FFCP PHASE1:Mm9::chr2:63022611..63022623,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=170738|HGNC=|MCL_coexpression_id=2|UniProt=Q8CC38,Q9ER47,Q8C782|association_with_transcript=-267bp_to_ENSMUST00000112454,NM_133207,uc008jvq.1,uc008jvr.1,uc008jvs.1,uc008jvt.1_5end|description=CAGE_peak_3_at_Kcnh7_5end|id=chr2:63022611..63022623,-|ontology_enrichment_celltype=CL:0000117!5.49e-20!23;CL:0000337!5.49e-20!23;CL:0000540!3.13e-14!33;CL:0000047!3.13e-14!33;CL:0000031!3.13e-14!33;CL:0000404!3.13e-14!33;CL:0000393!7.57e-11!39;CL:0000211!7.57e-11!39;CL:0002319!3.76e-09!43;CL:0000221!8.85e-09!44;CL:0000133!8.85e-09!44;CL:0000055!6.77e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-20,23;CL:0000337,1.04e-20,23;CL:0000540,1.41e-13,33;CL:0000047,1.41e-13,33;CL:0000031,1.41e-13,33;CL:0000404,1.41e-13,33;CL:0000393,4.67e-11,39;CL:0000211,4.67e-11,39;CL:0002319,9.03e-10,43;CL:0000221,1.74e-09,44;CL:0000133,1.74e-09,44;CL:0002613,3.75e-09,3;CL:0000120,1.44e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.66e-29!34;UBERON:0000955!9.49e-28!50;UBERON:0006238!9.49e-28!50;UBERON:0001017!1.49e-27!73;UBERON:0005743!1.49e-27!73;UBERON:0001049!1.94e-27!52;UBERON:0005068!1.94e-27!52;UBERON:0006241!1.94e-27!52;UBERON:0007135!1.94e-27!52;UBERON:0002616!1.27e-26!49;UBERON:0000073!2.27e-26!75;UBERON:0001016!2.27e-26!75;UBERON:0002791!2.38e-26!29;UBERON:0003528!2.38e-26!29;UBERON:0001893!2.38e-26!29;UBERON:0003080!6.46e-26!40;UBERON:0000033!2.83e-25!63;UBERON:0002780!6.20e-25!39;UBERON:0001890!6.20e-25!39;UBERON:0006240!6.20e-25!39;UBERON:0003056!4.90e-24!49;UBERON:0002346!1.71e-21!71;UBERON:0003075!1.71e-21!71;UBERON:0007284!1.71e-21!71;UBERON:0000956!1.76e-18!21;UBERON:0001869!1.76e-18!21;UBERON:0000203!1.76e-18!21;UBERON:0004121!1.90e-18!102;UBERON:0000924!1.90e-18!102;UBERON:0006601!1.90e-18!102;UBERON:0007811!2.15e-15!86;UBERON:0002619!4.27e-15!17;UBERON:0002021!2.14e-13!10;UBERON:0000411!2.14e-13!10;UBERON:0001950!2.14e-13!10;UBERON:0000153!6.95e-13!94;UBERON:0002420!6.29e-09!8;UBERON:0007245!6.29e-09!8;UBERON:0010009!6.29e-09!8;UBERON:0010011!6.29e-09!8;UBERON:0000454!6.29e-09!8;UBERON:0000025!1.09e-08!114;UBERON:0004111!6.39e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.11e-35,34;UBERON:0003528,3.76e-34,29;UBERON:0002791,3.76e-34,29;UBERON:0001893,3.76e-34,29;UBERON:0002021,7.01e-31,10;UBERON:0000411,7.01e-31,10;UBERON:0001950,7.01e-31,10;UBERON:0000073,7.90e-30,54;UBERON:0003080,4.11e-29,40;UBERON:0001017,5.30e-29,73;UBERON:0001016,4.37e-28,75;UBERON:0002780,3.57e-27,39;UBERON:0001890,3.57e-27,39;UBERON:0006240,3.57e-27,39;UBERON:0000955,9.23e-27,47;UBERON:0006238,9.23e-27,47;UBERON:0000956,1.61e-26,21;UBERON:0001869,1.61e-26,21;UBERON:0000203,1.61e-26,21;UBERON:0001049,4.89e-26,52;UBERON:0005068,4.89e-26,52;UBERON:0006241,4.89e-26,52;UBERON:0007135,4.89e-26,52;UBERON:0002619,9.70e-25,17;UBERON:0002616,9.93e-25,46;UBERON:0003056,6.12e-23,49;UBERON:0004121,4.85e-21,95;UBERON:0000924,4.85e-21,95;UBERON:0006601,4.85e-21,95;UBERON:0002346,2.98e-20,64;UBERON:0003075,2.98e-20,64;UBERON:0007284,2.98e-20,64;UBERON:0010371,3.69e-17,73;UBERON:0010314,1.30e-12,92;UBERON:0000025,3.05e-09,114;UBERON:0002420,1.24e-08,8;UBERON:0007245,1.24e-08,8;UBERON:0010009,1.24e-08,8;UBERON:0010011,1.24e-08,8;UBERON:0000454,1.24e-08,8;UBERON:0004111,2.56e-08,122;UBERON:0011216,1.91e-07,194|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.622137673850866,1.08004750665353,0.210324961351382,0,0.220868540951614,1.22490799214954,0.670918297127655,0.919218786610021,1.10115880999389,1.27687338085188,0.46081959976873,1.31886287730194,1.09785172322892,1.56274011167028,0.837548997004143,1.12552522006336,1.22238598221448,0.883885756421003,1.13897344639282,1.3047961207771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0.915001205637253,0.502617408451458,6.77914848749878,4.09144731728529,0.62336413367868,1.46017136760982,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0,0,4.81981974632711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0.535106452806212,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,10.5874804396651,14.8952833494243,7.21783365843488,8.90607275701835,15.8632718451837,10.1253375034771,10.8077088773813,9.5159905886683,11.9084871702919,0.207574695168353,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.37456602987953,0.512201219238954,0.229741875822453,0,0.579421629724277,0.964546102318525,0,0.294397840268795,0,0,0.476872379894642,0.726732083161643,0.0941093804153306,0.338458431566706,0.73171189149109,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0,0,0,0,0|short_description=p3@Kcnh7}} | ||
|EntrezGene=170738 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q8CC38,Q9ER47,Q8C782 | |||
|association_with_transcript=-267bp_to_ENSMUST00000112454,NM_133207,uc008jvq.1,uc008jvr.1,uc008jvs.1,uc008jvt.1_5end | |||
|description=CAGE_peak_3_at_Kcnh7_5end | |||
|id=chr2:63022611..63022623,- | |||
|ontology_enrichment_celltype=CL:0000117!5.49e-20!23;CL:0000337!5.49e-20!23;CL:0000540!3.13e-14!33;CL:0000047!3.13e-14!33;CL:0000031!3.13e-14!33;CL:0000404!3.13e-14!33;CL:0000393!7.57e-11!39;CL:0000211!7.57e-11!39;CL:0002319!3.76e-09!43;CL:0000221!8.85e-09!44;CL:0000133!8.85e-09!44;CL:0000055!6.77e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-20,23;CL:0000337,1.04e-20,23;CL:0000540,1.41e-13,33;CL:0000047,1.41e-13,33;CL:0000031,1.41e-13,33;CL:0000404,1.41e-13,33;CL:0000393,4.67e-11,39;CL:0000211,4.67e-11,39;CL:0002319,9.03e-10,43;CL:0000221,1.74e-09,44;CL:0000133,1.74e-09,44;CL:0002613,3.75e-09,3;CL:0000120,1.44e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.66e-29!34;UBERON:0000955!9.49e-28!50;UBERON:0006238!9.49e-28!50;UBERON:0001017!1.49e-27!73;UBERON:0005743!1.49e-27!73;UBERON:0001049!1.94e-27!52;UBERON:0005068!1.94e-27!52;UBERON:0006241!1.94e-27!52;UBERON:0007135!1.94e-27!52;UBERON:0002616!1.27e-26!49;UBERON:0000073!2.27e-26!75;UBERON:0001016!2.27e-26!75;UBERON:0002791!2.38e-26!29;UBERON:0003528!2.38e-26!29;UBERON:0001893!2.38e-26!29;UBERON:0003080!6.46e-26!40;UBERON:0000033!2.83e-25!63;UBERON:0002780!6.20e-25!39;UBERON:0001890!6.20e-25!39;UBERON:0006240!6.20e-25!39;UBERON:0003056!4.90e-24!49;UBERON:0002346!1.71e-21!71;UBERON:0003075!1.71e-21!71;UBERON:0007284!1.71e-21!71;UBERON:0000956!1.76e-18!21;UBERON:0001869!1.76e-18!21;UBERON:0000203!1.76e-18!21;UBERON:0004121!1.90e-18!102;UBERON:0000924!1.90e-18!102;UBERON:0006601!1.90e-18!102;UBERON:0007811!2.15e-15!86;UBERON:0002619!4.27e-15!17;UBERON:0002021!2.14e-13!10;UBERON:0000411!2.14e-13!10;UBERON:0001950!2.14e-13!10;UBERON:0000153!6.95e-13!94;UBERON:0002420!6.29e-09!8;UBERON:0007245!6.29e-09!8;UBERON:0010009!6.29e-09!8;UBERON:0010011!6.29e-09!8;UBERON:0000454!6.29e-09!8;UBERON:0000025!1.09e-08!114;UBERON:0004111!6.39e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.11e-35,34;UBERON:0003528,3.76e-34,29;UBERON:0002791,3.76e-34,29;UBERON:0001893,3.76e-34,29;UBERON:0002021,7.01e-31,10;UBERON:0000411,7.01e-31,10;UBERON:0001950,7.01e-31,10;UBERON:0000073,7.90e-30,54;UBERON:0003080,4.11e-29,40;UBERON:0001017,5.30e-29,73;UBERON:0001016,4.37e-28,75;UBERON:0002780,3.57e-27,39;UBERON:0001890,3.57e-27,39;UBERON:0006240,3.57e-27,39;UBERON:0000955,9.23e-27,47;UBERON:0006238,9.23e-27,47;UBERON:0000956,1.61e-26,21;UBERON:0001869,1.61e-26,21;UBERON:0000203,1.61e-26,21;UBERON:0001049,4.89e-26,52;UBERON:0005068,4.89e-26,52;UBERON:0006241,4.89e-26,52;UBERON:0007135,4.89e-26,52;UBERON:0002619,9.70e-25,17;UBERON:0002616,9.93e-25,46;UBERON:0003056,6.12e-23,49;UBERON:0004121,4.85e-21,95;UBERON:0000924,4.85e-21,95;UBERON:0006601,4.85e-21,95;UBERON:0002346,2.98e-20,64;UBERON:0003075,2.98e-20,64;UBERON:0007284,2.98e-20,64;UBERON:0010371,3.69e-17,73;UBERON:0010314,1.30e-12,92;UBERON:0000025,3.05e-09,114;UBERON:0002420,1.24e-08,8;UBERON:0007245,1.24e-08,8;UBERON:0010009,1.24e-08,8;UBERON:0010011,1.24e-08,8;UBERON:0000454,1.24e-08,8;UBERON:0004111,2.56e-08,122;UBERON:0011216,1.91e-07,194 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.622137673850866,1.08004750665353,0.210324961351382,0,0.220868540951614,1.22490799214954,0.670918297127655,0.919218786610021,1.10115880999389,1.27687338085188,0.46081959976873,1.31886287730194,1.09785172322892,1.56274011167028,0.837548997004143,1.12552522006336,1.22238598221448,0.883885756421003,1.13897344639282,1.3047961207771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0.915001205637253,0.502617408451458,6.77914848749878,4.09144731728529,0.62336413367868,1.46017136760982,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0,0,4.81981974632711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0.535106452806212,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,10.5874804396651,14.8952833494243,7.21783365843488,8.90607275701835,15.8632718451837,10.1253375034771,10.8077088773813,9.5159905886683,11.9084871702919,0.207574695168353,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.37456602987953,0.512201219238954,0.229741875822453,0,0.579421629724277,0.964546102318525,0,0.294397840268795,0,0,0.476872379894642,0.726732083161643,0.0941093804153306,0.338458431566706,0.73171189149109,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p3@Kcnh7 | |||
}} |
Revision as of 00:16, 14 September 2013
Short description: | p3@Kcnh7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnh7_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -267bp_to_ENSMUST00000112454, NM_133207, uc008jvq.1, uc008jvr.1, uc008jvs.1, uc008jvt.1_5end |
EntrezGene: | Kcnh7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.04e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-20 | 23 |
neuron | 1.41e-13 | 33 |
neuronal stem cell | 1.41e-13 | 33 |
neuroblast | 1.41e-13 | 33 |
electrically signaling cell | 1.41e-13 | 33 |
electrically responsive cell | 4.67e-11 | 39 |
electrically active cell | 4.67e-11 | 39 |
neural cell | 9.03e-10 | 43 |
ectodermal cell | 1.74e-09 | 44 |
neurectodermal cell | 1.74e-09 | 44 |
striatum neuron | 3.75e-09 | 3 |
granule cell | 1.44e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.