FFCP PHASE1:Mm9::chr9:4376533..4376600,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78100|HGNC=|MCL_coexpression_id=937|UniProt=Q91YU3|association_with_transcript=0bp_to_uc009obm.1_5end|description=CAGE_peak_1_at_8430410K20Rik_5end|id=chr9:4376533..4376600,+|ontology_enrichment_celltype=CL:0000393!1.10e-07!39;CL:0000211!1.10e-07!39|ontology_enrichment_celltype_v019_2=CL:0000393,1.10e-07,39;CL:0000211,1.10e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.44e-16!63;UBERON:0002346!2.88e-15!71;UBERON:0003075!2.88e-15!71;UBERON:0007284!2.88e-15!71;UBERON:0000955!1.83e-14!50;UBERON:0006238!1.83e-14!50;UBERON:0004121!5.76e-14!102;UBERON:0000924!5.76e-14!102;UBERON:0006601!5.76e-14!102;UBERON:0003056!6.06e-14!49;UBERON:0000073!7.64e-14!75;UBERON:0001016!7.64e-14!75;UBERON:0002616!7.99e-14!49;UBERON:0001017!2.71e-13!73;UBERON:0005743!2.71e-13!73;UBERON:0004111!6.03e-12!122;UBERON:0000025!6.36e-12!114;UBERON:0003080!9.46e-12!40;UBERON:0001049!2.34e-11!52;UBERON:0005068!2.34e-11!52;UBERON:0006241!2.34e-11!52;UBERON:0007135!2.34e-11!52;UBERON:0002780!3.81e-11!39;UBERON:0001890!3.81e-11!39;UBERON:0006240!3.81e-11!39;UBERON:0002791!1.53e-09!29;UBERON:0003528!1.53e-09!29;UBERON:0001893!1.53e-09!29;UBERON:0000468!2.70e-08!333;UBERON:0002020!3.20e-08!34;UBERON:0004535!7.41e-08!23;UBERON:0001009!7.41e-08!23;UBERON:0000922!3.04e-07!328;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10;UBERON:0003103!4.72e-07!43;UBERON:0007100!5.13e-07!18;UBERON:0000948!5.13e-07!18;UBERON:0005498!5.13e-07!18;UBERON:0004140!5.13e-07!18;UBERON:0009881!5.13e-07!18;UBERON:0004141!5.13e-07!18;UBERON:0003084!5.13e-07!18;UBERON:0007005!5.13e-07!18;UBERON:0004139!5.13e-07!18;UBERON:0004291!5.13e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.04e-22,92;UBERON:0002346,5.33e-15,64;UBERON:0003075,5.33e-15,64;UBERON:0007284,5.33e-15,64;UBERON:0003056,6.06e-14,49;UBERON:0001016,7.64e-14,75;UBERON:0004121,2.10e-13,95;UBERON:0000924,2.10e-13,95;UBERON:0006601,2.10e-13,95;UBERON:0001017,2.71e-13,73;UBERON:0000955,1.29e-12,47;UBERON:0006238,1.29e-12,47;UBERON:0000073,1.34e-12,54;UBERON:0002616,5.33e-12,46;UBERON:0004111,6.03e-12,122;UBERON:0000025,6.36e-12,114;UBERON:0003080,9.46e-12,40;UBERON:0010371,1.96e-11,73;UBERON:0001049,2.34e-11,52;UBERON:0005068,2.34e-11,52;UBERON:0006241,2.34e-11,52;UBERON:0007135,2.34e-11,52;UBERON:0002780,3.81e-11,39;UBERON:0001890,3.81e-11,39;UBERON:0006240,3.81e-11,39;UBERON:0003528,1.53e-09,29;UBERON:0002791,1.53e-09,29;UBERON:0001893,1.53e-09,29;UBERON:0000922,1.83e-08,320;UBERON:0002020,3.20e-08,34;UBERON:0004535,7.41e-08,23;UBERON:0001009,7.41e-08,23;UBERON:0002021,4.60e-07,10;UBERON:0000411,4.60e-07,10;UBERON:0001950,4.60e-07,10;UBERON:0003103,4.72e-07,43;UBERON:0007100,5.13e-07,18;UBERON:0000948,5.13e-07,18;UBERON:0005498,5.13e-07,18;UBERON:0004140,5.13e-07,18;UBERON:0009881,5.13e-07,18;UBERON:0004141,5.13e-07,18;UBERON:0003084,5.13e-07,18;UBERON:0007005,5.13e-07,18;UBERON:0004139,5.13e-07,18;UBERON:0004291,5.13e-07,18|phase1_expression=16.6554800988986,9.77131141390211,5.91499011206397,9.98131897312539,6.51164448930251,9.40123922706583,13.315920513945,7.23090611272827,1.12630977721333,1.63845168425395,4.10923123741212,7.0199499915896,6.67682846731702,5.76974655965383,5.66286595086627,5.4668322195253,3.49780939064073,6.94016763788123,4.11343300817216,4.2438965179803,16.0731818385522,7.04965753526286,11.2315909329742,19.8390604263824,15.8292403936347,9.76194338995534,6.46142994238612,15.0829862880122,20.1424824623756,15.8778981748756,13.5255611499736,5.08024538767705,6.76571266343027,0,5.77703239502549,12.8000676926039,8.5751129630195,7.53356935326434,7.0320181007142,8.37637990358077,4.70585190424811,4.78131839470912,5.82612423637384,24.423982687262,21.4919094185371,23.8610777810186,6.25913075478431,5.88667922227206,6.59058548203415,14.387812531497,8.81914456239784,7.18762821824858,3.52343472721246,1.45072428402269,2.35265659399725,17.4936416504444,31.805211833202,31.455997628924,13.3528864167335,11.6378015439847,10.775133859605,7.45457970552091,4.4464739805557,4.94944844504769,2.96659908770092,1.4209602298922,4.19440154725767,6.53171119046643,25.0928861786516,15.6606888464761,21.2428210964896,6.28432165688368,9.718215801871,26.70299422886,23.098758515395,13.7882817991503,33.0347642998166,45.0736303440713,50.3829429080479,18.3321939944969,21.4995962465663,27.0874952689515,25.684835908127,29.2636557216474,39.421947926417,20.3293723976831,26.338760947834,16.4031512326265,20.2946198132933,26.072188236841,21.4499721639242,14.6272059086836,6.11974200336975,14.5719861742211,18.8435161059824,16.5769948226014,15.870219474888,18.0656141932741,18.4448063268037,21.5537140451308,13.0984380392313,24.3820307087204,2.54805239706646,14.2213340630666,18.6182295269644,20.7755089689581,19.2099289105618,15.6431915215112,16.3130866697718,20.1881309128162,14.052311468057,20.3991870469135,20.9860102503013,20.0461111934988,17.7558947774914,21.1119873433855,19.5284024510155,18.5087176857487,4.42305275974937,2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| ||
|EntrezGene=78100 | |||
|HGNC= | |||
|MCL_coexpression_id=937 | |||
|UniProt=Q91YU3 | |||
|association_with_transcript=0bp_to_uc009obm.1_5end | |||
|description=CAGE_peak_1_at_8430410K20Rik_5end | |||
|id=chr9:4376533..4376600,+ | |||
|ontology_enrichment_celltype=CL:0000393!1.10e-07!39;CL:0000211!1.10e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.10e-07,39;CL:0000211,1.10e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.44e-16!63;UBERON:0002346!2.88e-15!71;UBERON:0003075!2.88e-15!71;UBERON:0007284!2.88e-15!71;UBERON:0000955!1.83e-14!50;UBERON:0006238!1.83e-14!50;UBERON:0004121!5.76e-14!102;UBERON:0000924!5.76e-14!102;UBERON:0006601!5.76e-14!102;UBERON:0003056!6.06e-14!49;UBERON:0000073!7.64e-14!75;UBERON:0001016!7.64e-14!75;UBERON:0002616!7.99e-14!49;UBERON:0001017!2.71e-13!73;UBERON:0005743!2.71e-13!73;UBERON:0004111!6.03e-12!122;UBERON:0000025!6.36e-12!114;UBERON:0003080!9.46e-12!40;UBERON:0001049!2.34e-11!52;UBERON:0005068!2.34e-11!52;UBERON:0006241!2.34e-11!52;UBERON:0007135!2.34e-11!52;UBERON:0002780!3.81e-11!39;UBERON:0001890!3.81e-11!39;UBERON:0006240!3.81e-11!39;UBERON:0002791!1.53e-09!29;UBERON:0003528!1.53e-09!29;UBERON:0001893!1.53e-09!29;UBERON:0000468!2.70e-08!333;UBERON:0002020!3.20e-08!34;UBERON:0004535!7.41e-08!23;UBERON:0001009!7.41e-08!23;UBERON:0000922!3.04e-07!328;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10;UBERON:0003103!4.72e-07!43;UBERON:0007100!5.13e-07!18;UBERON:0000948!5.13e-07!18;UBERON:0005498!5.13e-07!18;UBERON:0004140!5.13e-07!18;UBERON:0009881!5.13e-07!18;UBERON:0004141!5.13e-07!18;UBERON:0003084!5.13e-07!18;UBERON:0007005!5.13e-07!18;UBERON:0004139!5.13e-07!18;UBERON:0004291!5.13e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.04e-22,92;UBERON:0002346,5.33e-15,64;UBERON:0003075,5.33e-15,64;UBERON:0007284,5.33e-15,64;UBERON:0003056,6.06e-14,49;UBERON:0001016,7.64e-14,75;UBERON:0004121,2.10e-13,95;UBERON:0000924,2.10e-13,95;UBERON:0006601,2.10e-13,95;UBERON:0001017,2.71e-13,73;UBERON:0000955,1.29e-12,47;UBERON:0006238,1.29e-12,47;UBERON:0000073,1.34e-12,54;UBERON:0002616,5.33e-12,46;UBERON:0004111,6.03e-12,122;UBERON:0000025,6.36e-12,114;UBERON:0003080,9.46e-12,40;UBERON:0010371,1.96e-11,73;UBERON:0001049,2.34e-11,52;UBERON:0005068,2.34e-11,52;UBERON:0006241,2.34e-11,52;UBERON:0007135,2.34e-11,52;UBERON:0002780,3.81e-11,39;UBERON:0001890,3.81e-11,39;UBERON:0006240,3.81e-11,39;UBERON:0003528,1.53e-09,29;UBERON:0002791,1.53e-09,29;UBERON:0001893,1.53e-09,29;UBERON:0000922,1.83e-08,320;UBERON:0002020,3.20e-08,34;UBERON:0004535,7.41e-08,23;UBERON:0001009,7.41e-08,23;UBERON:0002021,4.60e-07,10;UBERON:0000411,4.60e-07,10;UBERON:0001950,4.60e-07,10;UBERON:0003103,4.72e-07,43;UBERON:0007100,5.13e-07,18;UBERON:0000948,5.13e-07,18;UBERON:0005498,5.13e-07,18;UBERON:0004140,5.13e-07,18;UBERON:0009881,5.13e-07,18;UBERON:0004141,5.13e-07,18;UBERON:0003084,5.13e-07,18;UBERON:0007005,5.13e-07,18;UBERON:0004139,5.13e-07,18;UBERON:0004291,5.13e-07,18 | |||
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| |||
|short_description=p1@8430410K20Rik | |||
}} |
Revision as of 17:53, 14 September 2013
Short description: | p1@8430410K20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_8430410K20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:937 |
Association with transcript: | 0bp_to_uc009obm.1_5end |
EntrezGene: | 8430410K20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.10e-07 | 39 |
electrically active cell | 1.10e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.