FFCP PHASE1:Hg19::chr11:102668200..102668228,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=4312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7155 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_AK225495_5end | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_4_at_MMP1_5end | |||
|id=chr11:102668200..102668228,- | |||
|ontology_enrichment_celltype=CL:0000192!5.74e-26!42;CL:0000514!5.74e-26!42;CL:0000359!1.03e-25!32;CL:0000055!2.87e-21!180;CL:0000187!7.70e-21!54;CL:0000183!1.00e-19!59;CL:0000680!3.09e-19!57;CL:0000056!3.09e-19!57;CL:0000355!3.09e-19!57;CL:0000222!1.91e-18!119;CL:0000393!8.45e-18!60;CL:0000211!8.45e-18!60;CL:0002139!1.98e-14!24;CL:0002539!1.12e-13!10;CL:0000220!1.24e-11!246;CL:0000057!2.07e-11!75;CL:0002321!2.10e-11!248;CL:0002371!8.41e-11!591;CL:0000071!1.71e-09!18;CL:0002546!1.71e-09!18;CL:0000548!1.79e-09!679;CL:0000004!1.79e-09!679;CL:0000255!1.79e-09!679;CL:0000012!2.71e-09!682;CL:0002494!3.55e-09!16;CL:0000048!4.52e-09!430;CL:0000144!4.55e-09!625;CL:0000723!4.68e-09!436;CL:1000413!9.45e-09!9;CL:0000034!1.70e-08!444;CL:0000115!1.72e-08!35;CL:0002594!5.30e-08!4;CL:1000306!1.38e-07!4;CL:0002547!1.38e-07!4;CL:0002544!1.52e-07!6;CL:0000003!4.95e-07!722;CL:0005020!7.84e-07!6;CL:0002138!7.84e-07!6;CL:0005022!7.84e-07!6;CL:0002592!9.26e-07!3;CL:0002595!9.45e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.01e-47;32!CL:0000192;5.74e-25;43!CL:0002539;6.46e-21;10!CL:0002139;1.53e-14;24!CL:0002594;2.52e-14;4!CL:0002544;6.57e-14;6!CL:0000071;1.79e-13;18!CL:1000413;6.71e-13;9!CL:0002494;1.03e-12;16!CL:0002595;2.56e-12;5!CL:0002592;6.83e-12;3!CL:0000187;9.43e-12;55!CL:0000393;5.10e-10;61!CL:0000211;5.10e-10;61!CL:0000115;1.80e-08;36!CL:0000569;2.13e-08;4!CL:0002593;2.20e-08;2!CL:1000306;2.88e-08;4!CL:0002547;2.88e-08;4!CL:0002583;2.37e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.07e-48,32;CL:0000192,1.07e-34,43;CL:0000514,1.07e-34,43;CL:0000187,7.88e-26,55;CL:0000680,3.45e-24,58;CL:0000056,3.45e-24,58;CL:0000355,3.45e-24,58;CL:0000222,5.43e-23,121;CL:0000393,1.04e-22,61;CL:0000211,1.04e-22,61;CL:0002539,5.66e-21,10;CL:0002139,2.13e-14,24;CL:0002594,2.40e-14,4;CL:0002544,7.34e-14,6;CL:0000071,2.45e-13,18;CL:0002546,2.45e-13,18;CL:1000413,8.25e-13,9;CL:0002494,1.00e-12,16;CL:0002595,2.64e-12,5;CL:0002592,6.84e-12,3;CL:0002321,1.69e-11,250;CL:0000115,7.51e-09,36;CL:0000569,2.21e-08,4;CL:0000011,2.21e-08,4;CL:1000306,2.27e-08,4;CL:0002547,2.27e-08,4;CL:0002593,2.28e-08,2;CL:0002583,2.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;5.74e-25;43!CL:0002546;1.79e-13;18!CL:0000355;1.73e-11;58!CL:0000011;2.13e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.57e-42!42;UBERON:0003509!1.57e-42!42;UBERON:0004572!1.57e-42!42;UBERON:0000055!5.39e-37!69;UBERON:0004573!9.19e-35!33;UBERON:0004571!9.19e-35!33;UBERON:0001981!5.75e-34!60;UBERON:0007500!5.75e-34!60;UBERON:0004537!5.75e-34!60;UBERON:0006965!5.75e-34!60;UBERON:0004872!4.38e-31!84;UBERON:0002049!1.86e-30!79;UBERON:0007798!1.86e-30!79;UBERON:0004535!1.51e-26!110;UBERON:0001009!2.04e-25!113;UBERON:0000947!5.72e-24!21;UBERON:0010191!5.72e-24!21;UBERON:0004290!9.24e-22!70;UBERON:0000486!2.86e-20!82;UBERON:0000914!3.57e-20!83;UBERON:0002329!3.57e-20!83;UBERON:0003077!3.57e-20!83;UBERON:0003059!3.57e-20!83;UBERON:0007282!3.57e-20!83;UBERON:0009618!3.57e-20!83;UBERON:0007285!3.57e-20!83;UBERON:0003914!4.39e-20!118;UBERON:0001134!2.36e-17!61;UBERON:0002036!2.36e-17!61;UBERON:0003082!2.36e-17!61;UBERON:0002385!1.66e-16!63;UBERON:0001015!1.66e-16!63;UBERON:0000383!1.66e-16!63;UBERON:0000490!5.07e-14!138;UBERON:0004237!1.12e-13!10;UBERON:0004695!1.12e-13!10;UBERON:0002111!1.12e-13!10;UBERON:0004178!1.12e-13!10;UBERON:0001135!7.00e-12!15;UBERON:0004111!4.17e-11!241;UBERON:0005256!3.44e-10!143;UBERON:0000477!7.31e-10!286;UBERON:0001986!1.71e-09!18;UBERON:0004638!1.71e-09!18;UBERON:0004852!1.71e-09!18;UBERON:0003915!9.45e-09!9;UBERON:0004700!9.45e-09!9;UBERON:0001917!9.45e-09!9;UBERON:0000483!1.52e-08!309;UBERON:0000119!2.67e-08!312;UBERON:0003102!2.71e-08!95;UBERON:0001310!5.30e-08!4;UBERON:0000415!1.38e-07!4;UBERON:0007240!1.38e-07!4;UBERON:0005742!1.38e-07!4;UBERON:0005734!1.38e-07!4;UBERON:0004664!1.38e-07!4;UBERON:0004663!1.38e-07!4;UBERON:0000025!1.84e-07!194;UBERON:0003081!2.47e-07!216;UBERON:0000487!2.86e-07!22;UBERON:0000467!4.33e-07!625;UBERON:0000480!4.91e-07!626;UBERON:0001621!9.26e-07!3;UBERON:0003834!9.45e-07!5;UBERON:0001533!9.45e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.74e-55;33!UBERON:0004571;1.74e-55;33!UBERON:0001637;1.06e-54;42!UBERON:0003509;1.06e-54;42!UBERON:0004572;1.06e-54;42!UBERON:0000947;9.30e-38;21!UBERON:0010191;9.30e-38;21!UBERON:0007500;8.04e-34;56!UBERON:0001981;8.04e-34;56!UBERON:0004537;8.04e-34;56!UBERON:0000055;1.02e-28;65!UBERON:0003914;5.37e-22;74!UBERON:0004237;6.46e-21;10!UBERON:0004695;6.46e-21;10!UBERON:0002111;6.46e-21;10!UBERON:0004178;6.46e-21;10!UBERON:0002049;6.99e-21;75!UBERON:0007798;6.99e-21;75!UBERON:0001310;2.52e-14;4!UBERON:0001009;1.29e-13;112!UBERON:0001135;1.76e-13;15!UBERON:0004638;1.79e-13;18!UBERON:0001986;1.79e-13;18!UBERON:0004852;1.79e-13;18!UBERON:0003915;6.71e-13;9!UBERON:0004700;6.71e-13;9!UBERON:0001917;6.71e-13;9!UBERON:0004535;6.78e-13;109!UBERON:0003834;2.56e-12;5!UBERON:0001533;2.56e-12;5!UBERON:0003498;6.83e-12;3!UBERON:0005985;6.83e-12;3!UBERON:0001621;6.83e-12;3!UBERON:0000025;6.53e-11;93!UBERON:0000487;1.01e-10;22!UBERON:0006914;3.07e-09;25!UBERON:0000948;7.19e-09;22!UBERON:0003513;8.70e-09;7!UBERON:0002456;2.20e-08;2!UBERON:0004797;2.88e-08;4!UBERON:0000415;2.88e-08;4!UBERON:0007240;2.88e-08;4!UBERON:0005742;2.88e-08;4!UBERON:0005734;2.88e-08;4!UBERON:0004664;2.88e-08;4!UBERON:0004663;2.88e-08;4!UBERON:0007100;1.21e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.68e-73,42;UBERON:0003509,6.68e-73,42;UBERON:0004572,6.68e-73,42;UBERON:0004573,1.02e-60,33;UBERON:0004571,1.02e-60,33;UBERON:0007500,3.56e-60,59;UBERON:0001981,3.56e-60,59;UBERON:0004537,3.56e-60,59;UBERON:0006965,3.56e-60,59;UBERON:0000055,1.25e-57,68;UBERON:0004872,2.07e-54,83;UBERON:0002049,4.78e-49,78;UBERON:0007798,4.78e-49,78;UBERON:0004535,9.93e-44,109;UBERON:0001009,2.76e-42,112;UBERON:0000947,7.15e-38,21;UBERON:0010191,7.15e-38,21;UBERON:0003914,9.74e-36,117;UBERON:0002329,1.24e-22,71;UBERON:0003059,1.24e-22,71;UBERON:0007282,1.24e-22,71;UBERON:0004290,1.24e-22,71;UBERON:0009618,1.24e-22,71;UBERON:0001134,2.99e-22,62;UBERON:0002036,2.99e-22,62;UBERON:0003082,2.99e-22,62;UBERON:0003077,3.14e-22,72;UBERON:0007285,3.14e-22,72;UBERON:0007524,7.74e-22,73;UBERON:0002385,2.26e-21,64;UBERON:0001015,2.26e-21,64;UBERON:0000383,2.26e-21,64;UBERON:0004237,5.66e-21,10;UBERON:0004695,5.66e-21,10;UBERON:0002111,5.66e-21,10;UBERON:0004178,5.66e-21,10;UBERON:0000490,4.71e-20,148;UBERON:0007503,4.94e-20,78;UBERON:0000486,1.90e-18,83;UBERON:0000025,7.55e-18,192;UBERON:0003081,1.49e-17,203;UBERON:0004111,2.95e-16,240;UBERON:0001310,2.40e-14,4;UBERON:0000926,3.47e-14,315;UBERON:0004120,3.47e-14,315;UBERON:0006603,3.47e-14,315;UBERON:0001135,1.62e-13,15;UBERON:0004638,2.45e-13,18;UBERON:0001986,2.45e-13,18;UBERON:0004852,2.45e-13,18;UBERON:0003915,8.25e-13,9;UBERON:0004700,8.25e-13,9;UBERON:0001917,8.25e-13,9;UBERON:0003834,2.64e-12,5;UBERON:0001533,2.64e-12,5;UBERON:0003498,4.90e-12,5;UBERON:0005985,4.90e-12,5;UBERON:0001621,6.84e-12,3;UBERON:0000483,1.10e-10,306;UBERON:0005256,1.29e-10,122;UBERON:0000487,1.30e-10,22;UBERON:0000119,1.74e-10,309;UBERON:0000948,3.66e-10,24;UBERON:0005498,3.66e-10,24;UBERON:0004140,3.66e-10,24;UBERON:0009881,3.66e-10,24;UBERON:0004141,3.66e-10,24;UBERON:0003084,3.66e-10,24;UBERON:0007005,3.66e-10,24;UBERON:0004139,3.66e-10,24;UBERON:0004291,3.66e-10,24;UBERON:0006914,3.81e-09,25;UBERON:0007100,7.60e-09,27;UBERON:0003513,8.88e-09,7;UBERON:0000415,2.27e-08,4;UBERON:0007240,2.27e-08,4;UBERON:0005742,2.27e-08,4;UBERON:0005734,2.27e-08,4;UBERON:0004664,2.27e-08,4;UBERON:0004663,2.27e-08,4;UBERON:0002456,2.28e-08,2;UBERON:0002204,5.81e-07,167;UBERON:0003104,9.16e-07,160;UBERON:0009142,9.16e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,3.01347264011988,2.92124036154949,4.87932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,3.37896092523399,3.4409383804245,1.04142150482278,2.26123176769604,0,0.275118041940067,2.08994966536811,0.516833518338658,2.84613010149368,2.00832367658802,1.20848795132744,0,0,0,3.24056779152704,0,0,0,3.06633274931766,0.949265659568129,3.11442964681692,0,0,0,0,5.44511200157693,0.794455084879313,2.86836620748814,2.83734705758686,1.12135520028461,0,2.96001058100592,0,0.134710672069688,0.326923806226917,0,0,0,1.24864030732128,0,0.149448680551801,0.939475989150119,0.809364721840658,0.702254033511242,2.04154171254893,1.22834317311768,0.516628905878827,0,0,0,0,0,0.500474079487857,2.21651292387346,0,0,0.150238058906597,0,0,0,0,0.600182192168805,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,4.69348596989448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.721832238805369,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,0,0,0,0,3.381211010224,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15893571323718,1.59805552781814,0.410635780069046,0.519254429183621,1.62694529843943,0,0.40101294060657,0.368323955743585,0,0,0,0,0,0,0,0,0,0.850468526382578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.2023155617111,0,0.94443704049192,2.0911118104818,2.7723022215848,4.7907542728532,3.47973196830029,10.1928320507156,0,0,0,0,0,0,0,10.20433232259,0.179872457583315,0,0.117812402345686,4.65019707618627,9.5106192703805,13.4802705996474,0,5.36169677188826,6.33900880540533,0.136499911407986,0.141405431953713,3.39024349860728,0,11.2784625791007,17.9764862954043,0,0,2.63783490051515,6.50629346009475,2.25356482025793,0,0,7.133421029625,0.354761064070598,0,0,0,0,0.48111056362756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7755776223568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,2.17199840701485,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909894705249887,0,6.11691131215246,0,0,0.149254802886874,0.233713309847224,0,0,0,0,1.37304041038154,0,3.26418121223839,14.933370148953,1.91156120596443,0.899606224327209,0.310525913752519,0,0.53168342911599,0,0,0,0.406870733204662,4.36436782086143,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,6.90359926060101,0,0,0,0,0,9.00745546305532,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,1.86123831398592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.808426818959282,0,0,0,0,0,0 | |||
|short_description=p4@MMP1 | |||
}} |
Revision as of 10:03, 11 January 2014
Short description: | p4@MMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_MMP1_5end |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | -48bp_to_AK225495_5end |
EntrezGene: | MMP1 |
HGNC: | 7155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data