FFCP PHASE1:Mm9::chr4:63521926..63521955,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=291|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:63521926..63521955,-|id=chr4:63521926..63521955,-|ontology_enrichment_celltype=CL:0000838!2.27e-23!12;CL:0000084!3.71e-22!11;CL:0000827!3.71e-22!11;CL:0000542!2.56e-21!13;CL:0000051!2.56e-21!13;CL:0000791!1.64e-18!9;CL:0000789!1.64e-18!9;CL:0002420!1.64e-18!9;CL:0002419!1.64e-18!9;CL:0000790!1.64e-18!9;CL:0000624!1.27e-16!8;CL:0000738!1.56e-15!17;CL:0002087!1.56e-15!17;CL:0002031!2.05e-15!25;CL:0000893!6.11e-13!6;CL:0002489!6.11e-13!6;CL:0000898!6.11e-13!6;CL:0000809!6.11e-13!6;CL:0000810!6.11e-13!6;CL:0000895!6.11e-13!6;CL:0000808!6.11e-13!6;CL:0000894!6.11e-13!6;CL:0000806!6.11e-13!6;CL:0000807!6.11e-13!6;CL:0000805!6.11e-13!6;CL:0002425!6.11e-13!6;CL:0002436!6.11e-13!6;CL:0002427!6.11e-13!6;CL:0002428!6.11e-13!6;CL:0002429!6.11e-13!6;CL:0002433!6.11e-13!6;CL:0002431!6.11e-13!6;CL:0002432!6.11e-13!6;CL:0000988!1.42e-12!32;CL:0002032!1.42e-12!32;CL:0000037!1.42e-12!32;CL:0000566!1.42e-12!32;CL:0000837!1.42e-12!32;CL:0002320!1.75e-07!46;CL:0000134!1.75e-07!46|ontology_enrichment_celltype_v019_2=CL:0000084,1.39e-60,11;CL:0000827,1.39e-60,11;CL:0000838,1.93e-55,12;CL:0000542,4.37e-51,13;CL:0000051,4.37e-51,13;CL:0000791,4.50e-50,9;CL:0000789,4.50e-50,9;CL:0002420,4.50e-50,9;CL:0002419,4.50e-50,9;CL:0000790,4.50e-50,9;CL:0000624,1.25e-44,8;CL:0000738,8.80e-39,17;CL:0002087,8.80e-39,17;CL:0000893,4.81e-34,6;CL:0002489,4.81e-34,6;CL:0000898,4.81e-34,6;CL:0000809,4.81e-34,6;CL:0000810,4.81e-34,6;CL:0000895,4.81e-34,6;CL:0000808,4.81e-34,6;CL:0000894,4.81e-34,6;CL:0000806,4.81e-34,6;CL:0000807,4.81e-34,6;CL:0000805,4.81e-34,6;CL:0002425,4.81e-34,6;CL:0002436,4.81e-34,6;CL:0002427,4.81e-34,6;CL:0002428,4.81e-34,6;CL:0002429,4.81e-34,6;CL:0002433,4.81e-34,6;CL:0002431,4.81e-34,6;CL:0002432,4.81e-34,6;CL:0002031,8.12e-31,25;CL:0000988,9.26e-24,32;CL:0002032,9.26e-24,32;CL:0000037,9.26e-24,32;CL:0000837,9.26e-24,32;CL:0002320,4.56e-16,46;CL:0000134,4.56e-16,46;CL:0000219,1.87e-13,54;CL:0000723,2.63e-07,91;CL:0000048,2.63e-07,91;CL:0000625,5.34e-07,1;CL:0000815,6.09e-07,1;CL:0000792,6.09e-07,1;CL:0000034,9.52e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.55e-25!29;UBERON:0002370!1.24e-23!23;UBERON:0000974!1.24e-23!23;UBERON:0004807!1.24e-23!23;UBERON:0005058!1.24e-23!23;UBERON:0003351!1.24e-23!23;UBERON:0009113!1.24e-23!23;UBERON:0003295!1.24e-23!23;UBERON:0009722!1.24e-23!23;UBERON:0005562!1.24e-23!23;UBERON:0007690!1.24e-23!23;UBERON:0006562!1.94e-22!24;UBERON:0003408!1.94e-22!24;UBERON:0001557!1.94e-22!24;UBERON:0001042!1.94e-22!24;UBERON:0008814!1.94e-22!24;UBERON:0009145!1.94e-22!24;UBERON:0002193!2.48e-21!48;UBERON:0000072!2.19e-19!27;UBERON:0002390!2.83e-19!45;UBERON:0003061!2.83e-19!45;UBERON:0000065!7.14e-17!41;UBERON:0001004!2.49e-16!42;UBERON:0000063!7.87e-14!35;UBERON:0002405!1.37e-13!70;UBERON:0005057!5.55e-13!51;UBERON:0001041!5.33e-09!92;UBERON:0000077!5.40e-09!97;UBERON:0005911!1.20e-08!69;UBERON:0003081!1.58e-08!88;UBERON:0003929!4.45e-08!55;UBERON:0002368!7.33e-08!60;UBERON:0002384!1.75e-07!46;UBERON:0001007!5.35e-07!128;UBERON:0001555!5.35e-07!128;UBERON:0007026!5.35e-07!128;UBERON:0002530!6.95e-07!65;UBERON:0004119!8.93e-07!130;UBERON:0000925!8.93e-07!130;UBERON:0006595!8.93e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.56e-16,46;UBERON:0004177,1.53e-11,29;UBERON:0005057,1.53e-11,29;UBERON:0002370,1.72e-11,23;UBERON:0000974,1.72e-11,23;UBERON:0004807,1.72e-11,23;UBERON:0005058,1.72e-11,23;UBERON:0003351,1.72e-11,23;UBERON:0009113,1.72e-11,23;UBERON:0003295,1.72e-11,23;UBERON:0009722,1.72e-11,23;UBERON:0005562,1.72e-11,23;UBERON:0007690,1.72e-11,23;UBERON:0006562,5.52e-11,24;UBERON:0003408,5.52e-11,24;UBERON:0001557,5.52e-11,24;UBERON:0001042,5.52e-11,24;UBERON:0008814,5.52e-11,24;UBERON:0009145,5.52e-11,24;UBERON:0002193,2.16e-10,48;UBERON:0002405,2.16e-10,48;UBERON:0000072,1.09e-09,27;UBERON:0000077,2.07e-09,35;UBERON:0002390,5.79e-09,45;UBERON:0003061,5.79e-09,45;UBERON:0007811,4.27e-07,36;UBERON:0000029,4.68e-07,1;UBERON:0001097,4.68e-07,1;UBERON:0003968,4.68e-07,1;UBERON:0001467,4.68e-07,1|phase1_expression=0,0,0,0,0,0,0,5.81054955487093,3.23814060948833,2.34064526321993,10.1018601253048,11.4871908953284,10.1008430659411,8.74204024189974,0,0,0,0.946386496074713,1.37114433605739,0.84877930359606,0,1.58865521921416,5.74639536105658,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,4.35217285206807,7.05796978199174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.25026074212081,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,1.19609616558497,0,0,0,0.546776910884101,0.686334519619568,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.924398614483445,0.51968329191118,0.537080087002444,0.79472541912506,0.240390899039938,0.295379054349154,0.504832249740738,0.762068066549998,0.403304740547362,0.779663045918019,0.384847366561318,1.40252282617883,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:63521926..63521955,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=291 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:63521926..63521955,- | |||
|id=chr4:63521926..63521955,- | |||
|ontology_enrichment_celltype=CL:0000838!2.27e-23!12;CL:0000084!3.71e-22!11;CL:0000827!3.71e-22!11;CL:0000542!2.56e-21!13;CL:0000051!2.56e-21!13;CL:0000791!1.64e-18!9;CL:0000789!1.64e-18!9;CL:0002420!1.64e-18!9;CL:0002419!1.64e-18!9;CL:0000790!1.64e-18!9;CL:0000624!1.27e-16!8;CL:0000738!1.56e-15!17;CL:0002087!1.56e-15!17;CL:0002031!2.05e-15!25;CL:0000893!6.11e-13!6;CL:0002489!6.11e-13!6;CL:0000898!6.11e-13!6;CL:0000809!6.11e-13!6;CL:0000810!6.11e-13!6;CL:0000895!6.11e-13!6;CL:0000808!6.11e-13!6;CL:0000894!6.11e-13!6;CL:0000806!6.11e-13!6;CL:0000807!6.11e-13!6;CL:0000805!6.11e-13!6;CL:0002425!6.11e-13!6;CL:0002436!6.11e-13!6;CL:0002427!6.11e-13!6;CL:0002428!6.11e-13!6;CL:0002429!6.11e-13!6;CL:0002433!6.11e-13!6;CL:0002431!6.11e-13!6;CL:0002432!6.11e-13!6;CL:0000988!1.42e-12!32;CL:0002032!1.42e-12!32;CL:0000037!1.42e-12!32;CL:0000566!1.42e-12!32;CL:0000837!1.42e-12!32;CL:0002320!1.75e-07!46;CL:0000134!1.75e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.39e-60,11;CL:0000827,1.39e-60,11;CL:0000838,1.93e-55,12;CL:0000542,4.37e-51,13;CL:0000051,4.37e-51,13;CL:0000791,4.50e-50,9;CL:0000789,4.50e-50,9;CL:0002420,4.50e-50,9;CL:0002419,4.50e-50,9;CL:0000790,4.50e-50,9;CL:0000624,1.25e-44,8;CL:0000738,8.80e-39,17;CL:0002087,8.80e-39,17;CL:0000893,4.81e-34,6;CL:0002489,4.81e-34,6;CL:0000898,4.81e-34,6;CL:0000809,4.81e-34,6;CL:0000810,4.81e-34,6;CL:0000895,4.81e-34,6;CL:0000808,4.81e-34,6;CL:0000894,4.81e-34,6;CL:0000806,4.81e-34,6;CL:0000807,4.81e-34,6;CL:0000805,4.81e-34,6;CL:0002425,4.81e-34,6;CL:0002436,4.81e-34,6;CL:0002427,4.81e-34,6;CL:0002428,4.81e-34,6;CL:0002429,4.81e-34,6;CL:0002433,4.81e-34,6;CL:0002431,4.81e-34,6;CL:0002432,4.81e-34,6;CL:0002031,8.12e-31,25;CL:0000988,9.26e-24,32;CL:0002032,9.26e-24,32;CL:0000037,9.26e-24,32;CL:0000837,9.26e-24,32;CL:0002320,4.56e-16,46;CL:0000134,4.56e-16,46;CL:0000219,1.87e-13,54;CL:0000723,2.63e-07,91;CL:0000048,2.63e-07,91;CL:0000625,5.34e-07,1;CL:0000815,6.09e-07,1;CL:0000792,6.09e-07,1;CL:0000034,9.52e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.55e-25!29;UBERON:0002370!1.24e-23!23;UBERON:0000974!1.24e-23!23;UBERON:0004807!1.24e-23!23;UBERON:0005058!1.24e-23!23;UBERON:0003351!1.24e-23!23;UBERON:0009113!1.24e-23!23;UBERON:0003295!1.24e-23!23;UBERON:0009722!1.24e-23!23;UBERON:0005562!1.24e-23!23;UBERON:0007690!1.24e-23!23;UBERON:0006562!1.94e-22!24;UBERON:0003408!1.94e-22!24;UBERON:0001557!1.94e-22!24;UBERON:0001042!1.94e-22!24;UBERON:0008814!1.94e-22!24;UBERON:0009145!1.94e-22!24;UBERON:0002193!2.48e-21!48;UBERON:0000072!2.19e-19!27;UBERON:0002390!2.83e-19!45;UBERON:0003061!2.83e-19!45;UBERON:0000065!7.14e-17!41;UBERON:0001004!2.49e-16!42;UBERON:0000063!7.87e-14!35;UBERON:0002405!1.37e-13!70;UBERON:0005057!5.55e-13!51;UBERON:0001041!5.33e-09!92;UBERON:0000077!5.40e-09!97;UBERON:0005911!1.20e-08!69;UBERON:0003081!1.58e-08!88;UBERON:0003929!4.45e-08!55;UBERON:0002368!7.33e-08!60;UBERON:0002384!1.75e-07!46;UBERON:0001007!5.35e-07!128;UBERON:0001555!5.35e-07!128;UBERON:0007026!5.35e-07!128;UBERON:0002530!6.95e-07!65;UBERON:0004119!8.93e-07!130;UBERON:0000925!8.93e-07!130;UBERON:0006595!8.93e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.56e-16,46;UBERON:0004177,1.53e-11,29;UBERON:0005057,1.53e-11,29;UBERON:0002370,1.72e-11,23;UBERON:0000974,1.72e-11,23;UBERON:0004807,1.72e-11,23;UBERON:0005058,1.72e-11,23;UBERON:0003351,1.72e-11,23;UBERON:0009113,1.72e-11,23;UBERON:0003295,1.72e-11,23;UBERON:0009722,1.72e-11,23;UBERON:0005562,1.72e-11,23;UBERON:0007690,1.72e-11,23;UBERON:0006562,5.52e-11,24;UBERON:0003408,5.52e-11,24;UBERON:0001557,5.52e-11,24;UBERON:0001042,5.52e-11,24;UBERON:0008814,5.52e-11,24;UBERON:0009145,5.52e-11,24;UBERON:0002193,2.16e-10,48;UBERON:0002405,2.16e-10,48;UBERON:0000072,1.09e-09,27;UBERON:0000077,2.07e-09,35;UBERON:0002390,5.79e-09,45;UBERON:0003061,5.79e-09,45;UBERON:0007811,4.27e-07,36;UBERON:0000029,4.68e-07,1;UBERON:0001097,4.68e-07,1;UBERON:0003968,4.68e-07,1;UBERON:0001467,4.68e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,5.81054955487093,3.23814060948833,2.34064526321993,10.1018601253048,11.4871908953284,10.1008430659411,8.74204024189974,0,0,0,0.946386496074713,1.37114433605739,0.84877930359606,0,1.58865521921416,5.74639536105658,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,4.35217285206807,7.05796978199174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.25026074212081,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,1.19609616558497,0,0,0,0.546776910884101,0.686334519619568,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.924398614483445,0.51968329191118,0.537080087002444,0.79472541912506,0.240390899039938,0.295379054349154,0.504832249740738,0.762068066549998,0.403304740547362,0.779663045918019,0.384847366561318,1.40252282617883,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:63521926..63521955,- | |||
}} |
Revision as of 05:23, 14 September 2013
Short description: | p@chr4:63521926..63521955, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:63521926..63521955, - |
Coexpression cluster: | MCL_coexpression_mm9:291 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.56e-16 | 46 |
hemopoietic organ | 1.53e-11 | 29 |
immune organ | 1.53e-11 | 29 |
thymus | 1.72e-11 | 23 |
neck | 1.72e-11 | 23 |
respiratory system epithelium | 1.72e-11 | 23 |
hemolymphoid system gland | 1.72e-11 | 23 |
pharyngeal epithelium | 1.72e-11 | 23 |
thymic region | 1.72e-11 | 23 |
pharyngeal gland | 1.72e-11 | 23 |
entire pharyngeal arch endoderm | 1.72e-11 | 23 |
thymus primordium | 1.72e-11 | 23 |
early pharyngeal endoderm | 1.72e-11 | 23 |
pharynx | 5.52e-11 | 24 |
gland of gut | 5.52e-11 | 24 |
upper respiratory tract | 5.52e-11 | 24 |
chordate pharynx | 5.52e-11 | 24 |
pharyngeal arch system | 5.52e-11 | 24 |
pharyngeal region of foregut | 5.52e-11 | 24 |
hemolymphoid system | 2.16e-10 | 48 |
immune system | 2.16e-10 | 48 |
segment of respiratory tract | 1.09e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 2.07e-09 | 35 |
hematopoietic system | 5.79e-09 | 45 |
blood island | 5.79e-09 | 45 |
craniocervical region | 4.27e-07 | 36 |
lymph node | 4.68e-07 | 1 |
axillary lymph node | 4.68e-07 | 1 |
peripheral lymph node | 4.68e-07 | 1 |
shoulder | 4.68e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.