroblast (sensu Vertebrata) | 4.54e-22 | 23 |
neuron | 1.80e-21 | 33 |
neuronal stem cell | 1.80e-21 | 33 |
neuroblast | 1.80e-21 | 33 |
electrically signaling cell | 1.80e-21 | 33 |
electrically responsive cell | 1.19e-16 | 39 |
electrically active cell | 1.19e-16 | 39 |
neural cell | 1.23e-16 | 43 |
ectodermal cell | 4.99e-16 | 44 |
neurectodermal cell | 4.99e-16 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.