FFCP PHASE1:Hg19::chr11:61722781..61722805,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12703 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=77bp_to_uc010rlv.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_BEST1_5end | |||
|id=chr11:61722781..61722805,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.35e-39!76;CL:0002194!5.33e-35!63;CL:0000576!5.33e-35!63;CL:0000040!5.33e-35!63;CL:0000559!5.33e-35!63;CL:0002009!2.61e-34!65;CL:0000557!2.22e-33!71;CL:0000839!4.62e-33!70;CL:0002057!5.99e-32!42;CL:0000860!2.50e-28!45;CL:0000763!1.56e-21!112;CL:0000049!1.56e-21!112;CL:0000738!2.21e-13!140;CL:0002087!1.08e-11!119;CL:0002031!4.35e-11!124;CL:0000037!1.12e-08!172;CL:0000566!1.12e-08!172;CL:0002032!2.07e-08!165;CL:0000837!2.07e-08!165;CL:0000988!5.55e-08!182;CL:0002393!3.73e-07!9;CL:0002397!3.73e-07!9;CL:0002320!7.85e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.00e-56;39!CL:0000234;7.00e-56;39!CL:0000860;1.28e-54;33!CL:0002057;1.28e-54;33!CL:0000576;2.09e-43;48!CL:0000766;1.85e-37;69!CL:0000763;1.14e-16;100!CL:0000235;3.07e-13;6!CL:0000738;3.04e-11;136!CL:0000094;1.85e-10;8!CL:0000081;1.69e-09;11!CL:0002087;2.29e-09;104!CL:0000775;2.80e-08;3!CL:0002393;3.57e-08;6!CL:0002397;3.57e-08;6!CL:0002619;4.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.56e-92,72;CL:0002194,5.62e-81,59;CL:0000576,5.62e-81,59;CL:0000040,5.62e-81,59;CL:0000559,5.62e-81,59;CL:0000473,1.17e-80,48;CL:0000234,1.17e-80,48;CL:0000839,1.32e-79,66;CL:0000557,3.40e-78,67;CL:0002009,7.45e-78,61;CL:0000860,1.66e-68,42;CL:0002057,1.66e-68,42;CL:0000763,4.27e-56,108;CL:0000049,4.27e-56,108;CL:0000738,9.21e-43,136;CL:0002031,7.15e-37,120;CL:0002087,4.36e-36,115;CL:0002032,4.66e-32,161;CL:0000837,4.66e-32,161;CL:0000037,2.32e-31,168;CL:0000988,4.60e-30,177;CL:0000134,1.90e-16,354;CL:0002320,9.44e-16,361;CL:0000219,2.59e-13,386;CL:0000235,3.58e-13,6;CL:0000048,1.65e-11,427;CL:0000723,4.40e-11,433;CL:0000034,1.56e-10,441;CL:0000094,1.99e-10,8;CL:0002393,6.47e-10,9;CL:0002397,6.47e-10,9;CL:0000081,2.15e-09,11;CL:0000775,2.81e-08,3;CL:0002619,3.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.84e-50;42!CL:0000049;4.63e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.45e-34!102;UBERON:0003061!9.45e-34!102;UBERON:0002193!1.47e-30!112;UBERON:0002371!7.42e-29!80;UBERON:0001474!8.45e-25!86;UBERON:0004765!9.17e-21!101;UBERON:0001434!9.17e-21!101;UBERON:0002204!2.89e-18!167;UBERON:0002405!9.09e-18!115;UBERON:0007023!6.33e-15!115;UBERON:0003081!2.93e-13!216;UBERON:0000468!1.24e-08!659;UBERON:0000479!2.80e-08!787;UBERON:0000467!2.21e-07!625;UBERON:0000480!2.88e-07!626;UBERON:0000923!2.94e-07!604;UBERON:0005291!2.94e-07!604;UBERON:0006598!2.94e-07!604;UBERON:0002532!2.94e-07!604;UBERON:0000926!3.16e-07!448;UBERON:0004120!3.16e-07!448;UBERON:0006603!3.16e-07!448;UBERON:0002050!3.82e-07!605;UBERON:0005423!3.82e-07!605;UBERON:0000178!6.92e-07!15;UBERON:0000179!6.92e-07!15;UBERON:0000463!6.92e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.09e-14;15!UBERON:0000179;9.09e-14;15!UBERON:0000463;9.09e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.97e-74,98;UBERON:0003061,2.97e-74,98;UBERON:0002193,2.86e-70,108;UBERON:0002371,3.88e-67,76;UBERON:0001474,4.18e-61,82;UBERON:0002405,2.31e-56,93;UBERON:0004765,2.64e-54,90;UBERON:0001434,2.49e-47,100;UBERON:0003081,1.60e-32,203;UBERON:0002204,1.95e-24,167;UBERON:0000926,1.08e-20,315;UBERON:0004120,1.08e-20,315;UBERON:0006603,1.08e-20,315;UBERON:0002384,8.35e-15,371;UBERON:0000178,8.79e-14,15;UBERON:0000179,8.79e-14,15;UBERON:0000463,8.79e-14,15;UBERON:0000923,6.94e-07,560;UBERON:0010316,6.94e-07,560;UBERON:0005291,6.94e-07,560;UBERON:0006598,6.94e-07,560;UBERON:0010317,6.94e-07,560;UBERON:0002532,6.94e-07,560 | |||
|phase1_expression=1.2717486548939,0.642301571672949,2.11431606143957,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0,2.16742572642506,0,0,0,0,0,0.293600439334847,1.66198622559563,2.20598892217156,2.82114131930607,4.47830948479849,4.53451132426571,2.57575567634187,7.26991193897824,7.935394817465,6.54976965207104,7.20530014407622,6.98985409637104,8.3620720141678,3.74000110018796,3.84241059793651,4.49316236788312,4.48169384957604,4.51839278508678,6.77132432971709,8.84738995850242,5.45812300115692,9.21366286224847,2.75475503133812,4.17207735198922,3.83602275479425,2.63881040149373,3.98927315243264,7.6720455095885,1.7412554317715,0.56738522469114,3.11411124497787,5.52747063564835,5.21482918420201,4.56096573880745,3.02699751316684,5.89244217580104,4.1140110367315,0.845021145247767,2.33864729961548,2.72556239160889,2.3589012540764,4.50530678524519,2.08943262706204,1.42506371870624,0.99458338599545,1.82664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.602300476311091,0.255973222308837,0,0.947109008176067,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0,0.589405839739707,0.364295288292542,0,1.29818957461873,2.08955684759121,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,23.2668158488995,0,0,0,1.98613771219828,0.573673241497627,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0.413303124703062,1.18800285728205,0,0,1.43723628363248,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0,0.300091096084402,0,0.772921620136887,0,0.168776332241266,0.194874010322397,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,3.69325509131096,7.02012795417713,5.94524649154913,0,0,0,0,0,0,0,0,1.86595303986695,1.15295962733569,1.00993946741104,0,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,1.62786481617433,0.823240336780769,0,0,0.791951872933429,0.602878754119172,0,0.299918973546171,3.64871341923571,4.01805673145701,14.7583757638122,0,1.14861935834114,0,0.579125226670317,0,1.96967059563885,0,0,0,0.128343036279748,0,0,0,0,0,38.1993582213063,35.899375104483,30.6667479942666,0.49076596687656,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,2.5885704098234,0.640365346820666,0,0,0,0.744323423456331,1.53461973288062,1.12264037773229,1.92208723883551,0.511707249066704,1.28683136914886,1.48418066444991,0,0.532685175939381,0,0.519254429183621,0,0,0,0.460404944679482,0.114814448164607,0.182091168006717,0.917870904715969,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0.275673144969061,0.751941714077915,0.580066775656914,0.255679882248303,0,0.330569830721956,0,0.127612712494584,0.10115778085555,0.929691098594572,0.31481234683064,0.6970372701606,0.616067160352178,0,0.869932992075073,0.18532421910392,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0,0.487426979262569,0,0,0.848432591722276,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.470719003883896,0,1.68471475667626,0,0,17.7606663231259,16.0573813499899,10.8232965563091,8.09988036556483,10.2840568271549,14.9148861574325,14.5808488054291,10.3106272918255,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0.687010689511529,0.307240764308458,0.447352215784832,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.562677665642051,0.111308705022906,0.16480387422676,0,0,0,0,0,0,0,0,0.179021174675609,0,0.493217028184668,2.3948309234694,0,0,0.649376687132959,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.844175070377856,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.265372693510018,0,0,0,0,1.01101699471016,0,0.468528891450678,0,0,0,0,1.20990716048664,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0.633107959558787,0,0.881747022766871,0.213452994739353,0.39961921916426,0,0,0.514784993585894,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0.837847203816763,0,0,0.199679000498991,0.858452096273142,0.446342914883745,0.268733889946905,0.720599767084807,0,0,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| |||
|short_description=p4@BEST1 | |||
}} |
Revision as of 08:04, 11 January 2014
Short description: | p4@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BEST1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 77bp_to_uc010rlv.1_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.97e-74 | 98 |
blood island | 2.97e-74 | 98 |
hemolymphoid system | 2.86e-70 | 108 |
bone marrow | 3.88e-67 | 76 |
bone element | 4.18e-61 | 82 |
immune system | 2.31e-56 | 93 |
skeletal element | 2.64e-54 | 90 |
skeletal system | 2.49e-47 | 100 |
lateral plate mesoderm | 1.60e-32 | 203 |
musculoskeletal system | 1.95e-24 | 167 |
mesoderm | 1.08e-20 | 315 |
mesoderm-derived structure | 1.08e-20 | 315 |
presumptive mesoderm | 1.08e-20 | 315 |
connective tissue | 8.35e-15 | 371 |
blood | 8.79e-14 | 15 |
haemolymphatic fluid | 8.79e-14 | 15 |
organism substance | 8.79e-14 | 15 |
germ layer | 6.94e-07 | 560 |
germ layer / neural crest | 6.94e-07 | 560 |
embryonic tissue | 6.94e-07 | 560 |
presumptive structure | 6.94e-07 | 560 |
germ layer / neural crest derived structure | 6.94e-07 | 560 |
epiblast (generic) | 6.94e-07 | 560 |