FFCP PHASE1:Hg19::chr10:72142364..72142395,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23421 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TCA0 | |||
|association_with_transcript=0bp_to_ENST00000357631,ENST00000358141,ENST00000446961,NM_018205,NM_018239,uc001jqy.1,uc001jqz.1_5end | |||
|description=CAGE_peak_1_at_LRRC20_5end | |||
|id=chr10:72142364..72142395,- | |||
|ontology_enrichment_celltype=CL:1000449!8.70e-08!16;CL:1000497!6.88e-07!18;CL:0002518!6.88e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.31e-08;15!CL:1000497;1.62e-07;17!CL:0002518;1.62e-07;17!CL:1000507;5.54e-07;10!CL:1000494;5.54e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.67e-08,15;CL:1000497,1.55e-07,17;CL:0002518,1.55e-07,17;CL:1000507,6.34e-07,10;CL:1000494,6.34e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.35e-23!312;UBERON:0000483!1.82e-22!309;UBERON:0000073!2.45e-21!94;UBERON:0001016!2.45e-21!94;UBERON:0003075!1.21e-20!86;UBERON:0007284!1.21e-20!86;UBERON:0002346!2.68e-20!90;UBERON:0005743!4.43e-20!86;UBERON:0001017!9.53e-20!82;UBERON:0000025!4.01e-18!194;UBERON:0000064!9.08e-18!219;UBERON:0000955!1.13e-16!69;UBERON:0006238!1.13e-16!69;UBERON:0001049!1.38e-16!57;UBERON:0005068!1.38e-16!57;UBERON:0006241!1.38e-16!57;UBERON:0007135!1.38e-16!57;UBERON:0000481!3.70e-16!347;UBERON:0001869!7.57e-16!32;UBERON:0001893!1.08e-15!34;UBERON:0004111!2.78e-15!241;UBERON:0002616!2.80e-15!59;UBERON:0002791!4.29e-15!33;UBERON:0002020!4.42e-15!34;UBERON:0003528!4.42e-15!34;UBERON:0003056!5.94e-15!61;UBERON:0000924!9.13e-15!173;UBERON:0006601!9.13e-15!173;UBERON:0004121!9.71e-15!169;UBERON:0000477!2.48e-14!286;UBERON:0000153!9.33e-14!129;UBERON:0007811!9.33e-14!129;UBERON:0002780!2.20e-13!41;UBERON:0001890!2.20e-13!41;UBERON:0006240!2.20e-13!41;UBERON:0000956!2.82e-13!25;UBERON:0000203!2.82e-13!25;UBERON:0000475!4.02e-13!365;UBERON:0003080!4.17e-13!42;UBERON:0000033!5.37e-13!123;UBERON:0002619!9.92e-12!22;UBERON:0001950!2.93e-11!20;UBERON:0007023!9.24e-09!115;UBERON:0003103!1.56e-08!69;UBERON:0006555!6.09e-08!17;UBERON:0005103!6.09e-08!17;UBERON:0000083!6.09e-08!17;UBERON:0009201!6.09e-08!17;UBERON:0004819!6.09e-08!17;UBERON:0006553!6.09e-08!17;UBERON:0003074!6.09e-08!17;UBERON:0003060!6.09e-08!17;UBERON:0004211!8.70e-08!16;UBERON:0001285!8.70e-08!16;UBERON:0007684!8.70e-08!16;UBERON:0003220!8.70e-08!16;UBERON:0004208!8.70e-08!16;UBERON:0005177!1.51e-07!107;UBERON:0000080!2.66e-07!18;UBERON:0002120!2.66e-07!18;UBERON:0004875!2.66e-07!18;UBERON:0005721!2.66e-07!18;UBERON:0005754!2.66e-07!18;UBERON:0007297!2.66e-07!18;UBERON:0003064!2.69e-07!37;UBERON:0001851!4.80e-07!16;UBERON:0004876!9.86e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.44e-15;32!UBERON:0001893;1.81e-14;34!UBERON:0002791;1.88e-14;32!UBERON:0000956;5.26e-14;25!UBERON:0000203;5.26e-14;25!UBERON:0003528;6.93e-14;34!UBERON:0002020;6.93e-14;34!UBERON:0002619;2.54e-12;22!UBERON:0001950;1.05e-11;20!UBERON:0002780;2.12e-10;41!UBERON:0001890;2.12e-10;41!UBERON:0000073;7.11e-10;53!UBERON:0002616;7.11e-10;53!UBERON:0000955;2.02e-08;68!UBERON:0006555;2.31e-08;15!UBERON:0004819;2.31e-08;15!UBERON:0001285;2.31e-08;15!UBERON:0007684;2.31e-08;15!UBERON:0000353;1.33e-07;15!UBERON:0001017;1.83e-07;75!UBERON:0001851;2.03e-07;15!UBERON:0004211;5.54e-07;10!UBERON:0009773;5.54e-07;10!UBERON:0001231;5.54e-07;10!UBERON:0004810;5.54e-07;10!UBERON:0001016;5.75e-07;83 | |||
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| |||
|short_description=p1@LRRC20 | |||
}} |
Revision as of 03:19, 11 January 2014
Short description: | p1@LRRC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC20_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357631, ENST00000358141, ENST00000446961, NM_018205, NM_018239, uc001jqy.1, uc001jqz.1_5end |
EntrezGene: | LRRC20 |
HGNC: | 23421 |
UniProt: | Q8TCA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.67e-08 | 15 |
kidney cell | 1.55e-07 | 17 |
kidney epithelial cell | 1.55e-07 | 17 |
kidney tubule cell | 6.34e-07 | 10 |
nephron tubule epithelial cell | 6.34e-07 | 10 |