FFCP PHASE1:Hg19::chr17:67323305..67323331,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35 | |||
|TSSclassifier=strong | |||
|UniProt=E7ETD3,Q8WWZ7 | |||
|association_with_transcript=0bp_to_ENST00000392677,NM_172232,uc002jig.2,uc002jih.2,uc010dfe.2_5end | |||
|description=CAGE_peak_2_at_ABCA5_5end | |||
|id=chr17:67323305..67323331,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.83e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-33!115;UBERON:0001049!1.23e-21!57;UBERON:0005068!1.23e-21!57;UBERON:0006241!1.23e-21!57;UBERON:0007135!1.23e-21!57;UBERON:0002616!6.25e-21!59;UBERON:0002780!2.21e-19!41;UBERON:0001890!2.21e-19!41;UBERON:0006240!2.21e-19!41;UBERON:0000955!8.73e-19!69;UBERON:0006238!8.73e-19!69;UBERON:0003080!2.77e-18!42;UBERON:0002020!7.80e-17!34;UBERON:0003528!7.80e-17!34;UBERON:0001893!1.20e-16!34;UBERON:0002346!2.78e-16!90;UBERON:0001869!3.65e-16!32;UBERON:0002791!5.08e-16!33;UBERON:0001017!5.70e-15!82;UBERON:0002619!1.62e-14!22;UBERON:0003075!1.87e-14!86;UBERON:0007284!1.87e-14!86;UBERON:0005743!4.44e-14!86;UBERON:0001950!2.36e-13!20;UBERON:0000153!3.15e-13!129;UBERON:0007811!3.15e-13!129;UBERON:0000956!1.33e-12!25;UBERON:0000203!1.33e-12!25;UBERON:0003056!1.85e-12!61;UBERON:0000033!2.39e-12!123;UBERON:0000073!1.04e-11!94;UBERON:0001016!1.04e-11!94;UBERON:0000924!2.83e-09!173;UBERON:0006601!2.83e-09!173;UBERON:0004121!4.24e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.41e-23;22!UBERON:0001869;3.65e-23;32!UBERON:0003528;3.72e-23;34!UBERON:0002020;3.72e-23;34!UBERON:0001893;9.27e-23;34!UBERON:0002791;1.15e-22;32!UBERON:0002780;7.42e-22;41!UBERON:0001890;7.42e-22;41!UBERON:0001950;1.33e-21;20!UBERON:0000956;8.68e-20;25!UBERON:0000203;8.68e-20;25!UBERON:0000073;3.47e-19;53!UBERON:0002616;3.47e-19;53!UBERON:0000955;7.39e-14;68!UBERON:0007023;1.27e-12;114!UBERON:0001017;1.69e-11;75!UBERON:0001016;9.05e-11;83!UBERON:0002420;6.74e-09;9!UBERON:0007245;6.74e-09;9!UBERON:0010009;6.74e-09;9!UBERON:0010011;6.74e-09;9!UBERON:0000454;6.74e-09;9!UBERON:0000125;7.81e-09;9!UBERON:0002308;7.81e-09;9!UBERON:0000200;6.52e-08;6!UBERON:0001871;2.92e-07;6!UBERON:0009663;6.01e-07;7!UBERON:0001872;9.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.97e-40,114;UBERON:0001049,5.03e-34,56;UBERON:0005068,5.03e-34,56;UBERON:0006241,5.03e-34,56;UBERON:0007135,5.03e-34,56;UBERON:0000073,1.45e-33,53;UBERON:0002616,1.45e-33,53;UBERON:0002780,1.50e-29,41;UBERON:0001890,1.50e-29,41;UBERON:0003080,1.50e-29,41;UBERON:0006240,1.50e-29,41;UBERON:0000955,2.41e-28,68;UBERON:0006238,2.41e-28,68;UBERON:0003528,9.92e-27,34;UBERON:0002020,9.92e-27,34;UBERON:0001893,2.03e-26,34;UBERON:0002346,1.04e-25,86;UBERON:0001869,1.35e-25,32;UBERON:0001017,1.90e-25,81;UBERON:0002791,8.26e-25,32;UBERON:0002619,2.34e-23,22;UBERON:0003075,1.27e-22,82;UBERON:0007284,1.27e-22,82;UBERON:0001016,5.99e-22,89;UBERON:0001950,2.15e-21,20;UBERON:0003056,1.04e-19,61;UBERON:0000956,1.33e-19,25;UBERON:0000203,1.33e-19,25;UBERON:0010371,7.30e-18,104;UBERON:0004121,7.38e-14,171;UBERON:0000924,7.38e-14,171;UBERON:0006601,7.38e-14,171;UBERON:0010314,6.72e-13,132;UBERON:0011216,7.72e-13,223;UBERON:0002420,1.29e-08,9;UBERON:0007245,1.29e-08,9;UBERON:0010009,1.29e-08,9;UBERON:0010011,1.29e-08,9;UBERON:0000454,1.29e-08,9;UBERON:0000125,1.45e-08,9;UBERON:0002308,1.45e-08,9;UBERON:0000200,9.88e-08,6;UBERON:0001871,3.16e-07,6;UBERON:0001872,9.00e-07,5 | |||
|phase1_expression=0,0,0.563817616383885,1.0007329835313,0.893922188854576,0,0,0,0.522371256399677,0,0,0,0.527533956456907,0,0.662794751455832,0,0,1.46062018077475,0.975865597581014,0,0.408001382488506,0.313454721478088,0.572471974262113,0.136874425072884,0.125542639594803,0.993374274723366,0.738905305049512,1.18066171970519,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0.284338464974843,0.293600439334847,0,0.401088894940283,0.217010870715852,0.895661896959697,1.29557466407592,1.03030227053675,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0,0,1.03423704220986,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,1.12101712596307,0.790152254325231,1.7703879310245,1.57204305099666,1.23360899399706,0.668745981562712,0,0.946895611469467,0,0.111410456885174,0,0.221533894583621,1.08321545506006,0.512365278902701,0.650296737799391,0.657751618414705,1.10540007114339,0,0.14828656316206,1.60524496853828,0,0.566546713487831,0.766440987203842,0.34362744548263,0.253019692019503,0.637130828648193,0,0.950452044448374,0.150575119077773,1.15187950038977,1.24930726552346,0.473554504088034,0.821127996921047,0.604820229674197,1.33720097891754,1.44824403882799,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.567208902984407,0,0.43917392846563,2.94702919869853,0.728590576585084,0,3.8945687238562,2.61194605948901,0.797747763113191,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0,0.417989933073621,1.29208379584664,1.42306505074684,1.67360306382335,0.805658634218294,0,0.732186172644509,0.367663080345869,0,1.07159673940896,0.898117490504679,0.900891843866578,0,0,0.183201743930407,0,3.87780264148325,0,0,0.379891534993739,0.529636723252875,0.573673241497627,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,0.808264032418128,0.653847612453835,0.454072282934794,1.72852777344,0,0,0,0.149448680551801,0,0.647491777472526,0,0,0.245668634623536,0.309977343527296,0,0.741800787835671,0,0,0.168336113954066,0,0,0,0,0.45071417671979,0.226864366320042,0.179389635688862,0.85422955527427,1.05965950579781,0,0.206105058476878,1.54584324027377,0.558350568994769,0.168776332241266,0.194874010322397,0.504867548488229,1.10459878370759,2.10139873864455,0,0.201504196455281,0,0.773043412653187,1.09098448236334,0.573609190778008,0.121973706129595,0,0.232387885739037,0.414644220061482,0,0.36497735907583,1.56449532329816,0.643240938192885,0,1.39310378409594,0.721879481669586,0.236613600079688,0.842923450390509,1.68707720918437,0.441175890929576,0.871517776369625,0.474541238222193,1.21348177344148,1.37355025587742,0,0,0,0,0,3.80265104465493,5.89696330006576,2.36315962672562,0,0.245976877086227,0.514703430895577,0.219500570817251,0,0,0.277765335475589,0,0,1.44331342025273,0.34779121492523,0.469634776943287,0.866198686566443,0,0,0.790204397959275,1.71697232418975,0.492434012174795,0.936017060556951,0.445893486866185,0,0.335964256397719,0.425325291727159,0.985143749731331,0.581267877027924,0.383382679165211,1.47798971368783,0.616339038092582,1.03664057770386,1.15295962733569,0.88369703398466,0.825472625798197,0.381988425558278,1.17217447210047,0,0.514137463516618,0,3.42991719156694,0,0.87192013766656,0.2933531432838,1.29271715757778,3.57656445851882,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.714889968290738,0.542621605391443,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,1.19812427745791,1.14861935834114,0,0.434343920002738,0.410952645100767,0.716243852959582,0.224170287987055,0,1.07813787429759,1.66845947163673,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0.49076596687656,0,0.542530047399471,1.24782516918484,0.892144943985809,2.52323864054295,0.819989904948992,0.601892199455438,0,1.03473071292505,0.664225598535437,0.368738337083406,1.04260337361699,0.195801157462741,0.686286847621712,0.82707210449155,0.647142602455851,1.28073069364133,0,0,0,0.992431231275107,0.460385919864187,0.561320188866147,0.768834895534206,1.53512174720011,0.482561763430822,0,0,0,0.0821271560138091,0,0,0.241718899183244,0.802025881213139,0.460404944679482,0.114814448164607,0.728364672026868,0.655622074797121,0,0.15403067420883,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0,0.657779629937804,0.522870902049801,0.256450125116389,0,0,1.854738209659,1.28197250745681,1.56768049849117,0,0,1.6068392984416,0.096670718292122,0.616194468458578,0.614014698904518,0,0.751941714077915,0.725083469571143,0.255679882248303,0.178064071293475,0.330569830721956,0.384380134730212,0.765676274967505,0.6069466851333,0,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0.744316738719335,0.949138274156178,0.190630193923825,0,0,0,0,0.539617372749944,0.54907405947211,0.589062011728432,0,0,0,0,0,1.05650146756755,0.9554993798559,0.707027159768564,0,0,0,0,0,0,0,0,0,0.717056761020258,0.294747123039363,0,0.354761064070598,0,0,0,0.349934720244983,0.192444225451024,0,0,2.35359501941948,0,0,0,0,0,0.764637207142375,0.569647187174163,0.714695326373367,0,1.29694662238543,2.16012574895246,0.79312517629427,2.02965735142199,0,0,0,0.144269212976445,0.569134746787313,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,2.12923118845163,0.343505344755765,0.614481528616916,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0.748562161632879,2.05111450980652,0.606802608747567,0,1.13654458722565,0.71623345421307,0.890894042497916,2.45728561679386,3.97659059106519,3.09472716103128,0.222617410045812,0,0,0.597743964753209,1.93398740871803,2.26739473068848,0.102268682502155,3.07712013652674,0.311039587661807,0.269605053441981,0,0.511572370226872,0.591860433821602,0,0,4.84666373047609,1.85536196323703,1.99613798001194,0.260427761085233,0.262379999988587,0,0.455173793141999,0.254253650292766,0.709163045303809,0.689486746482929,4.37406920074882,2.2571249341328,2.65722415744152,2.53252521113357,10.6807215421958,6.63475559587348,4.72876190325676,2.19385397153973,0.32681539055697,2.78847488557207,0.846452843541768,0.227884111694002,0.46112780877612,0.179515288819544,0.325942115766024,1.27600463892768,0.274792780205587,1.5991043280559,0,0.156980256395025,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0,0.632994193584081,0,0.282706142867882,0.649165919226273,3.98104772431402,0.973033209536731,1.22206028986725,0.593042257361244,0.494255755786011,0,1.41542379259422,0.802577647298789,3.51396668588009,0,0.391329237864179,0.242780379534093,2.36750641709634,1.20990716048664,1.53036380815245,1.39010475182674,1.50323419414493,0.414752765588989,0,0,0.313932918407225,0,0,0,0.520679215005393,0.195984794828755,0.522355239482415,0.17472666824203,1.37588825977293,0,0.0730893170861856,0,1.16386819786103,0.353024506766001,0.90392296312213,0.137041924646751,0.397429223405979,4.68499890073502,0,0.400794101257669,0.426905989478705,0.19980960958213,0,2.40526851948423,1.71594997861965,0,0.99402028452346,0.235694034616795,0,0,0,0,3.60252173225874,1.23214841002794,1.27746588066972,0,0.788662062837943,1.11712960508902,0.458320848023367,0,1.39775300349294,0.858452096273142,0.669514372325618,1.07493555978762,0.720599767084807,0,0.0787831823072236,0.494495150286999,0.26961417541674,0.295282444544246,0,6.36183751847443,2.31545790389679,0.160753148465019,0,0,2.0247650239635,3.0952078182318,4.9207140893,0.670869375198532,1.10327990218877,1.36381929150995,0.211200673038813,0.179287339332845,1.53532157855556,1.42939065274673,1.32418394073086,0,0,0,0,1.19730191562487,0,0,0.453248366080503,1.46552233678082,2.65013777824443,4.52490347265427,2.38018683136842,0.513260513652988,0,0.747511887973863,2.20086027139532,2.48543433208317,1.48849806543585,0.790446527591777,0.365377795142688,0,2.1760712134779,2.2562090462043,1.22538230705385,2.95085367638824,1.25643277000187,8.86068179966986,3.41673541725497,3.1297732676625,0.573409195690071,1.77486482458964,3.22901295295194,0.553394539744923,0.999843263696853,1.51649117541648,1.14186133417987,0,0.468334905806882,0.579684114443301,0.149254802886874,0.934853239388898,0,0.189403005275089,0.50313580350515,0,0.228840068396924,0,0.15543720058278,0,0.63718706865481,0.899606224327209,0.465788870628778,0.414706207840855,0.265841714557995,0,0.300515217994437,0.380805212168795,0,0.909243296012797,0.214821114084977,0,0.796191777397232,0,0,0.336749488765919,0,0.192619830407303,0,0,0.680117776536817,0.694567422971502,1.22368352253234,0.179088841081487,0.308801447160972,0.438568099157414,0.706756583783524,0.38582807654183,0,0.256241518587947,0.345430341731199,0.607719912354764,3.17994403148981,5.45608864750288,1.59437808376036,5.23409261618701,0.655219697692825,0.245772908753719,0.211312123358627,0,0.213383459388282,0,0,0.736423801007363,0.559518030877778,0.622077260032973,0.895260599125562,0,0.157265941855896,0,1.3578602396322,2.55089904122019,8.42763196961215,0,1.27201740261367,0.394308725006267,1.60114149657094,0.352675943690684,0.6124909547064,3.27569047991944,7.08482881627925,3.03304332208587,3.48697819209284,2.01657356977374,3.73449163306777,3.55246420390072,0,0.588886311006154,0.707818340086442,0.366857197043358,0.693153996902029,0,0,1.5913297769302,0.676892955143315,1.0085253435176,4.68908406739856,0.261906694481422,0.49131575253029,0.295712172434091,4.11979266172207,3.90539049306924,4.96048311602842,3.61470118105269,3.28184885410932,1.64477330057155,0.496211178389294,17.5871244359621,0.255524855279191,3.74991285114801,3.69912094440706,15.7811057101524,9.3341498454032,0.975726071789027,1.15233987555779,0.685952037749674,4.89382077433188,4.01213918733379,0.472775363535873,0.444925607568277,1.02041020705668,2.19961825882403,0.560544326627578,0,1.07963795609311,0.47775168788705,4.14563956224607,1.10609528212909,0.464965701472501,0.695433089210318,0,1.65772931330429,1.19502933965765,2.07377898544228,2.58136415292167,0.236664001461131,0.170426809518315,2.9637093513365,1.8328549483524,0.93061915699296,0.955538938977433,0.671132590786754,0.785201868921944,0.243835849964539,7.76914604625474,6.05710560451857,0,0.485710993059139,3.9769708788558,1.19370465096821,2.85408217866165,0.67767649223376,10.2244680573249,0.905777061400041,2.08370226891451,2.18559560503957,1.88126918544609,1.22574160876953,1.41405928260976,1.57046773691956,1.78227840196252,0.4226557275834,0.679708458751268,0.469919589899268,0.580120991762195,2.29864658627337,0.535661815816973,0,0.0802413666891683,0,0.458729283404541,1.00337708206016,1.41994405973866,2.44769364687293,1.74540276136151,3.7031878836078,0.743990036333503,0,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,2.57647573942014,4.01946195234268,0.829169439458779,0.310298987585686,1.49263787330687,3.09483760902862,0.645889098360061,0.993195428733726,0.112131862580613,1.33659032384146,2.22328907854041,1.08858373948481,0.342233301085281,1.27968900727716,2.07994395638761,0.99798106963804,0.814032686109745,0.747091421144008,0,0.269475606319761,0,1.58913877437726,0.813792356631477,0.665756774185513,0.603821380773079,3.20568492303233 | |||
|short_description=p2@ABCA5 | |||
}} |
Revision as of 17:03, 20 January 2014
Short description: | p2@ABCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392677, NM_172232, uc002jig.2, uc002jih.2, uc010dfe.2_5end |
EntrezGene: | ABCA5 |
HGNC: | 35 |
UniProt: | E7ETD3Q8WWZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data