FFCP PHASE1:Hg19::chr6:31554636..31554678,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7940|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14189|TSSclassifier=S|UniProt=Q5HYT5|association_with_transcript=0bp_to_ENST00000433492_5end|description=CAGE_peak_7_at_LST1_5end|id=chr6:31554636..31554678,+|ontology_enrichment_celltype=CL:0000037!8.23e-83!172;CL:0000566!8.23e-83!172;CL:0000988!1.90e-75!182;CL:0002032!2.31e-75!165;CL:0000837!2.31e-75!165;CL:0000738!3.83e-62!140;CL:0002087!2.04e-56!119;CL:0002031!4.89e-55!124;CL:0000763!1.13e-48!112;CL:0000049!1.13e-48!112;CL:0000766!3.21e-32!76;CL:0002009!6.69e-32!65;CL:0002194!4.41e-30!63;CL:0000576!4.41e-30!63;CL:0000040!4.41e-30!63;CL:0000559!4.41e-30!63;CL:0002057!2.75e-29!42;CL:0000839!1.76e-28!70;CL:0000557!2.00e-28!71;CL:0000860!2.89e-26!45;CL:0000838!6.67e-23!52;CL:0000542!3.60e-22!53;CL:0000051!3.60e-22!53;CL:0000134!1.60e-15!358;CL:0002320!1.83e-14!365;CL:0000084!1.24e-11!25;CL:0000827!1.24e-11!25;CL:0000219!2.70e-11!390;CL:0000791!3.40e-11!18;CL:0000789!3.40e-11!18;CL:0002420!3.40e-11!18;CL:0002419!3.40e-11!18;CL:0000790!3.40e-11!18;CL:0000945!1.05e-10!24;CL:0000826!1.05e-10!24;CL:0000236!1.81e-10!14;CL:0002393!1.46e-09!9;CL:0002397!1.46e-09!9;CL:0000625!3.95e-09!11;CL:0000048!6.67e-07!430;CL:0000034!7.29e-07!444|ontology_enrichment_celltype_v019=CL:0000860;3.96e-21;33!CL:0002057;3.96e-21;33!CL:0000576;3.32e-20;48!CL:0000473;1.92e-19;39!CL:0000234;1.92e-19;39!CL:0000763;1.52e-17;100!CL:0000766;6.95e-16;69!CL:0000738;6.12e-14;136!CL:0000988;2.76e-13;177!CL:0002087;4.10e-13;104!CL:0000542;7.83e-13;53!CL:0000236;1.04e-12;13!CL:0000625;1.19e-12;11!CL:0000084;1.24e-11;25!CL:0000791;9.02e-10;18!CL:0000789;9.02e-10;18!CL:0002419;9.02e-10;18!CL:0000094;1.44e-08;8!CL:0000945;1.10e-07;24!CL:0000219;7.53e-07;193|ontology_enrichment_celltype_v019_2=CL:0000037,1.95e-89,168;CL:0000988,2.95e-83,177;CL:0002032,1.35e-79,161;CL:0000837,1.35e-79,161;CL:0000738,8.15e-65,136;CL:0000763,4.63e-59,108;CL:0000049,4.63e-59,108;CL:0002087,7.19e-56,115;CL:0002031,1.33e-52,120;CL:0000766,3.12e-38,72;CL:0002009,1.38e-37,61;CL:0002194,4.88e-35,59;CL:0000576,4.88e-35,59;CL:0000040,4.88e-35,59;CL:0000559,4.88e-35,59;CL:0000473,5.05e-33,48;CL:0000234,5.05e-33,48;CL:0000557,6.32e-33,67;CL:0000839,2.20e-31,66;CL:0000860,3.02e-31,42;CL:0002057,3.02e-31,42;CL:0000134,9.61e-26,354;CL:0002320,1.21e-24,361;CL:0000219,1.81e-21,386;CL:0000838,1.05e-17,52;CL:0000542,3.41e-17,53;CL:0000051,3.41e-17,53;CL:0000034,8.07e-17,441;CL:0000048,3.86e-16,427;CL:0000723,1.67e-15,433;CL:0000625,1.18e-12,11;CL:0000236,1.12e-11,14;CL:0000084,1.45e-11,25;CL:0000827,1.45e-11,25;CL:0000791,9.32e-10,18;CL:0000789,9.32e-10,18;CL:0002420,9.32e-10,18;CL:0002419,9.32e-10,18;CL:0000790,9.32e-10,18;CL:0002393,4.18e-09,9;CL:0002397,4.18e-09,9;CL:0000094,1.41e-08,8;CL:0000945,1.02e-07,24;CL:0000826,1.02e-07,24|ontology_enrichment_development_v019=CL:0002057;3.53e-23;42!CL:0000049;3.56e-17;108!CL:0000051;7.83e-13;53!CL:0000790;9.02e-10;18|ontology_enrichment_disease=DOID:1240!2.18e-19!39;DOID:8692!8.47e-19!31;DOID:2531!3.61e-17!51;DOID:0060083!3.61e-17!51|ontology_enrichment_disease_v019=DOID:8692;2.66e-23;31!DOID:1240;7.31e-18;39!DOID:2531;7.38e-13;51!DOID:0060083;7.38e-13;51|ontology_enrichment_disease_v019_2=DOID:8692,2.00e-24,31;DOID:1240,2.97e-23,39;DOID:2531,8.60e-20,51;DOID:0060083,8.60e-20,51|ontology_enrichment_uberon=UBERON:0002390!4.84e-35!102;UBERON:0003061!4.84e-35!102;UBERON:0002193!1.74e-31!112;UBERON:0002371!2.49e-24!80;UBERON:0001474!3.15e-21!86;UBERON:0002405!1.81e-17!115;UBERON:0004765!6.53e-16!101;UBERON:0001434!6.53e-16!101;UBERON:0002384!5.97e-14!375;UBERON:0007023!8.83e-09!115;UBERON:0000178!1.07e-07!15;UBERON:0000179!1.07e-07!15;UBERON:0000463!1.07e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.78e-11;15!UBERON:0000179;3.78e-11;15!UBERON:0000463;3.78e-11;15!UBERON:0002390;3.52e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-43,98;UBERON:0003061,1.30e-43,98;UBERON:0002193,5.03e-39,108;UBERON:0002405,3.70e-29,93;UBERON:0002371,4.74e-29,76;UBERON:0001474,7.29e-26,82;UBERON:0002384,7.19e-24,371;UBERON:0004765,2.70e-22,90;UBERON:0001434,1.14e-18,100;UBERON:0003081,4.09e-12,203;UBERON:0000178,3.31e-11,15;UBERON:0000179,3.31e-11,15;UBERON:0000463,3.31e-11,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,1.41679406364623,14.9478425202584,4.22212337906934,6.03782880932696,0,0,0,1.23947520928483,0.284338464974843,24.0752360254575,3.32397245119126,0.802177789880567,0.651032612147555,0.223915474239924,0,0.257575567634187,1.74477886535478,1.88937971844405,1.69808842831471,1.62700325833979,1.23350366406548,4.02618282163635,2.3015391385772,3.33008918487831,4.49316236788312,1.03423704220986,2.5819387343353,0,2.07066573496865,3.27487380069415,4.04502272001152,0.918251677112708,2.88836124368484,1.91801137739712,1.64925650093358,2.79249120670285,1.70489900213078,1.45104619314292,1.13477044938228,0.622822248995575,2.00998932205395,1.5644487552606,4.56096573880745,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |||
|TSSclassifier=S | |||
|UniProt=Q5HYT5 | |||
|association_with_transcript=0bp_to_ENST00000433492_5end | |||
|description=CAGE_peak_7_at_LST1_5end | |||
|id=chr6:31554636..31554678,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.23e-83!172;CL:0000566!8.23e-83!172;CL:0000988!1.90e-75!182;CL:0002032!2.31e-75!165;CL:0000837!2.31e-75!165;CL:0000738!3.83e-62!140;CL:0002087!2.04e-56!119;CL:0002031!4.89e-55!124;CL:0000763!1.13e-48!112;CL:0000049!1.13e-48!112;CL:0000766!3.21e-32!76;CL:0002009!6.69e-32!65;CL:0002194!4.41e-30!63;CL:0000576!4.41e-30!63;CL:0000040!4.41e-30!63;CL:0000559!4.41e-30!63;CL:0002057!2.75e-29!42;CL:0000839!1.76e-28!70;CL:0000557!2.00e-28!71;CL:0000860!2.89e-26!45;CL:0000838!6.67e-23!52;CL:0000542!3.60e-22!53;CL:0000051!3.60e-22!53;CL:0000134!1.60e-15!358;CL:0002320!1.83e-14!365;CL:0000084!1.24e-11!25;CL:0000827!1.24e-11!25;CL:0000219!2.70e-11!390;CL:0000791!3.40e-11!18;CL:0000789!3.40e-11!18;CL:0002420!3.40e-11!18;CL:0002419!3.40e-11!18;CL:0000790!3.40e-11!18;CL:0000945!1.05e-10!24;CL:0000826!1.05e-10!24;CL:0000236!1.81e-10!14;CL:0002393!1.46e-09!9;CL:0002397!1.46e-09!9;CL:0000625!3.95e-09!11;CL:0000048!6.67e-07!430;CL:0000034!7.29e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.96e-21;33!CL:0002057;3.96e-21;33!CL:0000576;3.32e-20;48!CL:0000473;1.92e-19;39!CL:0000234;1.92e-19;39!CL:0000763;1.52e-17;100!CL:0000766;6.95e-16;69!CL:0000738;6.12e-14;136!CL:0000988;2.76e-13;177!CL:0002087;4.10e-13;104!CL:0000542;7.83e-13;53!CL:0000236;1.04e-12;13!CL:0000625;1.19e-12;11!CL:0000084;1.24e-11;25!CL:0000791;9.02e-10;18!CL:0000789;9.02e-10;18!CL:0002419;9.02e-10;18!CL:0000094;1.44e-08;8!CL:0000945;1.10e-07;24!CL:0000219;7.53e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.95e-89,168;CL:0000988,2.95e-83,177;CL:0002032,1.35e-79,161;CL:0000837,1.35e-79,161;CL:0000738,8.15e-65,136;CL:0000763,4.63e-59,108;CL:0000049,4.63e-59,108;CL:0002087,7.19e-56,115;CL:0002031,1.33e-52,120;CL:0000766,3.12e-38,72;CL:0002009,1.38e-37,61;CL:0002194,4.88e-35,59;CL:0000576,4.88e-35,59;CL:0000040,4.88e-35,59;CL:0000559,4.88e-35,59;CL:0000473,5.05e-33,48;CL:0000234,5.05e-33,48;CL:0000557,6.32e-33,67;CL:0000839,2.20e-31,66;CL:0000860,3.02e-31,42;CL:0002057,3.02e-31,42;CL:0000134,9.61e-26,354;CL:0002320,1.21e-24,361;CL:0000219,1.81e-21,386;CL:0000838,1.05e-17,52;CL:0000542,3.41e-17,53;CL:0000051,3.41e-17,53;CL:0000034,8.07e-17,441;CL:0000048,3.86e-16,427;CL:0000723,1.67e-15,433;CL:0000625,1.18e-12,11;CL:0000236,1.12e-11,14;CL:0000084,1.45e-11,25;CL:0000827,1.45e-11,25;CL:0000791,9.32e-10,18;CL:0000789,9.32e-10,18;CL:0002420,9.32e-10,18;CL:0002419,9.32e-10,18;CL:0000790,9.32e-10,18;CL:0002393,4.18e-09,9;CL:0002397,4.18e-09,9;CL:0000094,1.41e-08,8;CL:0000945,1.02e-07,24;CL:0000826,1.02e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;3.53e-23;42!CL:0000049;3.56e-17;108!CL:0000051;7.83e-13;53!CL:0000790;9.02e-10;18 | |||
|ontology_enrichment_disease=DOID:1240!2.18e-19!39;DOID:8692!8.47e-19!31;DOID:2531!3.61e-17!51;DOID:0060083!3.61e-17!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.66e-23;31!DOID:1240;7.31e-18;39!DOID:2531;7.38e-13;51!DOID:0060083;7.38e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.00e-24,31;DOID:1240,2.97e-23,39;DOID:2531,8.60e-20,51;DOID:0060083,8.60e-20,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.84e-35!102;UBERON:0003061!4.84e-35!102;UBERON:0002193!1.74e-31!112;UBERON:0002371!2.49e-24!80;UBERON:0001474!3.15e-21!86;UBERON:0002405!1.81e-17!115;UBERON:0004765!6.53e-16!101;UBERON:0001434!6.53e-16!101;UBERON:0002384!5.97e-14!375;UBERON:0007023!8.83e-09!115;UBERON:0000178!1.07e-07!15;UBERON:0000179!1.07e-07!15;UBERON:0000463!1.07e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.78e-11;15!UBERON:0000179;3.78e-11;15!UBERON:0000463;3.78e-11;15!UBERON:0002390;3.52e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-43,98;UBERON:0003061,1.30e-43,98;UBERON:0002193,5.03e-39,108;UBERON:0002405,3.70e-29,93;UBERON:0002371,4.74e-29,76;UBERON:0001474,7.29e-26,82;UBERON:0002384,7.19e-24,371;UBERON:0004765,2.70e-22,90;UBERON:0001434,1.14e-18,100;UBERON:0003081,4.09e-12,203;UBERON:0000178,3.31e-11,15;UBERON:0000179,3.31e-11,15;UBERON:0000463,3.31e-11,15 | |||
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| |||
|short_description=p7@LST1 | |||
}} |
Revision as of 20:13, 13 September 2013
Short description: | p7@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433492_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5HYT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.30e-43 | 98 |
blood island | 1.30e-43 | 98 |
hemolymphoid system | 5.03e-39 | 108 |
immune system | 3.70e-29 | 93 |
bone marrow | 4.74e-29 | 76 |
bone element | 7.29e-26 | 82 |
connective tissue | 7.19e-24 | 371 |
skeletal element | 2.70e-22 | 90 |
skeletal system | 1.14e-18 | 100 |
lateral plate mesoderm | 4.09e-12 | 203 |
blood | 3.31e-11 | 15 |
haemolymphatic fluid | 3.31e-11 | 15 |
organism substance | 3.31e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.00e-24 | 31 |
leukemia | 2.97e-23 | 39 |
hematologic cancer | 8.60e-20 | 51 |
immune system cancer | 8.60e-20 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.