FFCP PHASE1:Hg19::chr3:48541537..48541621,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |||
|TSSclassifier=S | |||
|UniProt=F8WCE2,C9IZ46,F8WFD9,F8WDS1,F8W9N8 | |||
|association_with_transcript=0bp_to_ENST00000415268,ENST00000417841,ENST00000424965,ENST00000441507,ENST00000443308_5end | |||
|description=CAGE_peak_3_at_SHISA5_5end | |||
|id=chr3:48541537..48541621,- | |||
|ontology_enrichment_celltype=CL:0000055!3.52e-15!180;CL:0000222!4.52e-14!119;CL:0002321!3.22e-12!248;CL:0000220!3.89e-12!246;CL:0000183!3.04e-10!59;CL:0000115!6.94e-09!35;CL:0002078!9.68e-09!44;CL:0000680!2.14e-08!57;CL:0000056!2.14e-08!57;CL:0000355!2.14e-08!57;CL:0000187!3.58e-08!54;CL:0000393!3.88e-08!60;CL:0000211!3.88e-08!60;CL:0000192!2.69e-07!42;CL:0000514!2.69e-07!42;CL:0002139!3.64e-07!24;CL:0000213!7.90e-07!57;CL:0000215!7.90e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.41e-08;36!CL:0002139;3.37e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.24e-14,121;CL:0002321,1.12e-12,250;CL:0000115,3.54e-09,36;CL:0002078,5.05e-09,45;CL:0000680,1.14e-08,58;CL:0000056,1.14e-08,58;CL:0000355,1.14e-08,58;CL:0000187,1.90e-08,55;CL:0000393,2.09e-08,61;CL:0000211,2.09e-08,61;CL:0000192,1.42e-07,43;CL:0000514,1.42e-07,43;CL:0002139,3.64e-07,24;CL:0000213,4.46e-07,58;CL:0000215,4.46e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@SHISA5 | |||
}} |
Revision as of 00:28, 13 September 2013
Short description: | p3@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SHISA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000415268, ENST00000417841, ENST00000424965, ENST00000441507, ENST00000443308_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | F8WCE2C9IZ46F8WFD9F8WDS1F8W9N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.24e-14 | 121 |
embryonic cell | 1.12e-12 | 250 |
endothelial cell | 3.54e-09 | 36 |
meso-epithelial cell | 5.05e-09 | 45 |
muscle precursor cell | 1.14e-08 | 58 |
myoblast | 1.14e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-08 | 58 |
muscle cell | 1.90e-08 | 55 |
electrically responsive cell | 2.09e-08 | 61 |
electrically active cell | 2.09e-08 | 61 |
smooth muscle cell | 1.42e-07 | 43 |
smooth muscle myoblast | 1.42e-07 | 43 |
endothelial cell of vascular tree | 3.64e-07 | 24 |
lining cell | 4.46e-07 | 58 |
barrier cell | 4.46e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.